RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 KRT12Q99456 494 aa21.53■■□□□ 1.04
COL27A1-208ENST00000494780 MAPKAP1Q9BPZ7 522 aa21.53■■□□□ 1.04
COL27A1-208ENST00000494780 SAYSD1Q9NPB0 183 aa21.53■■□□□ 1.04
COL27A1-208ENST00000494780 KCNJ16Q9NPI9 418 aa21.53■■□□□ 1.04
COL27A1-208ENST00000494780 RNF112Q9ULX5 631 aa21.53■■□□□ 1.04
COL27A1-208ENST00000494780 OR14I1A6ND48 311 aa21.52■■□□□ 1.04
COL27A1-208ENST00000494780 FAM90A27PA6NNH2 459 aa21.52■■□□□ 1.04
COL27A1-208ENST00000494780 NPIPA2E9PIF3 369 aa21.52■■□□□ 1.04
COL27A1-208ENST00000494780 NPIPA3F8WFD2 350 aa21.52■■□□□ 1.04
COL27A1-208ENST00000494780 LDB3O75112 727 aa21.52■■□□□ 1.04
COL27A1-208ENST00000494780 TOXO94900 526 aa21.52■■□□□ 1.04
COL27A1-208ENST00000494780 SCELO95171 688 aa21.52■■□□□ 1.04
COL27A1-208ENST00000494780 IGHG3P01860 377 aa21.52■■□□□ 1.04
COL27A1-208ENST00000494780 GP5P40197 560 aa21.52■■□□□ 1.04
COL27A1-208ENST00000494780 NUP107P57740 925 aa21.52■■□□□ 1.04
COL27A1-208ENST00000494780 RAB10P61026 200 aa21.52■■□□□ 1.04
COL27A1-208ENST00000494780 TFF3Q07654 80 aa21.52■■□□□ 1.04
COL27A1-208ENST00000494780 PMPCAQ10713 525 aa21.52■■□□□ 1.04
COL27A1-208ENST00000494780 TESK1Q15569 626 aa21.52■■□□□ 1.04
COL27A1-208ENST00000494780 IL1RL2Q9HB29 575 aa21.52■■□□□ 1.04
COL27A1-208ENST00000494780 NPDC1Q9NQX5 325 aaPredicted RBP21.52■■□□□ 1.04
COL27A1-208ENST00000494780 SACM1LQ9NTJ5 587 aa21.52■■□□□ 1.04
COL27A1-208ENST00000494780 COPS7AQ9UBW8 275 aa21.52■■□□□ 1.04
COL27A1-208ENST00000494780 ZNF407Q9C0G0 2248 aa21.52■■□□□ 1.04
COL27A1-208ENST00000494780 TCRBV9S1A1TA0A576 114 aa21.51■■□□□ 1.03
COL27A1-208ENST00000494780 NKX2-6A6NCS4 301 aa21.51■■□□□ 1.03
COL27A1-208ENST00000494780 FAM159BA6NKW6 160 aa21.51■■□□□ 1.03
COL27A1-208ENST00000494780 BCKDKO14874 412 aa21.51■■□□□ 1.03
COL27A1-208ENST00000494780 HIST1H1TP22492 207 aaPredicted RBP21.51■■□□□ 1.03
COL27A1-208ENST00000494780 MSX1P28360 303 aa21.51■■□□□ 1.03
COL27A1-208ENST00000494780 SERPINB1P30740 379 aa21.51■■□□□ 1.03
COL27A1-208ENST00000494780 CALCOCO2Q13137 446 aa21.51■■□□□ 1.03
COL27A1-208ENST00000494780 AP5B1Q2VPB7 878 aa21.51■■□□□ 1.03
COL27A1-208ENST00000494780 CHSY3Q70JA7 882 aa21.51■■□□□ 1.03
COL27A1-208ENST00000494780 CCDC71Q8IV32 467 aaPredicted RBP21.51■■□□□ 1.03
COL27A1-208ENST00000494780 LAS2Q8IYD9 372 aa21.51■■□□□ 1.03
COL27A1-208ENST00000494780 FAM109AQ8N4B1 249 aa21.51■■□□□ 1.03
COL27A1-208ENST00000494780 TMEM251Q8N6I4 163 aa21.51■■□□□ 1.03
COL27A1-208ENST00000494780 OR5M3Q8NGP4 307 aa21.51■■□□□ 1.03
COL27A1-208ENST00000494780 STAG3L4Q8TBR4 150 aa21.51■■□□□ 1.03
COL27A1-208ENST00000494780 SREK1Q8WXA9 508 aaKnown RBP21.51■■□□□ 1.03
COL27A1-208ENST00000494780 ANKRD9Q96BM1 317 aaPredicted RBP21.51■■□□□ 1.03
COL27A1-208ENST00000494780 SMC6Q96SB8 1091 aa21.51■■□□□ 1.03
COL27A1-208ENST00000494780 UCK2Q9BZX2 261 aa21.51■■□□□ 1.03
COL27A1-208ENST00000494780 PHACTR1Q9C0D0 580 aa21.51■■□□□ 1.03
COL27A1-208ENST00000494780 PNPLA3Q9NST1 481 aa21.51■■□□□ 1.03
COL27A1-208ENST00000494780 WHRNQ9P202 907 aa21.51■■□□□ 1.03
COL27A1-208ENST00000494780 ADGRG4Q8IZF6 3080 aa21.51■■□□□ 1.03
COL27A1-208ENST00000494780 A0A1B0GVC2 190 aa21.5■■□□□ 1.03
COL27A1-208ENST00000494780 G3V3Y1 287 aa21.5■■□□□ 1.03
COL27A1-208ENST00000494780 RTCAO00442 366 aaKnown RBP21.5■■□□□ 1.03
COL27A1-208ENST00000494780 GSTA2P09210 222 aa21.5■■□□□ 1.03
COL27A1-208ENST00000494780 COX7A2P14406 83 aa21.5■■□□□ 1.03
COL27A1-208ENST00000494780 CPN2P22792 545 aa21.5■■□□□ 1.03
COL27A1-208ENST00000494780 PCDH1Q08174 1060 aa21.5■■□□□ 1.03
COL27A1-208ENST00000494780 MPEG1Q2M385 716 aa21.5■■□□□ 1.03
COL27A1-208ENST00000494780 HYAL4Q2M3T9 481 aa21.5■■□□□ 1.03
COL27A1-208ENST00000494780 MED27Q6P2C8 311 aa21.5■■□□□ 1.03
COL27A1-208ENST00000494780 SPNS3Q6ZMD2 512 aa21.5■■□□□ 1.03
COL27A1-208ENST00000494780 FAM47EQ6ZV65 393 aa21.5■■□□□ 1.03
COL27A1-208ENST00000494780 ZNF721Q8TF20 911 aa21.5■■□□□ 1.03
COL27A1-208ENST00000494780 EXT2Q93063 718 aa21.5■■□□□ 1.03
COL27A1-208ENST00000494780 ERP44Q9BS26 406 aa21.5■■□□□ 1.03
COL27A1-208ENST00000494780 PRM3Q9NNZ6 103 aa21.5■■□□□ 1.03
COL27A1-208ENST00000494780 NUDT4Q9NZJ9 180 aa21.5■■□□□ 1.03
COL27A1-208ENST00000494780 HIVEP1P15822 2718 aa21.5■■□□□ 1.03
COL27A1-208ENST00000494780 HCFC1P51610 2035 aa21.5■■□□□ 1.03
COL27A1-208ENST00000494780 FAM187AA6NFU0 413 aa21.49■■□□□ 1.03
COL27A1-208ENST00000494780 FIGNL2A6NMB9 653 aa21.49■■□□□ 1.03
COL27A1-208ENST00000494780 ZNF354AO60765 605 aaPredicted RBP21.49■■□□□ 1.03
COL27A1-208ENST00000494780 ETHE1O95571 254 aa21.49■■□□□ 1.03
COL27A1-208ENST00000494780 P04436 131 aa21.49■■□□□ 1.03
COL27A1-208ENST00000494780 PCNAP12004 261 aa21.49■■□□□ 1.03
COL27A1-208ENST00000494780 ACVR2AP27037 513 aa21.49■■□□□ 1.03
COL27A1-208ENST00000494780 SPRP35270 261 aaPredicted RBP21.49■■□□□ 1.03
COL27A1-208ENST00000494780 SSR2P43308 183 aa21.49■■□□□ 1.03
COL27A1-208ENST00000494780 IGLV3-21P80748 117 aaPredicted RBP21.49■■□□□ 1.03
COL27A1-208ENST00000494780 ID2Q02363 134 aa21.49■■□□□ 1.03
COL27A1-208ENST00000494780 FOXO1Q12778 655 aa21.49■■□□□ 1.03
COL27A1-208ENST00000494780 BIKQ13323 160 aa21.49■■□□□ 1.03
COL27A1-208ENST00000494780 PIGGQ5H8A4 983 aa21.49■■□□□ 1.03
COL27A1-208ENST00000494780 GRTP1Q5TC63 336 aa21.49■■□□□ 1.03
COL27A1-208ENST00000494780 C3orf62Q6ZUJ4 267 aa21.49■■□□□ 1.03
COL27A1-208ENST00000494780 TRILQ7L0X0 811 aa21.49■■□□□ 1.03
COL27A1-208ENST00000494780 DMRTC2Q8IXT2 367 aaPredicted RBP21.49■■□□□ 1.03
COL27A1-208ENST00000494780 OR5M9Q8NGP3 310 aa21.49■■□□□ 1.03
COL27A1-208ENST00000494780 NUBPLQ8TB37 319 aa21.49■■□□□ 1.03
COL27A1-208ENST00000494780 CMTM7Q96FZ5 175 aa21.49■■□□□ 1.03
COL27A1-208ENST00000494780 DPH5Q9H2P9 285 aa21.49■■□□□ 1.03
COL27A1-208ENST00000494780 ALG9Q9H6U8 611 aa21.49■■□□□ 1.03
COL27A1-208ENST00000494780 LIPGQ9Y5X9 500 aa21.49■■□□□ 1.03
COL27A1-208ENST00000494780 PHF3Q92576 2039 aaKnown RBP21.49■■□□□ 1.03
COL27A1-208ENST00000494780 DNAJC13O75165 2243 aa21.48■■□□□ 1.03
COL27A1-208ENST00000494780 AQP7O14520 342 aa21.48■■□□□ 1.03
COL27A1-208ENST00000494780 FGF17O60258 216 aa21.48■■□□□ 1.03
COL27A1-208ENST00000494780 TGFB1P01137 390 aa21.48■■□□□ 1.03
COL27A1-208ENST00000494780 C1QAP02745 245 aa21.48■■□□□ 1.03
COL27A1-208ENST00000494780 MAGEA5P43359 124 aa21.48■■□□□ 1.03
COL27A1-208ENST00000494780 STT3AP46977 705 aa21.48■■□□□ 1.03
COL27A1-208ENST00000494780 MRPS25P82663 173 aaKnown RBP21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms