RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 CCNYQ8ND76 341 aa4.59□□□□□ -1.68
PRKD3-210ENST00000494667 C7orf57Q8NEG2 295 aa4.59□□□□□ -1.68
PRKD3-210ENST00000494667 OTUB1Q96FW1 271 aaPredicted RBP4.59□□□□□ -1.68
PRKD3-210ENST00000494667 TREX2Q9BQ50 279 aaPredicted RBP4.59□□□□□ -1.68
PRKD3-210ENST00000494667 MFRPQ9BY79 579 aa4.59□□□□□ -1.68
PRKD3-210ENST00000494667 SAP130Q9H0E3 1048 aa4.59□□□□□ -1.68
PRKD3-210ENST00000494667 MROH8Q9H579 483 aa4.59□□□□□ -1.68
PRKD3-210ENST00000494667 EVA1AQ9H8M9 152 aa4.59□□□□□ -1.68
PRKD3-210ENST00000494667 PLEKHA1Q9HB21 404 aa4.59□□□□□ -1.68
PRKD3-210ENST00000494667 HMX1Q9NP08 348 aaPredicted RBP4.59□□□□□ -1.68
PRKD3-210ENST00000494667 HCN3Q9P1Z3 774 aa4.59□□□□□ -1.68
PRKD3-210ENST00000494667 BTNL2Q9UIR0 455 aa4.59□□□□□ -1.68
PRKD3-210ENST00000494667 KCND3Q9UK17 655 aa4.59□□□□□ -1.68
PRKD3-210ENST00000494667 FBXW11Q9UKB1 542 aa4.59□□□□□ -1.68
PRKD3-210ENST00000494667 DMRT1Q9Y5R6 373 aa4.59□□□□□ -1.68
PRKD3-210ENST00000494667 DNMT3AQ9Y6K1 912 aaPredicted RBP4.59□□□□□ -1.68
PRKD3-210ENST00000494667 PLXNB2O15031 1838 aa4.59□□□□□ -1.68
PRKD3-210ENST00000494667 TRAV19A0A0A6YYK7 116 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 PRAMEF33A0A0G2JMD5 474 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 GTPBP1O00178 669 aaKnown RBP4.58□□□□□ -1.68
PRKD3-210ENST00000494667 FPGTO14772 594 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 PRAMEF10O60809 474 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 TMEM127O75204 238 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 ECI2O75521 394 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 GRAP2O75791 330 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 KCNK5O95279 499 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 GLP2RO95838 553 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 SOD1P00441 154 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 GABRA1P14867 456 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 PAX1P15863 534 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 PPP3CBP16298 524 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 SAT1P21673 171 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 ACSL1P33121 698 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 PCGF2P35227 344 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 ATP5C1P36542 298 aaKnown RBP4.58□□□□□ -1.68
PRKD3-210ENST00000494667 NNMTP40261 264 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 PLD1Q13393 1074 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 EIF4EBP2Q13542 120 aaPredicted RBP4.58□□□□□ -1.68
PRKD3-210ENST00000494667 TOMM20Q15388 145 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 TAF1AQ15573 450 aaPredicted RBP4.58□□□□□ -1.68
PRKD3-210ENST00000494667 SLC36A2Q495M3 483 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 MINDY4Q4G0A6 757 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 ATRAIDQ6UW56 229 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 USP53Q70EK8 1073 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 NLRC3Q7RTR2 1065 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 GLCCI1Q86VQ1 547 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 PAQR7Q86WK9 346 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 LRRC28Q86X40 367 aaPredicted RBP4.58□□□□□ -1.68
PRKD3-210ENST00000494667 STK40Q8N2I9 435 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 NKAPQ8N5F7 415 aaKnown RBP4.58□□□□□ -1.68
PRKD3-210ENST00000494667 FAM46DQ8NEK8 389 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 OR56B4Q8NH76 319 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 HSD17B8Q92506 261 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 CELF6Q96J87 481 aaKnown RBP4.58□□□□□ -1.68
PRKD3-210ENST00000494667 HSH2DQ96JZ2 352 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 CXorf58Q96LI9 332 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 CMTM3Q96MX0 182 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 SFXN2Q96NB2 322 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 NELL2Q99435 816 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 OSMRQ99650 979 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 RBCK1Q9BYM8 510 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 MS4A7Q9GZW8 240 aaPredicted RBP4.58□□□□□ -1.68
PRKD3-210ENST00000494667 CHRDQ9H2X0 955 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 AGO3Q9H9G7 860 aaKnown RBP4.58□□□□□ -1.68
PRKD3-210ENST00000494667 EXOSC3Q9NQT5 275 aaKnown RBP4.58□□□□□ -1.68
PRKD3-210ENST00000494667 ASB6Q9NWX5 421 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 PIPOXQ9P0Z9 390 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 ASH2LQ9UBL3 628 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 PLCL2Q9UPR0 1127 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 MED16Q9Y2X0 877 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 RPL36Q9Y3U8 105 aaKnown RBP4.58□□□□□ -1.68
PRKD3-210ENST00000494667 ZNF451Q9Y4E5 1061 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 CLCA3PQ9Y6N3 262 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 LOC102723532A0A0G2JNH3 316 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 A0A1B0GUH1 482 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 C5orf52A6NGY3 159 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 LRRC72A6NJI9 287 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 FAM74A7A6NL05 159 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 MCRIP1C9JLW8 97 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 TEX46H3BTG2 121 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 SYN3O14994 580 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 EIF3GO75821 320 aaKnown RBP eCLIP4.58□□□□□ -1.68
PRKD3-210ENST00000494667 GDF11O95390 407 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 FHP07954 510 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 HOXC4P09017 264 aaPredicted RBP4.58□□□□□ -1.68
PRKD3-210ENST00000494667 TPH1P17752 444 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 CXCL3P19876 107 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 PBX3P40426 434 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 SULT1E1P49888 294 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 CLCN7P51798 805 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 CRYBA2P53672 197 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 RAP2BP61225 183 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 PPIGQ13427 754 aaKnown RBP eCLIP4.58□□□□□ -1.68
PRKD3-210ENST00000494667 RNF212Q495C1 297 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 FAM74A3Q4VXF1 159 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 LBHQ53QV2 105 aaPredicted RBP4.58□□□□□ -1.68
PRKD3-210ENST00000494667 CCDC157Q569K6 752 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 TRMT11Q7Z4G4 463 aaKnown RBP4.58□□□□□ -1.68
PRKD3-210ENST00000494667 GPR142Q7Z601 462 aa4.58□□□□□ -1.68
PRKD3-210ENST00000494667 C10orf111Q8N326 155 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms