RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 PCDHB18PQ96TA0 734 aa4.41□□□□□ -1.7
SF3B1-212ENST00000496458 SPXQ9BT56 116 aa4.41□□□□□ -1.7
SF3B1-212ENST00000496458 C1orf21Q9H246 121 aa4.41□□□□□ -1.7
SF3B1-212ENST00000496458 THAP9Q9H5L6 903 aa4.41□□□□□ -1.7
SF3B1-212ENST00000496458 PFDN4Q9NQP4 134 aa4.41□□□□□ -1.7
SF3B1-212ENST00000496458 TMOD3Q9NYL9 352 aa4.41□□□□□ -1.7
SF3B1-212ENST00000496458 KDM6BO15054 1643 aa4.41□□□□□ -1.7
SF3B1-212ENST00000496458 MAGI3Q5TCQ9 1506 aa4.41□□□□□ -1.7
SF3B1-212ENST00000496458 TTC37Q6PGP7 1564 aa4.4□□□□□ -1.7
SF3B1-212ENST00000496458 KIF14Q15058 1648 aa4.4□□□□□ -1.7
SF3B1-212ENST00000496458 KRT87PA6NCN2 255 aa4.4□□□□□ -1.71
SF3B1-212ENST00000496458 NPIPA3F8WFD2 350 aa4.4□□□□□ -1.71
SF3B1-212ENST00000496458 PHOX2AO14813 284 aa4.4□□□□□ -1.71
SF3B1-212ENST00000496458 INPP4BO15327 924 aa4.4□□□□□ -1.71
SF3B1-212ENST00000496458 MLNRO43193 412 aa4.4□□□□□ -1.71
SF3B1-212ENST00000496458 C9P02748 559 aa4.4□□□□□ -1.71
SF3B1-212ENST00000496458 CD1DP15813 335 aa4.4□□□□□ -1.71
SF3B1-212ENST00000496458 IL10P22301 178 aa4.4□□□□□ -1.71
SF3B1-212ENST00000496458 TNNT2P45379 298 aaPredicted RBP4.4□□□□□ -1.71
SF3B1-212ENST00000496458 GPC3P51654 580 aa4.4□□□□□ -1.71
SF3B1-212ENST00000496458 TKTL1P51854 596 aa4.4□□□□□ -1.71
SF3B1-212ENST00000496458 PTENP60484 403 aa4.4□□□□□ -1.71
SF3B1-212ENST00000496458 REG3GQ6UW15 175 aa4.4□□□□□ -1.71
SF3B1-212ENST00000496458 TMEM182Q6ZP80 229 aaPredicted RBP4.4□□□□□ -1.71
SF3B1-212ENST00000496458 Q6ZVQ6 151 aa4.4□□□□□ -1.71
SF3B1-212ENST00000496458 Q71RC1 249 aaPredicted RBP4.4□□□□□ -1.71
SF3B1-212ENST00000496458 PPP1R42Q7Z4L9 355 aa4.4□□□□□ -1.71
SF3B1-212ENST00000496458 CARM1Q86X55 608 aa4.4□□□□□ -1.71
SF3B1-212ENST00000496458 TUSC5Q8IXB3 177 aa4.4□□□□□ -1.71
SF3B1-212ENST00000496458 C4orf32Q8N8J7 132 aa4.4□□□□□ -1.71
SF3B1-212ENST00000496458 RTL3Q8N8U3 475 aaKnown RBP4.4□□□□□ -1.71
SF3B1-212ENST00000496458 ZBTB44Q8NCP5 570 aa4.4□□□□□ -1.71
SF3B1-212ENST00000496458 IPMKQ8NFU5 416 aa4.4□□□□□ -1.71
SF3B1-212ENST00000496458 NCOA7Q8NI08 942 aa4.4□□□□□ -1.71
SF3B1-212ENST00000496458 OCC1Q8TAD7 63 aa4.4□□□□□ -1.71
SF3B1-212ENST00000496458 TYMSOSQ8TAI1 123 aa4.4□□□□□ -1.71
SF3B1-212ENST00000496458 FBXO30Q8TB52 745 aa4.4□□□□□ -1.71
SF3B1-212ENST00000496458 SETD6Q8TBK2 473 aa4.4□□□□□ -1.71
SF3B1-212ENST00000496458 CFAP53Q96M91 514 aa4.4□□□□□ -1.71
SF3B1-212ENST00000496458 PNNQ9H307 717 aaKnown RBP4.4□□□□□ -1.71
SF3B1-212ENST00000496458 C5orf66Q9H5L9 145 aa4.4□□□□□ -1.71
SF3B1-212ENST00000496458 CHCHD3Q9NX63 227 aaKnown RBP4.4□□□□□ -1.71
SF3B1-212ENST00000496458 AKAP7Q9P0M2 348 aaPredicted RBP4.4□□□□□ -1.71
SF3B1-212ENST00000496458 DBF4Q9UBU7 674 aaPredicted RBP4.4□□□□□ -1.71
SF3B1-212ENST00000496458 HOOK1Q9UJC3 728 aaKnown RBP4.4□□□□□ -1.71
SF3B1-212ENST00000496458 PLCH2O75038 1416 aa4.39□□□□□ -1.71
SF3B1-212ENST00000496458 AKNAQ7Z591 1439 aa4.39□□□□□ -1.71
SF3B1-212ENST00000496458 FANCAO15360 1455 aa4.39□□□□□ -1.71
SF3B1-212ENST00000496458 MYO5CQ9NQX4 1742 aa4.39□□□□□ -1.71
SF3B1-212ENST00000496458 A0A087WV48 116 aa4.39□□□□□ -1.71
SF3B1-212ENST00000496458 TRAV34A0A0B4J273 112 aa4.39□□□□□ -1.71
SF3B1-212ENST00000496458 A4D1N5 150 aa4.39□□□□□ -1.71
SF3B1-212ENST00000496458 TMEM110-MUSTN1A8MSY1 372 aa4.39□□□□□ -1.71
SF3B1-212ENST00000496458 A8MU76 341 aa4.39□□□□□ -1.71
SF3B1-212ENST00000496458 TCP10L2B9ZVM9 353 aa4.39□□□□□ -1.71
SF3B1-212ENST00000496458 MOCS2O96007 188 aaPredicted RBP4.39□□□□□ -1.71
SF3B1-212ENST00000496458 GBAP04062 536 aa4.39□□□□□ -1.71
SF3B1-212ENST00000496458 DNAH10OSP0CZ25 163 aa4.39□□□□□ -1.71
SF3B1-212ENST00000496458 LMO2P25791 158 aa4.39□□□□□ -1.71
SF3B1-212ENST00000496458 OR3A3P47888 321 aa4.39□□□□□ -1.71
SF3B1-212ENST00000496458 HTD2P86397 168 aa4.39□□□□□ -1.71
SF3B1-212ENST00000496458 RPA4Q13156 261 aa4.39□□□□□ -1.71
SF3B1-212ENST00000496458 MEP1BQ16820 701 aa4.39□□□□□ -1.71
SF3B1-212ENST00000496458 TOR1AIP1Q5JTV8 583 aa4.39□□□□□ -1.71
SF3B1-212ENST00000496458 GLRA4Q5JXX5 417 aa4.39□□□□□ -1.71
SF3B1-212ENST00000496458 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.39□□□□□ -1.71
SF3B1-212ENST00000496458 FAM91A1Q658Y4 838 aa4.39□□□□□ -1.71
SF3B1-212ENST00000496458 TXNRD3NBQ6F5E7 133 aa4.39□□□□□ -1.71
SF3B1-212ENST00000496458 C15orf52Q6ZUT6 534 aaKnown RBP4.39□□□□□ -1.71
SF3B1-212ENST00000496458 SPATA21Q7Z572 469 aa4.39□□□□□ -1.71
SF3B1-212ENST00000496458 C11orf53Q8IXP5 236 aa4.39□□□□□ -1.71
SF3B1-212ENST00000496458 CCDC114Q96M63 670 aa4.39□□□□□ -1.71
SF3B1-212ENST00000496458 TAAR6Q96RI8 345 aa4.39□□□□□ -1.71
SF3B1-212ENST00000496458 NACAP1Q9BZK3 213 aa4.39□□□□□ -1.71
SF3B1-212ENST00000496458 STRADBQ9C0K7 418 aa4.39□□□□□ -1.71
SF3B1-212ENST00000496458 LMAN1LQ9HAT1 526 aa4.39□□□□□ -1.71
SF3B1-212ENST00000496458 KCNK13Q9HB14 408 aa4.39□□□□□ -1.71
SF3B1-212ENST00000496458 CTNNA3Q9UI47 895 aa4.39□□□□□ -1.71
SF3B1-212ENST00000496458 CCNB3Q8WWL7 1395 aa4.39□□□□□ -1.71
SF3B1-212ENST00000496458 ADAMTS9Q9P2N4 1935 aa4.38□□□□□ -1.71
SF3B1-212ENST00000496458 CDC42BPBQ9Y5S2 1711 aa4.38□□□□□ -1.71
SF3B1-212ENST00000496458 ARHGAP5Q13017 1502 aa4.38□□□□□ -1.71
SF3B1-212ENST00000496458 TRGV8A0A0C4DH27 118 aa4.38□□□□□ -1.71
SF3B1-212ENST00000496458 ZNF840PA6NDX5 716 aa4.38□□□□□ -1.71
SF3B1-212ENST00000496458 LMO7DNF2Z398 122 aa4.38□□□□□ -1.71
SF3B1-212ENST00000496458 K7EQG2 157 aa4.38□□□□□ -1.71
SF3B1-212ENST00000496458 SP9P0CG40 484 aa4.38□□□□□ -1.71
SF3B1-212ENST00000496458 DLATP10515 647 aaKnown RBP4.38□□□□□ -1.71
SF3B1-212ENST00000496458 KRT13P13646 458 aa4.38□□□□□ -1.71
SF3B1-212ENST00000496458 ADRA2CP18825 462 aa4.38□□□□□ -1.71
SF3B1-212ENST00000496458 RIDAP52758 137 aaKnown RBP4.38□□□□□ -1.71
SF3B1-212ENST00000496458 NAGLUP54802 743 aa4.38□□□□□ -1.71
SF3B1-212ENST00000496458 SLC26A5P58743 744 aa4.38□□□□□ -1.71
SF3B1-212ENST00000496458 ACY1Q03154 408 aa4.38□□□□□ -1.71
SF3B1-212ENST00000496458 KNOP1Q1ED39 458 aaKnown RBP4.38□□□□□ -1.71
SF3B1-212ENST00000496458 KBTBD12Q3ZCT8 623 aa4.38□□□□□ -1.71
SF3B1-212ENST00000496458 ZRANB3Q5FWF4 1079 aa4.38□□□□□ -1.71
SF3B1-212ENST00000496458 SHEQ5VZ18 495 aa4.38□□□□□ -1.71
SF3B1-212ENST00000496458 LINC00696Q6ZRV3 163 aa4.38□□□□□ -1.71
SF3B1-212ENST00000496458 ANKRD20A12PQ8NF67 263 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms