RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 GLOD5A6NK44 160 aa10.91□□□□□ -0.66
UBA3-211ENST00000493957 TMEM233B4DJY2 109 aa10.91□□□□□ -0.66
UBA3-211ENST00000493957 FGF17O60258 216 aa10.91□□□□□ -0.66
UBA3-211ENST00000493957 MAN1A2O60476 641 aa10.91□□□□□ -0.66
UBA3-211ENST00000493957 SEMA3DO95025 777 aa10.91□□□□□ -0.66
UBA3-211ENST00000493957 AIFM1O95831 613 aa10.91□□□□□ -0.66
UBA3-211ENST00000493957 SERPINA7P05543 415 aa10.91□□□□□ -0.66
UBA3-211ENST00000493957 ENO1P06733 434 aaKnown RBP10.91□□□□□ -0.66
UBA3-211ENST00000493957 BPGMP07738 259 aa10.91□□□□□ -0.66
UBA3-211ENST00000493957 FAM58BPP0C7Q3 252 aa10.91□□□□□ -0.66
UBA3-211ENST00000493957 SFTPCP11686 197 aa10.91□□□□□ -0.66
UBA3-211ENST00000493957 TNFRSF17Q02223 184 aa10.91□□□□□ -0.66
UBA3-211ENST00000493957 ACTN3Q08043 901 aaPredicted RBP10.91□□□□□ -0.66
UBA3-211ENST00000493957 BTBD16Q32M84 506 aa10.91□□□□□ -0.66
UBA3-211ENST00000493957 NADK2Q4G0N4 442 aa10.91□□□□□ -0.66
UBA3-211ENST00000493957 VWA5B1Q5TIE3 1220 aa10.91□□□□□ -0.66
UBA3-211ENST00000493957 FCRLBQ6BAA4 426 aa10.91□□□□□ -0.66
UBA3-211ENST00000493957 LINC00696Q6ZRV3 163 aa10.91□□□□□ -0.66
UBA3-211ENST00000493957 NUDT13Q86X67 352 aa10.91□□□□□ -0.66
UBA3-211ENST00000493957 KBTBD2Q8IY47 623 aa10.91□□□□□ -0.66
UBA3-211ENST00000493957 ZNF595Q8IYB9 648 aa10.91□□□□□ -0.66
UBA3-211ENST00000493957 C1orf52Q8N6N3 182 aaKnown RBP10.91□□□□□ -0.66
UBA3-211ENST00000493957 RBMXL3Q8N7X1 1067 aaKnown RBP10.91□□□□□ -0.66
UBA3-211ENST00000493957 DOK4Q8TEW6 326 aa10.91□□□□□ -0.66
UBA3-211ENST00000493957 SREK1Q8WXA9 508 aaKnown RBP10.91□□□□□ -0.66
UBA3-211ENST00000493957 APIPQ96GX9 242 aa10.91□□□□□ -0.66
UBA3-211ENST00000493957 NPAS2Q99743 824 aa10.91□□□□□ -0.66
UBA3-211ENST00000493957 CENPKQ9BS16 269 aa10.91□□□□□ -0.66
UBA3-211ENST00000493957 TUBB6Q9BUF5 446 aa10.91□□□□□ -0.66
UBA3-211ENST00000493957 LHPPQ9H008 270 aa10.91□□□□□ -0.66
UBA3-211ENST00000493957 BRF2Q9HAW0 419 aa10.91□□□□□ -0.66
UBA3-211ENST00000493957 PNO1Q9NRX1 252 aaKnown RBP10.91□□□□□ -0.66
UBA3-211ENST00000493957 TEX10Q9NXF1 929 aaPredicted RBP10.91□□□□□ -0.66
UBA3-211ENST00000493957 SENP1Q9P0U3 644 aa10.91□□□□□ -0.66
UBA3-211ENST00000493957 PTGFRNQ9P2B2 879 aa10.91□□□□□ -0.66
UBA3-211ENST00000493957 C19orf25Q9UFG5 118 aaPredicted RBP10.91□□□□□ -0.66
UBA3-211ENST00000493957 STK38LQ9Y2H1 464 aa10.91□□□□□ -0.66
UBA3-211ENST00000493957 FIS1Q9Y3D6 152 aa10.91□□□□□ -0.66
UBA3-211ENST00000493957 PRRC2CQ9Y520 2896 aaKnown RBP10.91□□□□□ -0.66
UBA3-211ENST00000493957 FASNP49327 2511 aaKnown RBP10.91□□□□□ -0.66
UBA3-211ENST00000493957 NUP214P35658 2090 aaPredicted RBP10.9□□□□□ -0.66
UBA3-211ENST00000493957 SAGE2PA6NJ88 616 aa10.9□□□□□ -0.66
UBA3-211ENST00000493957 PYCARD-AS1I3L0S3 204 aa10.9□□□□□ -0.66
UBA3-211ENST00000493957 PCDH17O14917 1159 aa10.9□□□□□ -0.66
UBA3-211ENST00000493957 PROM1O43490 865 aa10.9□□□□□ -0.66
UBA3-211ENST00000493957 F10P00742 488 aa10.9□□□□□ -0.66
UBA3-211ENST00000493957 KRT6AP02538 564 aa10.9□□□□□ -0.66
UBA3-211ENST00000493957 KRT6BP04259 564 aa10.9□□□□□ -0.66
UBA3-211ENST00000493957 H2AFXP16104 143 aaPredicted RBP10.9□□□□□ -0.66
UBA3-211ENST00000493957 SOX11P35716 441 aa10.9□□□□□ -0.66
UBA3-211ENST00000493957 TSFMP43897 325 aaKnown RBP10.9□□□□□ -0.66
UBA3-211ENST00000493957 SERPINB4P48594 390 aa10.9□□□□□ -0.66
UBA3-211ENST00000493957 KRT6CP48668 564 aa10.9□□□□□ -0.66
UBA3-211ENST00000493957 HSD17B7P56937 341 aa10.9□□□□□ -0.66
UBA3-211ENST00000493957 SLC26A5P58743 744 aa10.9□□□□□ -0.66
UBA3-211ENST00000493957 RAE1P78406 368 aaKnown RBP10.9□□□□□ -0.66
UBA3-211ENST00000493957 BTKQ06187 659 aa10.9□□□□□ -0.66
UBA3-211ENST00000493957 CSTF3Q12996 717 aaKnown RBP10.9□□□□□ -0.66
UBA3-211ENST00000493957 ARL13AQ5H913 290 aaPredicted RBP10.9□□□□□ -0.66
UBA3-211ENST00000493957 PLAG1Q6DJT9 500 aa10.9□□□□□ -0.66
UBA3-211ENST00000493957 CYP20A1Q6UW02 462 aa10.9□□□□□ -0.66
UBA3-211ENST00000493957 DGAT2L6Q6ZPD8 337 aa10.9□□□□□ -0.66
UBA3-211ENST00000493957 CUZD1Q86UP6 607 aa10.9□□□□□ -0.66
UBA3-211ENST00000493957 GPR180Q86V85 440 aa10.9□□□□□ -0.66
UBA3-211ENST00000493957 NFAM1Q8NET5 270 aaPredicted RBP10.9□□□□□ -0.66
UBA3-211ENST00000493957 OR6Y1Q8NGX8 325 aa10.9□□□□□ -0.66
UBA3-211ENST00000493957 AGR3Q8TD06 166 aa10.9□□□□□ -0.66
UBA3-211ENST00000493957 ADAMTS18Q8TE60 1221 aa10.9□□□□□ -0.66
UBA3-211ENST00000493957 VPS50Q96JG6 964 aa10.9□□□□□ -0.66
UBA3-211ENST00000493957 ZNF395Q9H8N7 513 aaPredicted RBP10.9□□□□□ -0.66
UBA3-211ENST00000493957 TMBIM4Q9HC24 238 aa10.9□□□□□ -0.66
UBA3-211ENST00000493957 SSU72Q9NP77 194 aaKnown RBP10.9□□□□□ -0.66
UBA3-211ENST00000493957 GMPR2Q9P2T1 348 aaKnown RBP10.9□□□□□ -0.66
UBA3-211ENST00000493957 ZNF223Q9UK11 482 aaPredicted RBP10.9□□□□□ -0.66
UBA3-211ENST00000493957 MRPS33Q9Y291 106 aaKnown RBP10.9□□□□□ -0.66
UBA3-211ENST00000493957 ZNF451Q9Y4E5 1061 aa10.9□□□□□ -0.66
UBA3-211ENST00000493957 SPENQ96T58 3664 aaKnown RBP10.9□□□□□ -0.66
UBA3-211ENST00000493957 ZGRF1Q86YA3 2104 aa10.9□□□□□ -0.67
UBA3-211ENST00000493957 B8ZZF3 427 aa10.89□□□□□ -0.67
UBA3-211ENST00000493957 CLDN4O14493 209 aa10.89□□□□□ -0.67
UBA3-211ENST00000493957 PGRMC2O15173 223 aa10.89□□□□□ -0.67
UBA3-211ENST00000493957 ITM2AO43736 263 aa10.89□□□□□ -0.67
UBA3-211ENST00000493957 NPHS1O60500 1241 aa10.89□□□□□ -0.67
UBA3-211ENST00000493957 CTNSO60931 367 aa10.89□□□□□ -0.67
UBA3-211ENST00000493957 ULK1O75385 1050 aa10.89□□□□□ -0.67
UBA3-211ENST00000493957 CRCPO75575 148 aa10.89□□□□□ -0.67
UBA3-211ENST00000493957 LYPLA1O75608 230 aaPredicted RBP10.89□□□□□ -0.67
UBA3-211ENST00000493957 MYO1DO94832 1006 aa10.89□□□□□ -0.67
UBA3-211ENST00000493957 MYZAPP0CAP1 466 aa10.89□□□□□ -0.67
UBA3-211ENST00000493957 DHRS4L1P0CG22 281 aa10.89□□□□□ -0.67
UBA3-211ENST00000493957 NR2F6P10588 404 aa10.89□□□□□ -0.67
UBA3-211ENST00000493957 HSD3B1P14060 373 aa10.89□□□□□ -0.67
UBA3-211ENST00000493957 HSD3B2P26439 372 aa10.89□□□□□ -0.67
UBA3-211ENST00000493957 ARFIP1P53367 373 aa10.89□□□□□ -0.67
UBA3-211ENST00000493957 FOLH1Q04609 750 aa10.89□□□□□ -0.67
UBA3-211ENST00000493957 RCN2Q14257 317 aa10.89□□□□□ -0.67
UBA3-211ENST00000493957 CCNYL2Q5T2Q4 361 aa10.89□□□□□ -0.67
UBA3-211ENST00000493957 C10orf62Q5T681 223 aaPredicted RBP10.89□□□□□ -0.67
UBA3-211ENST00000493957 ZNF321PQ8N8H1 164 aa10.89□□□□□ -0.67
UBA3-211ENST00000493957 ANKRD42Q8N9B4 389 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms