RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 SGO1Q5FBB7 561 aa16.47■□□□□ 0.23
HDAC4-211ENST00000494800 ZNF678Q5SXM1 525 aa16.47■□□□□ 0.23
HDAC4-211ENST00000494800 FAM98AQ8NCA5 519 aaKnown RBP16.47■□□□□ 0.23
HDAC4-211ENST00000494800 APCDD1LQ8NCL9 501 aa16.47■□□□□ 0.23
HDAC4-211ENST00000494800 DNAJB8Q8NHS0 232 aa16.47■□□□□ 0.23
HDAC4-211ENST00000494800 PRR7Q8TB68 274 aa16.47■□□□□ 0.23
HDAC4-211ENST00000494800 TRPC4APQ8TEL6 797 aa16.47■□□□□ 0.23
HDAC4-211ENST00000494800 MZB1Q8WU39 189 aa16.47■□□□□ 0.23
HDAC4-211ENST00000494800 SELENOMQ8WWX9 145 aa16.47■□□□□ 0.23
HDAC4-211ENST00000494800 NCLNQ969V3 563 aa16.47■□□□□ 0.23
HDAC4-211ENST00000494800 RBM18Q96H35 190 aaKnown RBP16.47■□□□□ 0.23
HDAC4-211ENST00000494800 DGAT2Q96PD7 388 aa16.47■□□□□ 0.23
HDAC4-211ENST00000494800 ANKRD10Q9NXR5 420 aa16.47■□□□□ 0.23
HDAC4-211ENST00000494800 LRFN1Q9P244 771 aa16.47■□□□□ 0.23
HDAC4-211ENST00000494800 COPS7AQ9UBW8 275 aa16.47■□□□□ 0.23
HDAC4-211ENST00000494800 C17orf105B2RV13 164 aa16.46■□□□□ 0.23
HDAC4-211ENST00000494800 TGFBR3LH3BV60 316 aa16.46■□□□□ 0.23
HDAC4-211ENST00000494800 DLX3O60479 287 aa16.46■□□□□ 0.23
HDAC4-211ENST00000494800 ZFAND5O76080 213 aa16.46■□□□□ 0.23
HDAC4-211ENST00000494800 KRT6AP02538 564 aa16.46■□□□□ 0.23
HDAC4-211ENST00000494800 KRT6BP04259 564 aa16.46■□□□□ 0.23
HDAC4-211ENST00000494800 MYL2P10916 166 aa16.46■□□□□ 0.23
HDAC4-211ENST00000494800 TPP2P29144 1249 aaPredicted RBP16.46■□□□□ 0.23
HDAC4-211ENST00000494800 BSGP35613 385 aa16.46■□□□□ 0.23
HDAC4-211ENST00000494800 HSD17B3P37058 310 aa16.46■□□□□ 0.23
HDAC4-211ENST00000494800 KRT6CP48668 564 aa16.46■□□□□ 0.23
HDAC4-211ENST00000494800 PRKAA2P54646 552 aa16.46■□□□□ 0.23
HDAC4-211ENST00000494800 MLF1P58340 268 aa16.46■□□□□ 0.23
HDAC4-211ENST00000494800 NAA20P61599 178 aa16.46■□□□□ 0.23
HDAC4-211ENST00000494800 PLIN5Q00G26 463 aa16.46■□□□□ 0.23
HDAC4-211ENST00000494800 EIF2S3LQ2VIR3 472 aaKnown RBP16.46■□□□□ 0.23
HDAC4-211ENST00000494800 CCDC153Q494R4 210 aa16.46■□□□□ 0.23
HDAC4-211ENST00000494800 RPS27LQ71UM5 84 aaKnown RBP16.46■□□□□ 0.23
HDAC4-211ENST00000494800 TMEM125Q96AQ2 219 aa16.46■□□□□ 0.23
HDAC4-211ENST00000494800 NPAS2Q99743 824 aa16.46■□□□□ 0.23
HDAC4-211ENST00000494800 PELOQ9BRX2 385 aaKnown RBP16.46■□□□□ 0.23
HDAC4-211ENST00000494800 BRF2Q9HAW0 419 aa16.46■□□□□ 0.23
HDAC4-211ENST00000494800 ADAM29Q9UKF5 820 aa16.46■□□□□ 0.23
HDAC4-211ENST00000494800 GRID1Q9ULK0 1009 aa16.46■□□□□ 0.23
HDAC4-211ENST00000494800 ATG4BQ9Y4P1 393 aa16.46■□□□□ 0.23
HDAC4-211ENST00000494800 CLDN16Q9Y5I7 305 aa16.46■□□□□ 0.23
HDAC4-211ENST00000494800 A0A0A6YYD5 115 aa16.45■□□□□ 0.22
HDAC4-211ENST00000494800 A0A1W2PPM1 405 aa16.45■□□□□ 0.22
HDAC4-211ENST00000494800 COPEO14579 308 aa16.45■□□□□ 0.22
HDAC4-211ENST00000494800 PROM1O43490 865 aa16.45■□□□□ 0.22
HDAC4-211ENST00000494800 GUCY1B2O75343 617 aa16.45■□□□□ 0.22
HDAC4-211ENST00000494800 ETHE1O95571 254 aa16.45■□□□□ 0.22
HDAC4-211ENST00000494800 NR2F6P10588 404 aa16.45■□□□□ 0.22
HDAC4-211ENST00000494800 TSPAN8P19075 237 aa16.45■□□□□ 0.22
HDAC4-211ENST00000494800 VSNL1P62760 191 aa16.45■□□□□ 0.22
HDAC4-211ENST00000494800 IFFO1Q0D2I5 559 aa16.45■□□□□ 0.22
HDAC4-211ENST00000494800 LCP2Q13094 533 aa16.45■□□□□ 0.22
HDAC4-211ENST00000494800 SPINK14Q6IE38 97 aa16.45■□□□□ 0.22
HDAC4-211ENST00000494800 LETMD1Q6P1Q0 360 aa16.45■□□□□ 0.22
HDAC4-211ENST00000494800 EMBQ6PCB8 327 aa16.45■□□□□ 0.22
HDAC4-211ENST00000494800 HSDL2Q6YN16 418 aa16.45■□□□□ 0.22
HDAC4-211ENST00000494800 GPRIN3Q6ZVF9 776 aa16.45■□□□□ 0.22
HDAC4-211ENST00000494800 ARMC10Q8N2F6 343 aa16.45■□□□□ 0.22
HDAC4-211ENST00000494800 TMEM156Q8N614 296 aa16.45■□□□□ 0.22
HDAC4-211ENST00000494800 CCDC63Q8NA47 563 aa16.45■□□□□ 0.22
HDAC4-211ENST00000494800 MDS2Q8NDY4 140 aa16.45■□□□□ 0.22
HDAC4-211ENST00000494800 EPS8L3Q8TE67 593 aaKnown RBP16.45■□□□□ 0.22
HDAC4-211ENST00000494800 L3HYPDHQ96EM0 354 aa16.45■□□□□ 0.22
HDAC4-211ENST00000494800 ART5Q96L15 291 aa16.45■□□□□ 0.22
HDAC4-211ENST00000494800 SIGLEC12Q96PQ1 595 aa16.45■□□□□ 0.22
HDAC4-211ENST00000494800 TMEM237Q96Q45 408 aa16.45■□□□□ 0.22
HDAC4-211ENST00000494800 ZNF382Q96SR6 550 aa16.45■□□□□ 0.22
HDAC4-211ENST00000494800 OR8D2Q9GZM6 311 aa16.45■□□□□ 0.22
HDAC4-211ENST00000494800 IQCGQ9H095 443 aaKnown RBP16.45■□□□□ 0.22
HDAC4-211ENST00000494800 SLC12A4Q9UP95 1085 aa16.45■□□□□ 0.22
HDAC4-211ENST00000494800 CPAMD8Q8IZJ3 1885 aa16.44■□□□□ 0.22
HDAC4-211ENST00000494800 CLEC18AA5D8T8 446 aa16.44■□□□□ 0.22
HDAC4-211ENST00000494800 FGF17O60258 216 aa16.44■□□□□ 0.22
HDAC4-211ENST00000494800 MAN1A2O60476 641 aa16.44■□□□□ 0.22
HDAC4-211ENST00000494800 EEDO75530 441 aaKnown RBP16.44■□□□□ 0.22
HDAC4-211ENST00000494800 OR4F21O95013 312 aa16.44■□□□□ 0.22
HDAC4-211ENST00000494800 HSD3B1P14060 373 aa16.44■□□□□ 0.22
HDAC4-211ENST00000494800 HSD3B2P26439 372 aa16.44■□□□□ 0.22
HDAC4-211ENST00000494800 HMOX2P30519 316 aa16.44■□□□□ 0.22
HDAC4-211ENST00000494800 TRHRP34981 398 aaPredicted RBP16.44■□□□□ 0.22
HDAC4-211ENST00000494800 STT3AP46977 705 aa16.44■□□□□ 0.22
HDAC4-211ENST00000494800 HLCSP50747 726 aa16.44■□□□□ 0.22
HDAC4-211ENST00000494800 PKNOX1P55347 436 aa16.44■□□□□ 0.22
HDAC4-211ENST00000494800 HNRNPH2P55795 449 aaKnown RBP16.44■□□□□ 0.22
HDAC4-211ENST00000494800 ID2Q02363 134 aa16.44■□□□□ 0.22
HDAC4-211ENST00000494800 FOLH1Q04609 750 aa16.44■□□□□ 0.22
HDAC4-211ENST00000494800 UNC50Q53HI1 259 aa16.44■□□□□ 0.22
HDAC4-211ENST00000494800 CCNYL2Q5T2Q4 361 aa16.44■□□□□ 0.22
HDAC4-211ENST00000494800 C18orf63Q68DL7 685 aa16.44■□□□□ 0.22
HDAC4-211ENST00000494800 MRM1Q6IN84 353 aaKnown RBP16.44■□□□□ 0.22
HDAC4-211ENST00000494800 CLEC18BQ6UXF7 455 aa16.44■□□□□ 0.22
HDAC4-211ENST00000494800 RIBC1Q8N443 379 aaPredicted RBP16.44■□□□□ 0.22
HDAC4-211ENST00000494800 CDYL2Q8N8U2 506 aa16.44■□□□□ 0.22
HDAC4-211ENST00000494800 CLEC18CQ8NCF0 446 aa16.44■□□□□ 0.22
HDAC4-211ENST00000494800 OR5L2Q8NGL0 311 aa16.44■□□□□ 0.22
HDAC4-211ENST00000494800 RDH11Q8TC12 318 aa16.44■□□□□ 0.22
HDAC4-211ENST00000494800 METTL6Q8TCB7 284 aa16.44■□□□□ 0.22
HDAC4-211ENST00000494800 THAP3Q8WTV1 239 aaPredicted RBP16.44■□□□□ 0.22
HDAC4-211ENST00000494800 PTPMT1Q8WUK0 201 aaPredicted RBP16.44■□□□□ 0.22
HDAC4-211ENST00000494800 NR4A3Q92570 626 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms