RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 DNAJB6O75190 326 aa10.35□□□□□ -0.75
TMEM39A-211ENST00000491685 RDH16O75452 317 aa10.35□□□□□ -0.75
TMEM39A-211ENST00000491685 NSA2O95478 260 aaKnown RBP10.35□□□□□ -0.75
TMEM39A-211ENST00000491685 B3GALT4O96024 378 aa10.35□□□□□ -0.75
TMEM39A-211ENST00000491685 STSP08842 583 aa10.35□□□□□ -0.75
TMEM39A-211ENST00000491685 IL10P22301 178 aa10.35□□□□□ -0.75
TMEM39A-211ENST00000491685 SERPINB4P48594 390 aa10.35□□□□□ -0.75
TMEM39A-211ENST00000491685 GALNT1Q10472 559 aaPredicted RBP10.35□□□□□ -0.75
TMEM39A-211ENST00000491685 STX3Q13277 289 aa10.35□□□□□ -0.75
TMEM39A-211ENST00000491685 E2F2Q14209 437 aa10.35□□□□□ -0.75
TMEM39A-211ENST00000491685 RCN2Q14257 317 aa10.35□□□□□ -0.75
TMEM39A-211ENST00000491685 ZRSR2Q15696 482 aaKnown RBP10.35□□□□□ -0.75
TMEM39A-211ENST00000491685 MINDY4Q4G0A6 757 aa10.35□□□□□ -0.75
TMEM39A-211ENST00000491685 GGTA1PQ4G0N0 100 aa10.35□□□□□ -0.75
TMEM39A-211ENST00000491685 MFSD4BQ5TF39 518 aa10.35□□□□□ -0.75
TMEM39A-211ENST00000491685 ATG16L1Q676U5 607 aa10.35□□□□□ -0.75
TMEM39A-211ENST00000491685 TMEM214Q6NUQ4 689 aaKnown RBP10.35□□□□□ -0.75
TMEM39A-211ENST00000491685 ANKRD37Q7Z713 158 aa10.35□□□□□ -0.75
TMEM39A-211ENST00000491685 LAS2Q8IYD9 372 aa10.35□□□□□ -0.75
TMEM39A-211ENST00000491685 CLYBLQ8N0X4 340 aa10.35□□□□□ -0.75
TMEM39A-211ENST00000491685 SLC34A3Q8N130 599 aa10.35□□□□□ -0.75
TMEM39A-211ENST00000491685 AFAP1L2Q8N4X5 818 aa10.35□□□□□ -0.75
TMEM39A-211ENST00000491685 ZNF740Q8NDX6 193 aa10.35□□□□□ -0.75
TMEM39A-211ENST00000491685 C7orf57Q8NEG2 295 aa10.35□□□□□ -0.75
TMEM39A-211ENST00000491685 OR7G3Q8NG95 312 aa10.35□□□□□ -0.75
TMEM39A-211ENST00000491685 OR5T3Q8NGG3 340 aa10.35□□□□□ -0.75
TMEM39A-211ENST00000491685 OR51Q1Q8NH59 317 aa10.35□□□□□ -0.75
TMEM39A-211ENST00000491685 DYDC1Q8WWB3 177 aa10.35□□□□□ -0.75
TMEM39A-211ENST00000491685 SELENOMQ8WWX9 145 aa10.35□□□□□ -0.75
TMEM39A-211ENST00000491685 NR4A3Q92570 626 aa10.35□□□□□ -0.75
TMEM39A-211ENST00000491685 HAS2Q92819 552 aa10.35□□□□□ -0.75
TMEM39A-211ENST00000491685 ARL8AQ96BM9 186 aa10.35□□□□□ -0.75
TMEM39A-211ENST00000491685 MTFMTQ96DP5 389 aaKnown RBP10.35□□□□□ -0.75
TMEM39A-211ENST00000491685 MOCOSQ96EN8 888 aa10.35□□□□□ -0.75
TMEM39A-211ENST00000491685 SERPINI1Q99574 410 aa10.35□□□□□ -0.75
TMEM39A-211ENST00000491685 GATA5Q9BWX5 397 aaPredicted RBP10.35□□□□□ -0.75
TMEM39A-211ENST00000491685 REXO4Q9GZR2 422 aaKnown RBP10.35□□□□□ -0.75
TMEM39A-211ENST00000491685 SPNS1Q9H2V7 528 aa10.35□□□□□ -0.75
TMEM39A-211ENST00000491685 C12orf65Q9H3J6 166 aaKnown RBP10.35□□□□□ -0.75
TMEM39A-211ENST00000491685 ZBTB26Q9HCK0 441 aa10.35□□□□□ -0.75
TMEM39A-211ENST00000491685 ABI3Q9P2A4 366 aa10.35□□□□□ -0.75
TMEM39A-211ENST00000491685 RNF11Q9Y3C5 154 aa10.35□□□□□ -0.75
TMEM39A-211ENST00000491685 ASB1Q9Y576 335 aa10.35□□□□□ -0.75
TMEM39A-211ENST00000491685 PDZD2O15018 2839 aa10.34□□□□□ -0.75
TMEM39A-211ENST00000491685 MYO7BQ6PIF6 2116 aa10.34□□□□□ -0.75
TMEM39A-211ENST00000491685 NCOA6Q14686 2063 aaPredicted RBP10.34□□□□□ -0.75
TMEM39A-211ENST00000491685 TRAV17A0A0B4J275 112 aa10.34□□□□□ -0.75
TMEM39A-211ENST00000491685 LRIT2A6NDA9 550 aa10.34□□□□□ -0.75
TMEM39A-211ENST00000491685 OR5H15A6NDH6 313 aa10.34□□□□□ -0.75
TMEM39A-211ENST00000491685 CDC123O75794 336 aaPredicted RBP10.34□□□□□ -0.75
TMEM39A-211ENST00000491685 OR4F21O95013 312 aa10.34□□□□□ -0.75
TMEM39A-211ENST00000491685 HSPA4LO95757 839 aa10.34□□□□□ -0.75
TMEM39A-211ENST00000491685 TGFB1P01137 390 aa10.34□□□□□ -0.75
TMEM39A-211ENST00000491685 FGF4P08620 206 aa10.34□□□□□ -0.75
TMEM39A-211ENST00000491685 UROSP10746 265 aa10.34□□□□□ -0.75
TMEM39A-211ENST00000491685 PRF1P14222 555 aa10.34□□□□□ -0.75
TMEM39A-211ENST00000491685 ALOX12P18054 663 aa10.34□□□□□ -0.75
TMEM39A-211ENST00000491685 TSPAN8P19075 237 aa10.34□□□□□ -0.75
TMEM39A-211ENST00000491685 EPORP19235 508 aa10.34□□□□□ -0.75
TMEM39A-211ENST00000491685 ETV4P43268 484 aa10.34□□□□□ -0.75
TMEM39A-211ENST00000491685 XCR1P46094 333 aa10.34□□□□□ -0.75
TMEM39A-211ENST00000491685 RAP1GDS1P52306 607 aa10.34□□□□□ -0.75
TMEM39A-211ENST00000491685 ARFIP1P53367 373 aa10.34□□□□□ -0.75
TMEM39A-211ENST00000491685 PPP2R2AP63151 447 aa10.34□□□□□ -0.75
TMEM39A-211ENST00000491685 DDX39BQ13838 428 aaKnown RBP10.34□□□□□ -0.75
TMEM39A-211ENST00000491685 PCLAFQ15004 111 aa10.34□□□□□ -0.75
TMEM39A-211ENST00000491685 AP5B1Q2VPB7 878 aa10.34□□□□□ -0.75
TMEM39A-211ENST00000491685 TOR1AIP1Q5JTV8 583 aa10.34□□□□□ -0.75
TMEM39A-211ENST00000491685 DEPDC1Q5TB30 811 aa10.34□□□□□ -0.75
TMEM39A-211ENST00000491685 FRG2Q64ET8 278 aa10.34□□□□□ -0.75
TMEM39A-211ENST00000491685 BEST3Q8N1M1 668 aa10.34□□□□□ -0.75
TMEM39A-211ENST00000491685 GBP7Q8N8V2 638 aaPredicted RBP10.34□□□□□ -0.75
TMEM39A-211ENST00000491685 OR52B6Q8NGF0 335 aa10.34□□□□□ -0.75
TMEM39A-211ENST00000491685 FAM76AQ8TAV0 307 aa10.34□□□□□ -0.75
TMEM39A-211ENST00000491685 RAB3IL1Q8TBN0 382 aa10.34□□□□□ -0.75
TMEM39A-211ENST00000491685 CREB3L4Q8TEY5 395 aa10.34□□□□□ -0.75
TMEM39A-211ENST00000491685 TSLPQ969D9 159 aa10.34□□□□□ -0.75
TMEM39A-211ENST00000491685 RGMAQ96B86 450 aa10.34□□□□□ -0.75
TMEM39A-211ENST00000491685 NSUN5Q96P11 429 aaKnown RBP10.34□□□□□ -0.75
TMEM39A-211ENST00000491685 QRFPRQ96P65 431 aa10.34□□□□□ -0.75
TMEM39A-211ENST00000491685 CDK15Q96Q40 435 aa10.34□□□□□ -0.75
TMEM39A-211ENST00000491685 FRG2BQ96QU4 278 aa10.34□□□□□ -0.75
TMEM39A-211ENST00000491685 CCT7Q99832 543 aa10.34□□□□□ -0.75
TMEM39A-211ENST00000491685 TBCDQ9BTW9 1192 aa10.34□□□□□ -0.75
TMEM39A-211ENST00000491685 TUBB6Q9BUF5 446 aa10.34□□□□□ -0.75
TMEM39A-211ENST00000491685 HES7Q9BYE0 225 aa10.34□□□□□ -0.75
TMEM39A-211ENST00000491685 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.34□□□□□ -0.754e-6■■■■□ 22
TMEM39A-211ENST00000491685 RUBCNLQ9H714 662 aa10.34□□□□□ -0.75
TMEM39A-211ENST00000491685 COPS7BQ9H9Q2 264 aaPredicted RBP10.34□□□□□ -0.75
TMEM39A-211ENST00000491685 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.34□□□□□ -0.75
TMEM39A-211ENST00000491685 SPACA6W5XKT8 324 aa10.34□□□□□ -0.75
TMEM39A-211ENST00000491685 F8P00451 2351 aa10.34□□□□□ -0.75
TMEM39A-211ENST00000491685 CSMD2Q7Z408 3487 aa10.34□□□□□ -0.75
TMEM39A-211ENST00000491685 A0A1B0GUH1 482 aa10.33□□□□□ -0.76
TMEM39A-211ENST00000491685 ARHGAP10A1A4S6 786 aa10.33□□□□□ -0.76
TMEM39A-211ENST00000491685 TMEM114B3SHH9 223 aa10.33□□□□□ -0.76
TMEM39A-211ENST00000491685 CDK2AP1O14519 115 aa10.33□□□□□ -0.76
TMEM39A-211ENST00000491685 PRAMEF2O60811 474 aa10.33□□□□□ -0.76
TMEM39A-211ENST00000491685 CRYABP02511 175 aaKnown RBP10.33□□□□□ -0.76
TMEM39A-211ENST00000491685 SERPINE1P05121 402 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms