RNA–Protein interactions for RNA: ENST00000492234.5

AGAP3-223, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, human

TSL 4

Gene AGAP3, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AGAP3-223	ENST00000492234	RPF2	Q9H7B2	306 aa	Known RBP	12.35	□□□□□ -0.43
AGAP3-223	ENST00000492234	LRTM1	Q9HBL6	345 aa		12.35	□□□□□ -0.43
AGAP3-223	ENST00000492234	PFDN4	Q9NQP4	134 aa		12.35	□□□□□ -0.43
AGAP3-223	ENST00000492234	INTS9	Q9NV88	658 aa	Known RBP	12.35	□□□□□ -0.43
AGAP3-223	ENST00000492234	PNPO	Q9NVS9	261 aa		12.35	□□□□□ -0.43
AGAP3-223	ENST00000492234	THAP1	Q9NVV9	213 aa		12.35	□□□□□ -0.43
AGAP3-223	ENST00000492234	C1orf109	Q9NX04	203 aa		12.35	□□□□□ -0.43
AGAP3-223	ENST00000492234	MCM8	Q9UJA3	840 aa		12.35	□□□□□ -0.43
AGAP3-223	ENST00000492234	LOC400499	M0QZD8	3231 aa		12.35	□□□□□ -0.43
AGAP3-223	ENST00000492234	NUP210L	Q5VU65	1888 aa		12.34	□□□□□ -0.43
AGAP3-223	ENST00000492234	LOC102723996	A0A087X1L8	192 aa		12.34	□□□□□ -0.43
AGAP3-223	ENST00000492234	IGHV1-45	A0A0A0MS14	117 aa		12.34	□□□□□ -0.43
AGAP3-223	ENST00000492234	PGRMC2	O15173	223 aa		12.34	□□□□□ -0.43
AGAP3-223	ENST00000492234	ATP8B1	O43520	1251 aa		12.34	□□□□□ -0.43
AGAP3-223	ENST00000492234	AIFM1	O95831	613 aa		12.34	□□□□□ -0.43
AGAP3-223	ENST00000492234	ANXA4	P09525	319 aa	Predicted RBP	12.34	□□□□□ -0.43
AGAP3-223	ENST00000492234	FAM87A	P0C7U9	286 aa		12.34	□□□□□ -0.43
AGAP3-223	ENST00000492234	NR2F6	P10588	404 aa		12.34	□□□□□ -0.43
AGAP3-223	ENST00000492234	KIT	P10721	976 aa		12.34	□□□□□ -0.43
AGAP3-223	ENST00000492234	COX6A1	P12074	109 aa		12.34	□□□□□ -0.43
AGAP3-223	ENST00000492234	TNNI3	P19429	210 aa		12.34	□□□□□ -0.43
AGAP3-223	ENST00000492234	NR1D1	P20393	614 aa		12.34	□□□□□ -0.43
AGAP3-223	ENST00000492234	ITGA3	P26006	1051 aa		12.34	□□□□□ -0.43
AGAP3-223	ENST00000492234	TIA1	P31483	386 aa	Known RBP eCLIP	12.34	□□□□□ -0.43
AGAP3-223	ENST00000492234	ALDH9A1	P49189	494 aa		12.34	□□□□□ -0.43
AGAP3-223	ENST00000492234	POLE2	P56282	527 aa		12.34	□□□□□ -0.43
AGAP3-223	ENST00000492234	RAE1	P78406	368 aa	Known RBP	12.34	□□□□□ -0.43
AGAP3-223	ENST00000492234	AIMP2	Q13155	320 aa	Known RBP	12.34	□□□□□ -0.43
AGAP3-223	ENST00000492234	RAPSN	Q13702	412 aa		12.34	□□□□□ -0.43
AGAP3-223	ENST00000492234	PCOLCE	Q15113	449 aa		12.34	□□□□□ -0.43
AGAP3-223	ENST00000492234	PDCD2	Q16342	344 aa	Predicted RBP	12.34	□□□□□ -0.43
AGAP3-223	ENST00000492234	GALNTL6	Q49A17	601 aa		12.34	□□□□□ -0.43
AGAP3-223	ENST00000492234	IRAK1BP1	Q5VVH5	260 aa		12.34	□□□□□ -0.43
AGAP3-223	ENST00000492234		Q6ZSR9	355 aa		12.34	□□□□□ -0.43
AGAP3-223	ENST00000492234	APLF	Q8IW19	511 aa	Predicted RBP	12.34	□□□□□ -0.43
AGAP3-223	ENST00000492234	SCUBE1	Q8IWY4	988 aa		12.34	□□□□□ -0.43
AGAP3-223	ENST00000492234	CDC26	Q8NHZ8	85 aa		12.34	□□□□□ -0.43
AGAP3-223	ENST00000492234	RAB3IL1	Q8TBN0	382 aa		12.34	□□□□□ -0.43
AGAP3-223	ENST00000492234	LRRC8C	Q8TDW0	803 aa		12.34	□□□□□ -0.43
AGAP3-223	ENST00000492234	TTC9	Q92623	222 aa		12.34	□□□□□ -0.43
AGAP3-223	ENST00000492234	UCN3	Q969E3	161 aa		12.34	□□□□□ -0.43
AGAP3-223	ENST00000492234	TM4SF18	Q96CE8	201 aa		12.34	□□□□□ -0.43
AGAP3-223	ENST00000492234	SORT1	Q99523	831 aa		12.34	□□□□□ -0.43
AGAP3-223	ENST00000492234	LPAR4	Q99677	370 aa		12.34	□□□□□ -0.43
AGAP3-223	ENST00000492234	FAIM2	Q9BWQ8	316 aa		12.34	□□□□□ -0.43
AGAP3-223	ENST00000492234	RIC8B	Q9NVN3	520 aa		12.34	□□□□□ -0.43
AGAP3-223	ENST00000492234	TEX10	Q9NXF1	929 aa	Predicted RBP	12.34	□□□□□ -0.43
AGAP3-223	ENST00000492234	G3BP2	Q9UN86	482 aa	Known RBP	12.34	□□□□□ -0.43
AGAP3-223	ENST00000492234	POLR3H	Q9Y535	204 aa	Predicted RBP	12.34	□□□□□ -0.43
AGAP3-223	ENST00000492234	ATP6AP2	A0A1C7CYW4	349 aa		12.33	□□□□□ -0.44
AGAP3-223	ENST00000492234	TCRBV16S1A1N1	A0A5B0	115 aa		12.33	□□□□□ -0.44
AGAP3-223	ENST00000492234	WASHC1	A8K0Z3	465 aa		12.33	□□□□□ -0.44
AGAP3-223	ENST00000492234	MKRN2OS	H3BPM6	223 aa		12.33	□□□□□ -0.44
AGAP3-223	ENST00000492234	ERVH48-1	M5A8F1	160 aa		12.33	□□□□□ -0.44
AGAP3-223	ENST00000492234	PEX11A	O75192	247 aa		12.33	□□□□□ -0.44
AGAP3-223	ENST00000492234	ATP6AP2	O75787	350 aa		12.33	□□□□□ -0.44
AGAP3-223	ENST00000492234	ICAM2	P13598	275 aa		12.33	□□□□□ -0.44
AGAP3-223	ENST00000492234	PIK3R1	P27986	724 aa		12.33	□□□□□ -0.44
AGAP3-223	ENST00000492234	PPP2R1B	P30154	601 aa		12.33	□□□□□ -0.44
AGAP3-223	ENST00000492234	TAS2R50	P59544	299 aa		12.33	□□□□□ -0.44
AGAP3-223	ENST00000492234	TRA2B	P62995	288 aa	Known RBP	12.33	□□□□□ -0.44
AGAP3-223	ENST00000492234	FOLH1	Q04609	750 aa		12.33	□□□□□ -0.44
AGAP3-223	ENST00000492234	SERTAD2	Q14140	314 aa		12.33	□□□□□ -0.44
AGAP3-223	ENST00000492234	BTBD16	Q32M84	506 aa		12.33	□□□□□ -0.44
AGAP3-223	ENST00000492234	NDUFAF5	Q5TEU4	345 aa		12.33	□□□□□ -0.44
AGAP3-223	ENST00000492234	NOXRED1	Q6NXP6	359 aa		12.33	□□□□□ -0.44
AGAP3-223	ENST00000492234	PAPD4	Q6PIY7	484 aa	Known RBP	12.33	□□□□□ -0.44
AGAP3-223	ENST00000492234	RIPOR1	Q6ZS17	1223 aa		12.33	□□□□□ -0.44
AGAP3-223	ENST00000492234	KBTBD2	Q8IY47	623 aa		12.33	□□□□□ -0.44
AGAP3-223	ENST00000492234	KIRREL3	Q8IZU9	778 aa		12.33	□□□□□ -0.44
AGAP3-223	ENST00000492234	GALNT16	Q8N428	558 aa		12.33	□□□□□ -0.44
AGAP3-223	ENST00000492234	OR2T11	Q8NH01	316 aa		12.33	□□□□□ -0.44
AGAP3-223	ENST00000492234	C16orf78	Q8WTQ4	265 aa		12.33	□□□□□ -0.44
AGAP3-223	ENST00000492234	ANKRD9	Q96BM1	317 aa	Predicted RBP	12.33	□□□□□ -0.44
AGAP3-223	ENST00000492234	THOC3	Q96J01	351 aa	Known RBP	12.33	□□□□□ -0.44
AGAP3-223	ENST00000492234	CCT7	Q99832	543 aa		12.33	□□□□□ -0.44
AGAP3-223	ENST00000492234	TUBB6	Q9BUF5	446 aa		12.33	□□□□□ -0.44
AGAP3-223	ENST00000492234	DLGAP4	Q9Y2H0	992 aa		12.33	□□□□□ -0.44
AGAP3-223	ENST00000492234	CCL27	Q9Y4X3	112 aa		12.33	□□□□□ -0.44
AGAP3-223	ENST00000492234	DOCK10	Q96BY6	2186 aa		12.33	□□□□□ -0.44
AGAP3-223	ENST00000492234	PCSK5	Q92824	1860 aa		12.32	□□□□□ -0.44
AGAP3-223	ENST00000492234	IGKV3D-11	A0A0A0MRZ8	115 aa		12.32	□□□□□ -0.44
AGAP3-223	ENST00000492234	TGFBR3L	H3BV60	316 aa		12.32	□□□□□ -0.44
AGAP3-223	ENST00000492234	FGF17	O60258	216 aa		12.32	□□□□□ -0.44
AGAP3-223	ENST00000492234	SNN	O75324	88 aa	Predicted RBP	12.32	□□□□□ -0.44
AGAP3-223	ENST00000492234	GPR75	O95800	540 aa		12.32	□□□□□ -0.44
AGAP3-223	ENST00000492234	IL3	P08700	152 aa		12.32	□□□□□ -0.44
AGAP3-223	ENST00000492234	RPL38	P63173	70 aa	Known RBP	12.32	□□□□□ -0.44
AGAP3-223	ENST00000492234	C2orf80	Q0P641	193 aa		12.32	□□□□□ -0.44
AGAP3-223	ENST00000492234	KCNAB2	Q13303	367 aa		12.32	□□□□□ -0.44
AGAP3-223	ENST00000492234	ATP6AP1L	Q52LC2	224 aa		12.32	□□□□□ -0.44
AGAP3-223	ENST00000492234	OR52E8	Q6IFG1	317 aa		12.32	□□□□□ -0.44
AGAP3-223	ENST00000492234	RNF165	Q6ZSG1	346 aa		12.32	□□□□□ -0.44
AGAP3-223	ENST00000492234	MMP21	Q8N119	569 aa		12.32	□□□□□ -0.44
AGAP3-223	ENST00000492234	AMER2	Q8N7J2	671 aa		12.32	□□□□□ -0.44
AGAP3-223	ENST00000492234	OR4K14	Q8NGD5	310 aa		12.32	□□□□□ -0.44
AGAP3-223	ENST00000492234	FAM76A	Q8TAV0	307 aa		12.32	□□□□□ -0.44
AGAP3-223	ENST00000492234	TUBGCP3	Q96CW5	907 aa		12.32	□□□□□ -0.44
AGAP3-223	ENST00000492234	C19orf60	Q96EN9	201 aa		12.32	□□□□□ -0.44
AGAP3-223	ENST00000492234	RBM18	Q96H35	190 aa	Known RBP	12.32	□□□□□ -0.44

Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms