RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 A0A0A6YYD5 115 aa14.91□□□□□ -0.02
LIME1-209ENST00000494776 H3BQF6 201 aa14.91□□□□□ -0.02
LIME1-209ENST00000494776 TGFBR3LH3BV60 316 aa14.91□□□□□ -0.02
LIME1-209ENST00000494776 PYCARD-AS1I3L0S3 204 aa14.91□□□□□ -0.02
LIME1-209ENST00000494776 TMPRSS11DO60235 418 aa14.91□□□□□ -0.02
LIME1-209ENST00000494776 TRIM13O60858 407 aa14.91□□□□□ -0.02
LIME1-209ENST00000494776 HSD3B1P14060 373 aa14.91□□□□□ -0.02
LIME1-209ENST00000494776 HSD3B2P26439 372 aa14.91□□□□□ -0.02
LIME1-209ENST00000494776 PPP2R1BP30154 601 aa14.91□□□□□ -0.02
LIME1-209ENST00000494776 SOX11P35716 441 aa14.91□□□□□ -0.02
LIME1-209ENST00000494776 HNRNPH2P55795 449 aaKnown RBP14.91□□□□□ -0.02
LIME1-209ENST00000494776 ID2Q02363 134 aa14.91□□□□□ -0.02
LIME1-209ENST00000494776 PLEKHN1Q494U1 663 aaPredicted RBP14.91□□□□□ -0.02
LIME1-209ENST00000494776 C18orf63Q68DL7 685 aa14.91□□□□□ -0.02
LIME1-209ENST00000494776 FCRLBQ6BAA4 426 aa14.91□□□□□ -0.02
LIME1-209ENST00000494776 FRMD7Q6ZUT3 714 aa14.91□□□□□ -0.02
LIME1-209ENST00000494776 CROCCP2Q86T23 111 aa14.91□□□□□ -0.02
LIME1-209ENST00000494776 TMEM132CQ8N3T6 1108 aa14.91□□□□□ -0.02
LIME1-209ENST00000494776 TCP10LQ8TDR4 215 aa14.91□□□□□ -0.02
LIME1-209ENST00000494776 AGAP11Q8TF27 550 aa14.91□□□□□ -0.02
LIME1-209ENST00000494776 SREK1Q8WXA9 508 aaKnown RBP14.91□□□□□ -0.02
LIME1-209ENST00000494776 TANKQ92844 425 aa14.91□□□□□ -0.02
LIME1-209ENST00000494776 ZBTB9Q96C00 473 aa14.91□□□□□ -0.02
LIME1-209ENST00000494776 ZNF717Q9BY31 904 aaPredicted RBP14.91□□□□□ -0.02
LIME1-209ENST00000494776 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.91□□□□□ -0.02
LIME1-209ENST00000494776 SLC17A7Q9P2U7 560 aa14.91□□□□□ -0.02
LIME1-209ENST00000494776 VPS29Q9UBQ0 182 aa14.91□□□□□ -0.02
LIME1-209ENST00000494776 ADAM29Q9UKF5 820 aa14.91□□□□□ -0.02
LIME1-209ENST00000494776 TIMM22Q9Y584 194 aa14.91□□□□□ -0.02
LIME1-209ENST00000494776 PROM1O43490 865 aa14.9□□□□□ -0.02
LIME1-209ENST00000494776 F10P00742 488 aa14.9□□□□□ -0.02
LIME1-209ENST00000494776 MYZAPP0CAP1 466 aa14.9□□□□□ -0.02
LIME1-209ENST00000494776 NR2F6P10588 404 aa14.9□□□□□ -0.02
LIME1-209ENST00000494776 MAPK12P53778 367 aa14.9□□□□□ -0.02
LIME1-209ENST00000494776 CSTF3Q12996 717 aaKnown RBP14.9□□□□□ -0.02
LIME1-209ENST00000494776 PCLAFQ15004 111 aa14.9□□□□□ -0.02
LIME1-209ENST00000494776 TLR1Q15399 786 aa14.9□□□□□ -0.02
LIME1-209ENST00000494776 TERF2Q15554 542 aa14.9□□□□□ -0.02
LIME1-209ENST00000494776 ELAVL1Q15717 326 aaKnown RBP14.9□□□□□ -0.02
LIME1-209ENST00000494776 MEP1AQ16819 746 aa14.9□□□□□ -0.02
LIME1-209ENST00000494776 ACER2Q5QJU3 275 aa14.9□□□□□ -0.02
LIME1-209ENST00000494776 FAM219BQ5XKK7 198 aa14.9□□□□□ -0.02
LIME1-209ENST00000494776 MRM1Q6IN84 353 aaKnown RBP14.9□□□□□ -0.02
LIME1-209ENST00000494776 Q6ZS92 163 aa14.9□□□□□ -0.02
LIME1-209ENST00000494776 OR4N5Q8IXE1 308 aa14.9□□□□□ -0.02
LIME1-209ENST00000494776 IQCKQ8N0W5 287 aa14.9□□□□□ -0.02
LIME1-209ENST00000494776 METTL4Q8N3J2 472 aa14.9□□□□□ -0.02
LIME1-209ENST00000494776 KIF2BQ8N4N8 673 aa14.9□□□□□ -0.02
LIME1-209ENST00000494776 GBP7Q8N8V2 638 aaPredicted RBP14.9□□□□□ -0.02
LIME1-209ENST00000494776 B3GNT7Q8NFL0 401 aa14.9□□□□□ -0.02
LIME1-209ENST00000494776 SUN3Q8TAQ9 357 aa14.9□□□□□ -0.02
LIME1-209ENST00000494776 CPT1CQ8TCG5 803 aa14.9□□□□□ -0.02
LIME1-209ENST00000494776 DAZLQ92904 295 aaKnown RBP14.9□□□□□ -0.02
LIME1-209ENST00000494776 ZIM3Q96PE6 472 aa14.9□□□□□ -0.02
LIME1-209ENST00000494776 KCNA7Q96RP8 456 aa14.9□□□□□ -0.02
LIME1-209ENST00000494776 DEFB126Q9BYW3 111 aa14.9□□□□□ -0.02
LIME1-209ENST00000494776 SHCBP1LQ9BZQ2 653 aa14.9□□□□□ -0.02
LIME1-209ENST00000494776 VTI1BQ9UEU0 232 aa14.9□□□□□ -0.02
LIME1-209ENST00000494776 ASB4Q9Y574 426 aa14.9□□□□□ -0.02
LIME1-209ENST00000494776 CSAG2Q9Y5P2 127 aa14.9□□□□□ -0.02
LIME1-209ENST00000494776 TLN1Q9Y490 2541 aaKnown RBP14.9□□□□□ -0.02
LIME1-209ENST00000494776 A0A1W2PR48 441 aa14.89□□□□□ -0.03
LIME1-209ENST00000494776 GLOD5A6NK44 160 aa14.89□□□□□ -0.03
LIME1-209ENST00000494776 UBFD1O14562 309 aaKnown RBP14.89□□□□□ -0.03
LIME1-209ENST00000494776 CTIFO43310 598 aaKnown RBP14.89□□□□□ -0.03
LIME1-209ENST00000494776 DYRK3O43781 588 aa14.89□□□□□ -0.03
LIME1-209ENST00000494776 FGF17O60258 216 aa14.89□□□□□ -0.03
LIME1-209ENST00000494776 GUCY1B2O75343 617 aa14.89□□□□□ -0.03
LIME1-209ENST00000494776 PRKRAO75569 313 aaKnown RBP14.89□□□□□ -0.03
LIME1-209ENST00000494776 SORBS2O94875 1100 aaKnown RBP14.89□□□□□ -0.03
LIME1-209ENST00000494776 WDPCPO95876 746 aa14.89□□□□□ -0.03
LIME1-209ENST00000494776 COX7A2P14406 83 aa14.89□□□□□ -0.03
LIME1-209ENST00000494776 ALDH3A1P30838 453 aa14.89□□□□□ -0.03
LIME1-209ENST00000494776 CLCN2P51788 898 aa14.89□□□□□ -0.03
LIME1-209ENST00000494776 BIKQ13323 160 aa14.89□□□□□ -0.03
LIME1-209ENST00000494776 ZNF169Q14929 603 aaPredicted RBP14.89□□□□□ -0.03
LIME1-209ENST00000494776 IMPG1Q17R60 797 aa14.89□□□□□ -0.03
LIME1-209ENST00000494776 H3F3CQ6NXT2 135 aa14.89□□□□□ -0.03
LIME1-209ENST00000494776 SCIMPQ6UWF3 145 aa14.89□□□□□ -0.03
LIME1-209ENST00000494776 COMMD6Q7Z4G1 85 aa14.89□□□□□ -0.03
LIME1-209ENST00000494776 CUZD1Q86UP6 607 aa14.89□□□□□ -0.03
LIME1-209ENST00000494776 CRLF3Q8IUI8 442 aa14.89□□□□□ -0.03
LIME1-209ENST00000494776 CATSPER1Q8NEC5 780 aa14.89□□□□□ -0.03
LIME1-209ENST00000494776 NFAM1Q8NET5 270 aaPredicted RBP14.89□□□□□ -0.03
LIME1-209ENST00000494776 OR1N1Q8NGS0 311 aa14.89□□□□□ -0.03
LIME1-209ENST00000494776 ELP5Q8TE02 316 aa14.89□□□□□ -0.03
LIME1-209ENST00000494776 HAS2Q92819 552 aa14.89□□□□□ -0.03
LIME1-209ENST00000494776 ANKRD9Q96BM1 317 aaPredicted RBP14.89□□□□□ -0.03
LIME1-209ENST00000494776 VMP1Q96GC9 406 aa14.89□□□□□ -0.03
LIME1-209ENST00000494776 RBM18Q96H35 190 aaKnown RBP14.89□□□□□ -0.03
LIME1-209ENST00000494776 DGAT2Q96PD7 388 aa14.89□□□□□ -0.03
LIME1-209ENST00000494776 CDCP1Q9H5V8 836 aa14.89□□□□□ -0.03
LIME1-209ENST00000494776 CLDN16Q9Y5I7 305 aa14.89□□□□□ -0.03
LIME1-209ENST00000494776 DOCK10Q96BY6 2186 aa14.88□□□□□ -0.03
LIME1-209ENST00000494776 TRBV11-1A0A0K0K1C0 115 aa14.88□□□□□ -0.03
LIME1-209ENST00000494776 C17orf105B2RV13 164 aa14.88□□□□□ -0.03
LIME1-209ENST00000494776 AIFM1O95831 613 aa14.88□□□□□ -0.03
LIME1-209ENST00000494776 CREB1P16220 341 aa14.88□□□□□ -0.03
LIME1-209ENST00000494776 TPP2P29144 1249 aaPredicted RBP14.88□□□□□ -0.03
LIME1-209ENST00000494776 HTR6P50406 440 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms