RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 GPR180Q86V85 440 aa23.01■■□□□ 1.27
UPF3A-209ENST00000492270 LCA5Q86VQ0 697 aa23.01■■□□□ 1.27
UPF3A-209ENST00000492270 EPS8L3Q8TE67 593 aaKnown RBP23.01■■□□□ 1.27
UPF3A-209ENST00000492270 TRPC4APQ8TEL6 797 aa23.01■■□□□ 1.27
UPF3A-209ENST00000492270 PTPMT1Q8WUK0 201 aaPredicted RBP23.01■■□□□ 1.27
UPF3A-209ENST00000492270 SREK1Q8WXA9 508 aaKnown RBP23.01■■□□□ 1.27
UPF3A-209ENST00000492270 VMP1Q96GC9 406 aa23.01■■□□□ 1.27
UPF3A-209ENST00000492270 ERVK-6Q9BXR3 956 aa23.01■■□□□ 1.27
UPF3A-209ENST00000492270 KLHL1Q9NR64 748 aa23.01■■□□□ 1.27
UPF3A-209ENST00000492270 FARSBQ9NSD9 589 aaKnown RBP23.01■■□□□ 1.27
UPF3A-209ENST00000492270 VTI1BQ9UEU0 232 aa23.01■■□□□ 1.27
UPF3A-209ENST00000492270 EML6Q6ZMW3 1958 aa23■■□□□ 1.27
UPF3A-209ENST00000492270 NEURL1O76050 574 aa23■■□□□ 1.27
UPF3A-209ENST00000492270 AGFG2O95081 481 aa23■■□□□ 1.27
UPF3A-209ENST00000492270 RASAL1O95294 804 aa23■■□□□ 1.27
UPF3A-209ENST00000492270 GBAP04062 536 aa23■■□□□ 1.27
UPF3A-209ENST00000492270 RNF224P0DH78 156 aa23■■□□□ 1.27
UPF3A-209ENST00000492270 ARFIP1P53367 373 aa23■■□□□ 1.27
UPF3A-209ENST00000492270 ELOAQ14241 798 aaKnown RBP23■■□□□ 1.27
UPF3A-209ENST00000492270 SGO1Q5FBB7 561 aa23■■□□□ 1.27
UPF3A-209ENST00000492270 ZNF678Q5SXM1 525 aa23■■□□□ 1.27
UPF3A-209ENST00000492270 MRM1Q6IN84 353 aaKnown RBP23■■□□□ 1.27
UPF3A-209ENST00000492270 ZNF321PQ8N8H1 164 aa23■■□□□ 1.27
UPF3A-209ENST00000492270 SERPINI1Q99574 410 aa23■■□□□ 1.27
UPF3A-209ENST00000492270 DDX31Q9H8H2 851 aaKnown RBP23■■□□□ 1.27
UPF3A-209ENST00000492270 PSD3Q9NYI0 1048 aa23■■□□□ 1.27
UPF3A-209ENST00000492270 PHF11Q9UIL8 331 aa23■■□□□ 1.27
UPF3A-209ENST00000492270 EMCNQ9ULC0 261 aa23■■□□□ 1.27
UPF3A-209ENST00000492270 PPT2Q9UMR5 302 aa23■■□□□ 1.27
UPF3A-209ENST00000492270 ASB4Q9Y574 426 aa23■■□□□ 1.27
UPF3A-209ENST00000492270 BLACEA4D250 179 aa22.99■■□□□ 1.27
UPF3A-209ENST00000492270 SUPT7LO94864 414 aa22.99■■□□□ 1.27
UPF3A-209ENST00000492270 OR4F21O95013 312 aa22.99■■□□□ 1.27
UPF3A-209ENST00000492270 OTCP00480 354 aa22.99■■□□□ 1.27
UPF3A-209ENST00000492270 GSTA1P08263 222 aa22.99■■□□□ 1.27
UPF3A-209ENST00000492270 EDN3P14138 238 aa22.99■■□□□ 1.27
UPF3A-209ENST00000492270 HSD17B3P37058 310 aa22.99■■□□□ 1.27
UPF3A-209ENST00000492270 TDGF1P3P51864 188 aa22.99■■□□□ 1.27
UPF3A-209ENST00000492270 VSNL1P62760 191 aa22.99■■□□□ 1.27
UPF3A-209ENST00000492270 CLCQ05315 142 aa22.99■■□□□ 1.27
UPF3A-209ENST00000492270 IFT88Q13099 833 aa22.99■■□□□ 1.27
UPF3A-209ENST00000492270 ZNF227Q86WZ6 799 aa22.99■■□□□ 1.27
UPF3A-209ENST00000492270 NUDT13Q86X67 352 aa22.99■■□□□ 1.27
UPF3A-209ENST00000492270 ARMC10Q8N2F6 343 aa22.99■■□□□ 1.27
UPF3A-209ENST00000492270 TMEM132CQ8N3T6 1108 aa22.99■■□□□ 1.27
UPF3A-209ENST00000492270 SCMH1Q96GD3 660 aa22.99■■□□□ 1.27
UPF3A-209ENST00000492270 RPF2Q9H7B2 306 aaKnown RBP22.99■■□□□ 1.27
UPF3A-209ENST00000492270 MS4A12Q9NXJ0 267 aa22.99■■□□□ 1.27
UPF3A-209ENST00000492270 LRFN1Q9P244 771 aa22.99■■□□□ 1.27
UPF3A-209ENST00000492270 CLCA3PQ9Y6N3 262 aa22.99■■□□□ 1.27
UPF3A-209ENST00000492270 POLEQ07864 2286 aa22.98■■□□□ 1.27
UPF3A-209ENST00000492270 WASHC1A8K0Z3 465 aa22.98■■□□□ 1.27
UPF3A-209ENST00000492270 C17orf105B2RV13 164 aa22.98■■□□□ 1.27
UPF3A-209ENST00000492270 PROM1O43490 865 aa22.98■■□□□ 1.27
UPF3A-209ENST00000492270 FAM58BPP0C7Q3 252 aa22.98■■□□□ 1.27
UPF3A-209ENST00000492270 ATP5F1P24539 256 aaPredicted RBP22.98■■□□□ 1.27
UPF3A-209ENST00000492270 IGLV3-21P80748 117 aaPredicted RBP22.98■■□□□ 1.27
UPF3A-209ENST00000492270 FOLH1Q04609 750 aa22.98■■□□□ 1.27
UPF3A-209ENST00000492270 SERTAD2Q14140 314 aa22.98■■□□□ 1.27
UPF3A-209ENST00000492270 TCHHL1Q5QJ38 904 aaPredicted RBP22.98■■□□□ 1.27
UPF3A-209ENST00000492270 CYP20A1Q6UW02 462 aa22.98■■□□□ 1.27
UPF3A-209ENST00000492270 C16orf47Q6ZP98 133 aaPredicted RBP22.98■■□□□ 1.27
UPF3A-209ENST00000492270 SH2D5Q6ZV89 423 aa22.98■■□□□ 1.27
UPF3A-209ENST00000492270 OR14A16Q8NHC5 309 aa22.98■■□□□ 1.27
UPF3A-209ENST00000492270 NR4A3Q92570 626 aa22.98■■□□□ 1.27
UPF3A-209ENST00000492270 UCN3Q969E3 161 aa22.98■■□□□ 1.27
UPF3A-209ENST00000492270 MRPL1Q9BYD6 325 aaKnown RBP22.98■■□□□ 1.27
UPF3A-209ENST00000492270 OR8D2Q9GZM6 311 aa22.98■■□□□ 1.27
UPF3A-209ENST00000492270 ELOVL6Q9H5J4 265 aa22.98■■□□□ 1.27
UPF3A-209ENST00000492270 LIN28AQ9H9Z2 209 aaKnown RBP22.98■■□□□ 1.27
UPF3A-209ENST00000492270 LYARQ9NX58 379 aaKnown RBP22.98■■□□□ 1.27
UPF3A-209ENST00000492270 USP9YO00507 2555 aaPredicted RBP22.98■■□□□ 1.27
UPF3A-209ENST00000492270 A0A1W2PR48 441 aa22.97■■□□□ 1.27
UPF3A-209ENST00000492270 SYNDIG1LA6NDD5 238 aa22.97■■□□□ 1.27
UPF3A-209ENST00000492270 GLOD5A6NK44 160 aa22.97■■□□□ 1.27
UPF3A-209ENST00000492270 TMEM200CA6NKL6 621 aa22.97■■□□□ 1.27
UPF3A-209ENST00000492270 SEMA3DO95025 777 aa22.97■■□□□ 1.27
UPF3A-209ENST00000492270 DDAH2O95865 285 aa22.97■■□□□ 1.27
UPF3A-209ENST00000492270 PDYNP01213 254 aa22.97■■□□□ 1.27
UPF3A-209ENST00000492270 TNNI3P19429 210 aa22.97■■□□□ 1.27
UPF3A-209ENST00000492270 MST1P26927 711 aa22.97■■□□□ 1.27
UPF3A-209ENST00000492270 DGAT2L6Q6ZPD8 337 aa22.97■■□□□ 1.27
UPF3A-209ENST00000492270 TDRPQ86YL5 185 aa22.97■■□□□ 1.27
UPF3A-209ENST00000492270 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP22.97■■□□□ 1.27
UPF3A-209ENST00000492270 DAZLQ92904 295 aaKnown RBP22.97■■□□□ 1.27
UPF3A-209ENST00000492270 C5orf34Q96MH7 638 aa22.97■■□□□ 1.27
UPF3A-209ENST00000492270 HBEGFQ99075 208 aa22.97■■□□□ 1.27
UPF3A-209ENST00000492270 TRPS1Q9UHF7 1281 aa22.97■■□□□ 1.27
UPF3A-209ENST00000492270 PCDHGB6Q9Y5F9 930 aa22.97■■□□□ 1.27
UPF3A-209ENST00000492270 FCHO1O14526 889 aa22.96■■□□□ 1.27
UPF3A-209ENST00000492270 ITGA10O75578 1167 aa22.96■■□□□ 1.27
UPF3A-209ENST00000492270 WISP2O76076 250 aa22.96■■□□□ 1.27
UPF3A-209ENST00000492270 AIFM1O95831 613 aa22.96■■□□□ 1.27
UPF3A-209ENST00000492270 SP1P08047 785 aa22.96■■□□□ 1.27
UPF3A-209ENST00000492270 CD46P15529 392 aa22.96■■□□□ 1.27
UPF3A-209ENST00000492270 KRT15P19012 456 aa22.96■■□□□ 1.27
UPF3A-209ENST00000492270 IMPDH1P20839 514 aa22.96■■□□□ 1.27
UPF3A-209ENST00000492270 BUD31P41223 144 aaPredicted RBP22.96■■□□□ 1.27
UPF3A-209ENST00000492270 CYB561P49447 251 aa22.96■■□□□ 1.27
UPF3A-209ENST00000492270 GALNTL5Q7Z4T8 443 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms