RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 ZSCAN32Q9NX65 697 aa10.53□□□□□ -0.72
CMSS1-208ENST00000496116 WDR37Q9Y2I8 494 aa10.53□□□□□ -0.72
CMSS1-208ENST00000496116 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.53□□□□□ -0.72
CMSS1-208ENST00000496116 PCDHGA2Q9Y5H1 932 aa10.53□□□□□ -0.72
CMSS1-208ENST00000496116 CKAP5Q14008 2032 aa10.52□□□□□ -0.72
CMSS1-208ENST00000496116 OR2A25A4D2G3 310 aa10.52□□□□□ -0.72
CMSS1-208ENST00000496116 CLCA1A8K7I4 914 aa10.52□□□□□ -0.72
CMSS1-208ENST00000496116 ZBTB11O95625 1053 aaPredicted RBP10.52□□□□□ -0.72
CMSS1-208ENST00000496116 SERPIND1P05546 499 aa10.52□□□□□ -0.72
CMSS1-208ENST00000496116 DRD2P14416 443 aa10.52□□□□□ -0.72
CMSS1-208ENST00000496116 EN2P19622 333 aaPredicted RBP10.52□□□□□ -0.72
CMSS1-208ENST00000496116 GANABQ14697 944 aaKnown RBP10.52□□□□□ -0.72
CMSS1-208ENST00000496116 MLC1Q15049 377 aa10.52□□□□□ -0.72
CMSS1-208ENST00000496116 DUSP7Q16829 419 aa10.52□□□□□ -0.72
CMSS1-208ENST00000496116 TMEM35AQ53FP2 167 aa10.52□□□□□ -0.72
CMSS1-208ENST00000496116 COLEC12Q5KU26 742 aa10.52□□□□□ -0.72
CMSS1-208ENST00000496116 UBE2UQ5VVX9 321 aa10.52□□□□□ -0.72
CMSS1-208ENST00000496116 Q6ZPB1 254 aaPredicted RBP10.52□□□□□ -0.72
CMSS1-208ENST00000496116 FAM92BQ6ZTR7 304 aa10.52□□□□□ -0.72
CMSS1-208ENST00000496116 SLCO6A1Q86UG4 719 aa10.52□□□□□ -0.72
CMSS1-208ENST00000496116 OR9Q2Q8NGE9 314 aa10.52□□□□□ -0.72
CMSS1-208ENST00000496116 RHOXF1Q8NHV9 184 aa10.52□□□□□ -0.72
CMSS1-208ENST00000496116 GANCQ8TET4 914 aa10.52□□□□□ -0.72
CMSS1-208ENST00000496116 ABTB1Q969K4 478 aaPredicted RBP10.52□□□□□ -0.72
CMSS1-208ENST00000496116 TMEM19Q96HH6 336 aa10.52□□□□□ -0.72
CMSS1-208ENST00000496116 CAMK1GQ96NX5 476 aa10.52□□□□□ -0.72
CMSS1-208ENST00000496116 ALPK1Q96QP1 1244 aa10.52□□□□□ -0.72
CMSS1-208ENST00000496116 SIGLEC11Q96RL6 698 aa10.52□□□□□ -0.72
CMSS1-208ENST00000496116 ZNF607Q96SK3 696 aa10.52□□□□□ -0.72
CMSS1-208ENST00000496116 MAPKAP1Q9BPZ7 522 aa10.52□□□□□ -0.72
CMSS1-208ENST00000496116 FAIM2Q9BWQ8 316 aa10.52□□□□□ -0.72
CMSS1-208ENST00000496116 C1QTNF7Q9BXJ2 289 aa10.52□□□□□ -0.72
CMSS1-208ENST00000496116 ITPAQ9BY32 194 aa10.52□□□□□ -0.72
CMSS1-208ENST00000496116 LMAN2LQ9H0V9 348 aa10.52□□□□□ -0.72
CMSS1-208ENST00000496116 ABCG4Q9H172 646 aa10.52□□□□□ -0.72
CMSS1-208ENST00000496116 LHX9Q9NQ69 397 aa10.52□□□□□ -0.72
CMSS1-208ENST00000496116 SERGEFQ9UGK8 458 aa10.52□□□□□ -0.72
CMSS1-208ENST00000496116 PSORS1C1Q9UIG5 152 aa10.52□□□□□ -0.72
CMSS1-208ENST00000496116 PNMA8BQ9ULN7 279 aaPredicted RBP10.52□□□□□ -0.72
CMSS1-208ENST00000496116 ATG2AQ2TAZ0 1938 aa10.52□□□□□ -0.73
CMSS1-208ENST00000496116 HEATR5BQ9P2D3 2071 aa10.52□□□□□ -0.73
CMSS1-208ENST00000496116 CLDN24A6NM45 220 aa10.52□□□□□ -0.73
CMSS1-208ENST00000496116 PCDH17O14917 1159 aa10.52□□□□□ -0.73
CMSS1-208ENST00000496116 TMPRSS11DO60235 418 aa10.52□□□□□ -0.73
CMSS1-208ENST00000496116 KDM1AO60341 852 aa10.52□□□□□ -0.73
CMSS1-208ENST00000496116 MPZL2O60487 215 aa10.52□□□□□ -0.73
CMSS1-208ENST00000496116 TFPTP0C1Z6 253 aa10.52□□□□□ -0.73
CMSS1-208ENST00000496116 SSR2P43308 183 aa10.52□□□□□ -0.73
CMSS1-208ENST00000496116 CCT3P49368 545 aaKnown RBP10.52□□□□□ -0.73
CMSS1-208ENST00000496116 CDC42P60953 191 aa10.52□□□□□ -0.73
CMSS1-208ENST00000496116 RPS26P62854 115 aaKnown RBP10.52□□□□□ -0.73
CMSS1-208ENST00000496116 MLF2Q15773 248 aaPredicted RBP10.52□□□□□ -0.73
CMSS1-208ENST00000496116 TBCEQ15813 527 aaPredicted RBP10.52□□□□□ -0.73
CMSS1-208ENST00000496116 ITPRIPL2Q3MIP1 535 aa10.52□□□□□ -0.73
CMSS1-208ENST00000496116 ANKDD1AQ495B1 522 aa10.52□□□□□ -0.73
CMSS1-208ENST00000496116 FAM109BQ6ICB4 259 aaPredicted RBP10.52□□□□□ -0.73
CMSS1-208ENST00000496116 ZBTB46Q86UZ6 589 aa10.52□□□□□ -0.73
CMSS1-208ENST00000496116 SLC44A2Q8IWA5 706 aaPredicted RBP10.52□□□□□ -0.73
CMSS1-208ENST00000496116 TBC1D19Q8N5T2 526 aa10.52□□□□□ -0.73
CMSS1-208ENST00000496116 SLC15A4Q8N697 577 aa10.52□□□□□ -0.73
CMSS1-208ENST00000496116 OR2L8Q8NGY9 312 aa10.52□□□□□ -0.73
CMSS1-208ENST00000496116 PSMA8Q8TAA3 256 aa10.52□□□□□ -0.73
CMSS1-208ENST00000496116 PPP1R14BQ96C90 147 aa10.52□□□□□ -0.73
CMSS1-208ENST00000496116 PLA2G2FQ9BZM2 168 aa10.52□□□□□ -0.73
CMSS1-208ENST00000496116 IGFLR1Q9H665 355 aa10.52□□□□□ -0.73
CMSS1-208ENST00000496116 HMG20AQ9NP66 347 aa10.52□□□□□ -0.73
CMSS1-208ENST00000496116 MRPS30Q9NP92 439 aaKnown RBP10.52□□□□□ -0.73
CMSS1-208ENST00000496116 SIRT3Q9NTG7 399 aaPredicted RBP10.52□□□□□ -0.73
CMSS1-208ENST00000496116 TBCCD1Q9NVR7 557 aa10.52□□□□□ -0.73
CMSS1-208ENST00000496116 TAS2R7Q9NYW3 318 aa10.52□□□□□ -0.73
CMSS1-208ENST00000496116 EHD3Q9NZN3 535 aa10.52□□□□□ -0.73
CMSS1-208ENST00000496116 C5AR2Q9P296 337 aa10.52□□□□□ -0.73
CMSS1-208ENST00000496116 KCND3Q9UK17 655 aa10.52□□□□□ -0.73
CMSS1-208ENST00000496116 TMCC3Q9ULS5 477 aa10.52□□□□□ -0.73
CMSS1-208ENST00000496116 ZFR2Q9UPR6 939 aaKnown RBP10.52□□□□□ -0.73
CMSS1-208ENST00000496116 KCNK6Q9Y257 313 aa10.52□□□□□ -0.73
CMSS1-208ENST00000496116 MYO10Q9HD67 2058 aa10.51□□□□□ -0.73
CMSS1-208ENST00000496116 A0A0A6YYD5 115 aa10.51□□□□□ -0.73
CMSS1-208ENST00000496116 LRIT2A6NDA9 550 aa10.51□□□□□ -0.73
CMSS1-208ENST00000496116 CLDN25C9JDP6 229 aa10.51□□□□□ -0.73
CMSS1-208ENST00000496116 CACNB4O00305 520 aaPredicted RBP10.51□□□□□ -0.73
CMSS1-208ENST00000496116 LCMT2O60294 686 aaKnown RBP10.51□□□□□ -0.73
CMSS1-208ENST00000496116 SERPINB7O75635 380 aa10.51□□□□□ -0.73
CMSS1-208ENST00000496116 MFN2O95140 757 aa10.51□□□□□ -0.73
CMSS1-208ENST00000496116 PKLRP30613 574 aa10.51□□□□□ -0.73
CMSS1-208ENST00000496116 GDI1P31150 447 aa10.51□□□□□ -0.73
CMSS1-208ENST00000496116 GPC1P35052 558 aa10.51□□□□□ -0.73
CMSS1-208ENST00000496116 CTSKP43235 329 aa10.51□□□□□ -0.73
CMSS1-208ENST00000496116 TP53BP2Q13625 1128 aa10.51□□□□□ -0.73
CMSS1-208ENST00000496116 FGL2Q14314 439 aa10.51□□□□□ -0.73
CMSS1-208ENST00000496116 ZNF846Q147U1 533 aa10.51□□□□□ -0.73
CMSS1-208ENST00000496116 NR1D2Q14995 579 aa10.51□□□□□ -0.73
CMSS1-208ENST00000496116 ADPRMQ3LIE5 342 aa10.51□□□□□ -0.73
CMSS1-208ENST00000496116 RPS26P11Q5JNZ5 115 aaPredicted RBP10.51□□□□□ -0.73
CMSS1-208ENST00000496116 Q6ZNX1 250 aa10.51□□□□□ -0.73
CMSS1-208ENST00000496116 DNAJC22Q8N4W6 341 aa10.51□□□□□ -0.73
CMSS1-208ENST00000496116 AQP11Q8NBQ7 271 aa10.51□□□□□ -0.73
CMSS1-208ENST00000496116 OR2A1Q8NGT9 310 aa10.51□□□□□ -0.73
CMSS1-208ENST00000496116 S100ZQ8WXG8 99 aa10.51□□□□□ -0.73
CMSS1-208ENST00000496116 GTPBP3Q969Y2 492 aaKnown RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms