RNA–Protein interactions for RNA: ENST00000495039.1

VPS50-219, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 1,115 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-219ENST00000495039 UBE2TQ9NPD8 197 aaPredicted RBP2.78□□□□□ -1.96
VPS50-219ENST00000495039 IL1RAPQ9NPH3 570 aa2.78□□□□□ -1.96
VPS50-219ENST00000495039 PILRAQ9UKJ1 303 aa2.78□□□□□ -1.96
VPS50-219ENST00000495039 ETV7Q9Y603 341 aa2.78□□□□□ -1.96
VPS50-219ENST00000495039 A0A087X0K7 114 aa2.77□□□□□ -1.97
VPS50-219ENST00000495039 PDHXO00330 501 aa2.77□□□□□ -1.97
VPS50-219ENST00000495039 P2RX6O15547 441 aa2.77□□□□□ -1.97
VPS50-219ENST00000495039 FGF19O95750 216 aa2.77□□□□□ -1.97
VPS50-219ENST00000495039 ANGPTL1O95841 491 aa2.77□□□□□ -1.97
VPS50-219ENST00000495039 GSTA2P09210 222 aa2.77□□□□□ -1.97
VPS50-219ENST00000495039 PCP11498 1178 aaKnown RBP2.77□□□□□ -1.97
VPS50-219ENST00000495039 CPA3P15088 417 aa2.77□□□□□ -1.97
VPS50-219ENST00000495039 SELEP16581 610 aa2.77□□□□□ -1.97
VPS50-219ENST00000495039 ACKR3P25106 362 aa2.77□□□□□ -1.97
VPS50-219ENST00000495039 FCGR2BP31994 310 aaPredicted RBP2.77□□□□□ -1.97
VPS50-219ENST00000495039 FCGR2CP31995 323 aa2.77□□□□□ -1.97
VPS50-219ENST00000495039 SERPINB6P35237 376 aa2.77□□□□□ -1.97
VPS50-219ENST00000495039 ABCE1P61221 599 aaKnown RBP2.77□□□□□ -1.97
VPS50-219ENST00000495039 KRT83P78385 493 aa2.77□□□□□ -1.97
VPS50-219ENST00000495039 GPR50Q13585 617 aa2.77□□□□□ -1.97
VPS50-219ENST00000495039 RCN2Q14257 317 aa2.77□□□□□ -1.97
VPS50-219ENST00000495039 FUT11Q495W5 492 aa2.77□□□□□ -1.97
VPS50-219ENST00000495039 RFTN2Q52LD8 501 aaPredicted RBP2.77□□□□□ -1.97
VPS50-219ENST00000495039 GLRA4Q5JXX5 417 aa2.77□□□□□ -1.97
VPS50-219ENST00000495039 LYPLAL1Q5VWZ2 237 aa2.77□□□□□ -1.97
VPS50-219ENST00000495039 NLRP14Q86W24 1093 aa2.77□□□□□ -1.97
VPS50-219ENST00000495039 IQCA1Q86XH1 822 aa2.77□□□□□ -1.97
VPS50-219ENST00000495039 RNF130Q86XS8 419 aa2.77□□□□□ -1.97
VPS50-219ENST00000495039 THEM5Q8N1Q8 247 aa2.77□□□□□ -1.97
VPS50-219ENST00000495039 ULK4Q96C45 1275 aa2.77□□□□□ -1.97
VPS50-219ENST00000495039 ALKBH3Q96Q83 286 aaPredicted RBP2.77□□□□□ -1.97
VPS50-219ENST00000495039 PANX3Q96QZ0 392 aa2.77□□□□□ -1.97
VPS50-219ENST00000495039 FUT8Q9BYC5 575 aa2.77□□□□□ -1.97
VPS50-219ENST00000495039 LRRC2Q9BYS8 371 aa2.77□□□□□ -1.97
VPS50-219ENST00000495039 JPT2Q9H910 190 aa2.77□□□□□ -1.97
VPS50-219ENST00000495039 ZNF319Q9P2F9 582 aa2.77□□□□□ -1.97
VPS50-219ENST00000495039 NOL7Q9UMY1 257 aaKnown RBP2.77□□□□□ -1.97
VPS50-219ENST00000495039 A8MU76 341 aa2.76□□□□□ -1.97
VPS50-219ENST00000495039 ARHGEF33A8MVX0 844 aa2.76□□□□□ -1.97
VPS50-219ENST00000495039 H0YIG0 161 aa2.76□□□□□ -1.97
VPS50-219ENST00000495039 OGTO15294 1046 aa2.76□□□□□ -1.97
VPS50-219ENST00000495039 SYT7O43581 403 aa2.76□□□□□ -1.97
VPS50-219ENST00000495039 THY1P04216 161 aa2.76□□□□□ -1.97
VPS50-219ENST00000495039 LYNP07948 512 aa2.76□□□□□ -1.97
VPS50-219ENST00000495039 CD1DP15813 335 aa2.76□□□□□ -1.97
VPS50-219ENST00000495039 GJB2P29033 226 aa2.76□□□□□ -1.97
VPS50-219ENST00000495039 CTNNB1P35222 781 aa2.76□□□□□ -1.97
VPS50-219ENST00000495039 RIDAP52758 137 aaKnown RBP2.76□□□□□ -1.97
VPS50-219ENST00000495039 CRYBA2P53672 197 aa2.76□□□□□ -1.97
VPS50-219ENST00000495039 NDUFV3P56181 108 aaKnown RBP2.76□□□□□ -1.97
VPS50-219ENST00000495039 BACE1P56817 501 aa2.76□□□□□ -1.97
VPS50-219ENST00000495039 SRPXP78539 464 aa2.76□□□□□ -1.97
VPS50-219ENST00000495039 RBBP4Q09028 425 aa2.76□□□□□ -1.97
VPS50-219ENST00000495039 RPS6KA1Q15418 735 aa2.76□□□□□ -1.97
VPS50-219ENST00000495039 KNOP1Q1ED39 458 aaKnown RBP2.76□□□□□ -1.97
VPS50-219ENST00000495039 SMU1Q2TAY7 513 aa2.76□□□□□ -1.97
VPS50-219ENST00000495039 IYDQ6PHW0 289 aa2.76□□□□□ -1.97
VPS50-219ENST00000495039 KCTD9Q7L273 389 aa2.76□□□□□ -1.97
VPS50-219ENST00000495039 CCDC91Q7Z6B0 441 aa2.76□□□□□ -1.97
VPS50-219ENST00000495039 ASPGQ86U10 573 aa2.76□□□□□ -1.97
VPS50-219ENST00000495039 CATSPER3Q86XQ3 398 aa2.76□□□□□ -1.97
VPS50-219ENST00000495039 TBC1D10CQ8IV04 446 aa2.76□□□□□ -1.97
VPS50-219ENST00000495039 RTL3Q8N8U3 475 aaKnown RBP2.76□□□□□ -1.97
VPS50-219ENST00000495039 C8orf46Q8TAG6 207 aa2.76□□□□□ -1.97
VPS50-219ENST00000495039 MRAPQ8TCY5 172 aa2.76□□□□□ -1.97
VPS50-219ENST00000495039 GPR148Q8TDV2 347 aa2.76□□□□□ -1.97
VPS50-219ENST00000495039 GANCQ8TET4 914 aa2.76□□□□□ -1.97
VPS50-219ENST00000495039 GGHQ92820 318 aa2.76□□□□□ -1.97
VPS50-219ENST00000495039 PINK1Q9BXM7 581 aa2.76□□□□□ -1.97
VPS50-219ENST00000495039 STRADBQ9C0K7 418 aa2.76□□□□□ -1.97
VPS50-219ENST00000495039 NAPBQ9H115 298 aa2.76□□□□□ -1.97
VPS50-219ENST00000495039 C2orf40Q9H1Z8 148 aa2.76□□□□□ -1.97
VPS50-219ENST00000495039 ZNF665Q9H7R5 613 aa2.76□□□□□ -1.97
VPS50-219ENST00000495039 WDR41Q9HAD4 459 aa2.76□□□□□ -1.97
VPS50-219ENST00000495039 RNPEPL1Q9HAU8 725 aa2.76□□□□□ -1.97
VPS50-219ENST00000495039 PLEKHA3Q9HB20 300 aa2.76□□□□□ -1.97
VPS50-219ENST00000495039 S100A14Q9HCY8 104 aa2.76□□□□□ -1.97
VPS50-219ENST00000495039 IL1RAPL2Q9NP60 686 aa2.76□□□□□ -1.97
VPS50-219ENST00000495039 MIS18AQ9NYP9 233 aa2.76□□□□□ -1.97
VPS50-219ENST00000495039 SPG21Q9NZD8 308 aa2.76□□□□□ -1.97
VPS50-219ENST00000495039 CNIH4Q9P003 139 aa2.76□□□□□ -1.97
VPS50-219ENST00000495039 ABCD2Q9UBJ2 740 aa2.76□□□□□ -1.97
VPS50-219ENST00000495039 SH3GLB1Q9Y371 365 aa2.76□□□□□ -1.97
VPS50-219ENST00000495039 AUP1Q9Y679 476 aa2.76□□□□□ -1.97
VPS50-219ENST00000495039 FAM205AQ6ZU69 1335 aa2.75□□□□□ -1.97
VPS50-219ENST00000495039 MUC19Q7Z5P9 8384 aa2.75□□□□□ -1.97
VPS50-219ENST00000495039 GTPBP10A4D1E9 387 aaKnown RBP2.75□□□□□ -1.97
VPS50-219ENST00000495039 LRRD1A4D1F6 860 aa2.75□□□□□ -1.97
VPS50-219ENST00000495039 ANHXE9PGG2 379 aa2.75□□□□□ -1.97
VPS50-219ENST00000495039 CCSO14618 274 aa2.75□□□□□ -1.97
VPS50-219ENST00000495039 CDX4O14627 284 aaPredicted RBP2.75□□□□□ -1.97
VPS50-219ENST00000495039 ZNF749O43361 778 aa2.75□□□□□ -1.97
VPS50-219ENST00000495039 B4GAT1O43505 415 aa2.75□□□□□ -1.97
VPS50-219ENST00000495039 GAS8O95995 478 aa2.75□□□□□ -1.97
VPS50-219ENST00000495039 CALCAP01258 141 aa2.75□□□□□ -1.97
VPS50-219ENST00000495039 UROSP10746 265 aa2.75□□□□□ -1.97
VPS50-219ENST00000495039 ODC1P11926 461 aa2.75□□□□□ -1.97
VPS50-219ENST00000495039 VCLP18206 1134 aa2.75□□□□□ -1.97
VPS50-219ENST00000495039 ECSCRQ19T08 205 aa2.75□□□□□ -1.97
VPS50-219ENST00000495039 SNRNP48Q6IEG0 339 aaKnown RBP2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms