RNA–Protein interactions for RNA: ENST00000492601.2

SGMS1-204, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-204ENST00000492601 SOX3P41225 446 aa16.03■□□□□ 0.16
SGMS1-204ENST00000492601 TMEM35AQ53FP2 167 aa16.03■□□□□ 0.16
SGMS1-204ENST00000492601 GRHL2Q6ISB3 625 aa16.03■□□□□ 0.16
SGMS1-204ENST00000492601 ZNF572Q7Z3I7 529 aaPredicted RBP16.03■□□□□ 0.16
SGMS1-204ENST00000492601 OR4N5Q8IXE1 308 aa16.03■□□□□ 0.16
SGMS1-204ENST00000492601 MORN4Q8NDC4 146 aa16.03■□□□□ 0.16
SGMS1-204ENST00000492601 PSD4Q8NDX1 1056 aa16.03■□□□□ 0.16
SGMS1-204ENST00000492601 CMTM7Q96FZ5 175 aa16.03■□□□□ 0.16
SGMS1-204ENST00000492601 RUBCNLQ9H714 662 aa16.03■□□□□ 0.16
SGMS1-204ENST00000492601 CHST11Q9NPF2 352 aa16.03■□□□□ 0.16
SGMS1-204ENST00000492601 SNX15Q9NRS6 342 aa16.03■□□□□ 0.16
SGMS1-204ENST00000492601 DEPPQ9NTK1 212 aa16.03■□□□□ 0.16
SGMS1-204ENST00000492601 HPF1Q9NWY4 346 aa16.03■□□□□ 0.16
SGMS1-204ENST00000492601 MYOTQ9UBF9 498 aa16.03■□□□□ 0.16
SGMS1-204ENST00000492601 ANGPTL3Q9Y5C1 460 aa16.03■□□□□ 0.16
SGMS1-204ENST00000492601 SPACA6W5XKT8 324 aa16.03■□□□□ 0.16
SGMS1-204ENST00000492601 PDZD2O15018 2839 aa16.03■□□□□ 0.16
SGMS1-204ENST00000492601 CSMD2Q7Z408 3487 aa16.03■□□□□ 0.16
SGMS1-204ENST00000492601 A0A087X1B8 175 aa16.02■□□□□ 0.16
SGMS1-204ENST00000492601 HMX2A2RU54 273 aa16.02■□□□□ 0.16
SGMS1-204ENST00000492601 LRRC14BA6NHZ5 514 aa16.02■□□□□ 0.16
SGMS1-204ENST00000492601 ENO4A6NNW6 628 aa16.02■□□□□ 0.16
SGMS1-204ENST00000492601 SYCE1LA8MT33 242 aa16.02■□□□□ 0.16
SGMS1-204ENST00000492601 G3V3Y1 287 aa16.02■□□□□ 0.16
SGMS1-204ENST00000492601 TUBB4AP04350 444 aa16.02■□□□□ 0.16
SGMS1-204ENST00000492601 TPOP07202 933 aa16.02■□□□□ 0.16
SGMS1-204ENST00000492601 GFAPP14136 432 aa16.02■□□□□ 0.16
SGMS1-204ENST00000492601 COX6B1P14854 86 aa16.02■□□□□ 0.16
SGMS1-204ENST00000492601 HK2P52789 917 aa16.02■□□□□ 0.16
SGMS1-204ENST00000492601 SERTAD2Q14140 314 aa16.02■□□□□ 0.16
SGMS1-204ENST00000492601 PFKFB4Q16877 469 aa16.02■□□□□ 0.16
SGMS1-204ENST00000492601 FAM83EQ2M2I3 478 aa16.02■□□□□ 0.16
SGMS1-204ENST00000492601 CMPK2Q5EBM0 449 aa16.02■□□□□ 0.16
SGMS1-204ENST00000492601 UBAP2Q5T6F2 1119 aaKnown RBP16.02■□□□□ 0.16
SGMS1-204ENST00000492601 KHDRBS2Q5VWX1 349 aaKnown RBP16.02■□□□□ 0.16
SGMS1-204ENST00000492601 C8orf74Q6P047 294 aa16.02■□□□□ 0.16
SGMS1-204ENST00000492601 HUS1BQ8NHY5 278 aa16.02■□□□□ 0.16
SGMS1-204ENST00000492601 SLC2A12Q8TD20 617 aa16.02■□□□□ 0.16
SGMS1-204ENST00000492601 ANKRD9Q96BM1 317 aaPredicted RBP16.02■□□□□ 0.16
SGMS1-204ENST00000492601 RASL10BQ96S79 203 aa16.02■□□□□ 0.16
SGMS1-204ENST00000492601 MTERF1Q99551 399 aaKnown RBP16.02■□□□□ 0.16
SGMS1-204ENST00000492601 LRRC1Q9BTT6 524 aa16.02■□□□□ 0.16
SGMS1-204ENST00000492601 ZDHHC18Q9NUE0 388 aa16.02■□□□□ 0.16
SGMS1-204ENST00000492601 A0A0G2JMM0 328 aa16.01■□□□□ 0.15
SGMS1-204ENST00000492601 A0A1W2PPB8 328 aa16.01■□□□□ 0.15
SGMS1-204ENST00000492601 A0A1W2PRS3 328 aa16.01■□□□□ 0.15
SGMS1-204ENST00000492601 PINLYPA6NC86 204 aa16.01■□□□□ 0.15
SGMS1-204ENST00000492601 SYNDIG1LA6NDD5 238 aa16.01■□□□□ 0.15
SGMS1-204ENST00000492601 KIR3DP1A8MWS1 328 aa16.01■□□□□ 0.15
SGMS1-204ENST00000492601 C19orf84I3L1E1 186 aa16.01■□□□□ 0.15
SGMS1-204ENST00000492601 ADAM10O14672 748 aa16.01■□□□□ 0.15
SGMS1-204ENST00000492601 FGF17O60258 216 aa16.01■□□□□ 0.15
SGMS1-204ENST00000492601 PDE9AO76083 593 aa16.01■□□□□ 0.15
SGMS1-204ENST00000492601 SCELO95171 688 aa16.01■□□□□ 0.15
SGMS1-204ENST00000492601 CLDN14O95500 239 aa16.01■□□□□ 0.15
SGMS1-204ENST00000492601 ETHE1O95571 254 aa16.01■□□□□ 0.15
SGMS1-204ENST00000492601 AGAP20933 346 aa16.01■□□□□ 0.15
SGMS1-204ENST00000492601 SERPINB1P30740 379 aa16.01■□□□□ 0.15
SGMS1-204ENST00000492601 PTGS2P35354 604 aa16.01■□□□□ 0.15
SGMS1-204ENST00000492601 NR0B1P51843 470 aaKnown RBP16.01■□□□□ 0.15
SGMS1-204ENST00000492601 RAP1GDS1P52306 607 aa16.01■□□□□ 0.15
SGMS1-204ENST00000492601 RNF4P78317 190 aa16.01■□□□□ 0.15
SGMS1-204ENST00000492601 CKAP4Q07065 602 aaKnown RBP16.01■□□□□ 0.15
SGMS1-204ENST00000492601 PCDH1Q08174 1060 aa16.01■□□□□ 0.15
SGMS1-204ENST00000492601 SLAMF1Q13291 335 aa16.01■□□□□ 0.15
SGMS1-204ENST00000492601 SETDB1Q15047 1291 aa16.01■□□□□ 0.15
SGMS1-204ENST00000492601 ZNF750Q32MQ0 723 aa16.01■□□□□ 0.15
SGMS1-204ENST00000492601 DEPDC1Q5TB30 811 aa16.01■□□□□ 0.15
SGMS1-204ENST00000492601 OR4C11Q6IEV9 310 aa16.01■□□□□ 0.15
SGMS1-204ENST00000492601 CD163Q86VB7 1156 aa16.01■□□□□ 0.15
SGMS1-204ENST00000492601 ZFP62Q8NB50 900 aaPredicted RBP16.01■□□□□ 0.15
SGMS1-204ENST00000492601 OR52N2Q8NGI0 321 aa16.01■□□□□ 0.15
SGMS1-204ENST00000492601 C16orf52Q8NHV5 167 aa16.01■□□□□ 0.15
SGMS1-204ENST00000492601 RHEBL1Q8TAI7 183 aa16.01■□□□□ 0.15
SGMS1-204ENST00000492601 RGMAQ96B86 450 aa16.01■□□□□ 0.15
SGMS1-204ENST00000492601 DEFB127Q9H1M4 99 aa16.01■□□□□ 0.15
SGMS1-204ENST00000492601 ACTR8Q9H981 624 aa16.01■□□□□ 0.15
SGMS1-204ENST00000492601 PPT2Q9UMR5 302 aa16.01■□□□□ 0.15
SGMS1-204ENST00000492601 CCDC168Q8NDH2 2452 aa16■□□□□ 0.15
SGMS1-204ENST00000492601 A0A096LPK6 155 aa16■□□□□ 0.15
SGMS1-204ENST00000492601 FAM166BA8MTA8 275 aa16■□□□□ 0.15
SGMS1-204ENST00000492601 E9PLN8 166 aa16■□□□□ 0.15
SGMS1-204ENST00000492601 RPS13P62277 151 aaKnown RBP16■□□□□ 0.15
SGMS1-204ENST00000492601 PLGLB1Q02325 96 aa16■□□□□ 0.15
SGMS1-204ENST00000492601 GPALPP1Q8IXQ4 340 aa16■□□□□ 0.15
SGMS1-204ENST00000492601 OR2M7Q8NG81 312 aa16■□□□□ 0.15
SGMS1-204ENST00000492601 FAM57AQ8TBR7 257 aa16■□□□□ 0.15
SGMS1-204ENST00000492601 DOK4Q8TEW6 326 aa16■□□□□ 0.15
SGMS1-204ENST00000492601 PPWD1Q96BP3 646 aaKnown RBP16■□□□□ 0.15
SGMS1-204ENST00000492601 MTFMTQ96DP5 389 aaKnown RBP16■□□□□ 0.15
SGMS1-204ENST00000492601 DMRTA2Q96SC8 542 aa16■□□□□ 0.15
SGMS1-204ENST00000492601 VKORC1Q9BQB6 163 aa16■□□□□ 0.15
SGMS1-204ENST00000492601 RPF2Q9H7B2 306 aaKnown RBP16■□□□□ 0.15
SGMS1-204ENST00000492601 DMRT3Q9NQL9 472 aa16■□□□□ 0.15
SGMS1-204ENST00000492601 NINJ2Q9NZG7 142 aa16■□□□□ 0.15
SGMS1-204ENST00000492601 CPSF2Q9P2I0 782 aaKnown RBP16■□□□□ 0.15
SGMS1-204ENST00000492601 COPS7AQ9UBW8 275 aa16■□□□□ 0.15
SGMS1-204ENST00000492601 ADGRE2Q9UHX3 823 aa16■□□□□ 0.15
SGMS1-204ENST00000492601 ANKRD17O75179 2603 aaKnown RBP15.99■□□□□ 0.15
SGMS1-204ENST00000492601 ARHGAP21Q5T5U3 1957 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms