RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 MLYCDO95822 493 aa11.87□□□□□ -0.51
SEC61A1-206ENST00000491668 OTCP00480 354 aa11.87□□□□□ -0.51
SEC61A1-206ENST00000491668 RNH1P13489 461 aaKnown RBP11.87□□□□□ -0.51
SEC61A1-206ENST00000491668 TSPAN8P19075 237 aa11.87□□□□□ -0.51
SEC61A1-206ENST00000491668 COL8A1P27658 744 aa11.87□□□□□ -0.51
SEC61A1-206ENST00000491668 PPP2R1BP30154 601 aa11.87□□□□□ -0.51
SEC61A1-206ENST00000491668 ETV4P43268 484 aa11.87□□□□□ -0.51
SEC61A1-206ENST00000491668 CDH13P55290 713 aa11.87□□□□□ -0.51
SEC61A1-206ENST00000491668 SKP1P63208 163 aa11.87□□□□□ -0.51
SEC61A1-206ENST00000491668 CLCQ05315 142 aa11.87□□□□□ -0.51
SEC61A1-206ENST00000491668 ACTN3Q08043 901 aaPredicted RBP11.87□□□□□ -0.51
SEC61A1-206ENST00000491668 CHIT1Q13231 466 aa11.87□□□□□ -0.51
SEC61A1-206ENST00000491668 ELOAQ14241 798 aaKnown RBP11.87□□□□□ -0.51
SEC61A1-206ENST00000491668 C4orf17Q53FE4 359 aa11.87□□□□□ -0.51
SEC61A1-206ENST00000491668 PAGE2BQ5JRK9 111 aa11.87□□□□□ -0.51
SEC61A1-206ENST00000491668 ABHD17CQ6PCB6 329 aa11.87□□□□□ -0.51
SEC61A1-206ENST00000491668 RPS27LQ71UM5 84 aaKnown RBP11.87□□□□□ -0.51
SEC61A1-206ENST00000491668 ZNF227Q86WZ6 799 aa11.87□□□□□ -0.51
SEC61A1-206ENST00000491668 SCUBE1Q8IWY4 988 aa11.87□□□□□ -0.51
SEC61A1-206ENST00000491668 KRT78Q8N1N4 520 aa11.87□□□□□ -0.51
SEC61A1-206ENST00000491668 ARFGAP2Q8N6H7 521 aa11.87□□□□□ -0.51
SEC61A1-206ENST00000491668 TRPC4APQ8TEL6 797 aa11.87□□□□□ -0.51
SEC61A1-206ENST00000491668 ZNF354BQ96LW1 612 aa11.87□□□□□ -0.51
SEC61A1-206ENST00000491668 C5orf34Q96MH7 638 aa11.87□□□□□ -0.51
SEC61A1-206ENST00000491668 NSUN5Q96P11 429 aaKnown RBP11.87□□□□□ -0.51
SEC61A1-206ENST00000491668 NOL11Q9H8H0 719 aaKnown RBP11.87□□□□□ -0.51
SEC61A1-206ENST00000491668 PRDM9Q9NQV7 894 aa11.87□□□□□ -0.51
SEC61A1-206ENST00000491668 PRDM7Q9NQW5 492 aa11.87□□□□□ -0.51
SEC61A1-206ENST00000491668 TEKT2Q9UIF3 430 aa11.87□□□□□ -0.51
SEC61A1-206ENST00000491668 STK38LQ9Y2H1 464 aa11.87□□□□□ -0.51
SEC61A1-206ENST00000491668 DCHS2Q6V1P9 2916 aa11.86□□□□□ -0.51
SEC61A1-206ENST00000491668 URADA6NGE7 173 aa11.86□□□□□ -0.51
SEC61A1-206ENST00000491668 SAGE2PA6NJ88 616 aa11.86□□□□□ -0.51
SEC61A1-206ENST00000491668 A8MUA0 341 aa11.86□□□□□ -0.51
SEC61A1-206ENST00000491668 CYR61O00622 381 aa11.86□□□□□ -0.51
SEC61A1-206ENST00000491668 CRCPO75575 148 aa11.86□□□□□ -0.51
SEC61A1-206ENST00000491668 RPS17P08708 135 aaKnown RBP11.86□□□□□ -0.51
SEC61A1-206ENST00000491668 STSP08842 583 aa11.86□□□□□ -0.51
SEC61A1-206ENST00000491668 CERS1P27544 350 aa11.86□□□□□ -0.51
SEC61A1-206ENST00000491668 GSTM2P28161 218 aa11.86□□□□□ -0.51
SEC61A1-206ENST00000491668 CASP2P42575 452 aa11.86□□□□□ -0.51
SEC61A1-206ENST00000491668 PLA2G16P53816 162 aa11.86□□□□□ -0.51
SEC61A1-206ENST00000491668 STXBP1P61764 594 aaKnown RBP11.86□□□□□ -0.51
SEC61A1-206ENST00000491668 LAPTM5Q13571 262 aa11.86□□□□□ -0.51
SEC61A1-206ENST00000491668 OR1C1Q15619 314 aa11.86□□□□□ -0.51
SEC61A1-206ENST00000491668 CHI3L2Q15782 390 aa11.86□□□□□ -0.51
SEC61A1-206ENST00000491668 TBCCQ15814 346 aa11.86□□□□□ -0.51
SEC61A1-206ENST00000491668 MEP1AQ16819 746 aa11.86□□□□□ -0.51
SEC61A1-206ENST00000491668 UNC50Q53HI1 259 aa11.86□□□□□ -0.51
SEC61A1-206ENST00000491668 ZNF766Q5HY98 468 aa11.86□□□□□ -0.51
SEC61A1-206ENST00000491668 TTC19Q6DKK2 380 aaPredicted RBP11.86□□□□□ -0.51
SEC61A1-206ENST00000491668 SPINK14Q6IE38 97 aa11.86□□□□□ -0.51
SEC61A1-206ENST00000491668 ZCCHC23Q6ZST2 131 aa11.86□□□□□ -0.51
SEC61A1-206ENST00000491668 MILR1Q7Z6M3 343 aa11.86□□□□□ -0.51
SEC61A1-206ENST00000491668 TRIM42Q8IWZ5 723 aa11.86□□□□□ -0.51
SEC61A1-206ENST00000491668 ARMC10Q8N2F6 343 aa11.86□□□□□ -0.51
SEC61A1-206ENST00000491668 APCDD1LQ8NCL9 501 aa11.86□□□□□ -0.51
SEC61A1-206ENST00000491668 OR2L5Q8NG80 312 aa11.86□□□□□ -0.51
SEC61A1-206ENST00000491668 ZNF483Q8TF39 744 aaPredicted RBP11.86□□□□□ -0.51
SEC61A1-206ENST00000491668 PTCD3Q96EY7 689 aaKnown RBP11.86□□□□□ -0.51
SEC61A1-206ENST00000491668 SCMH1Q96GD3 660 aa11.86□□□□□ -0.51
SEC61A1-206ENST00000491668 SEC16BQ96JE7 1060 aa11.86□□□□□ -0.51
SEC61A1-206ENST00000491668 F2RL3Q96RI0 385 aa11.86□□□□□ -0.51
SEC61A1-206ENST00000491668 CSF3RQ99062 836 aa11.86□□□□□ -0.51
SEC61A1-206ENST00000491668 EFCAB11Q9BUY7 163 aa11.86□□□□□ -0.51
SEC61A1-206ENST00000491668 C1QTNF3Q9BXJ4 246 aa11.86□□□□□ -0.51
SEC61A1-206ENST00000491668 PITHD1Q9GZP4 211 aaPredicted RBP11.86□□□□□ -0.51
SEC61A1-206ENST00000491668 INTS9Q9NV88 658 aaKnown RBP11.86□□□□□ -0.51
SEC61A1-206ENST00000491668 KCMF1Q9P0J7 381 aa11.86□□□□□ -0.51
SEC61A1-206ENST00000491668 ABI3Q9P2A4 366 aa11.86□□□□□ -0.51
SEC61A1-206ENST00000491668 ZNF223Q9UK11 482 aaPredicted RBP11.86□□□□□ -0.51
SEC61A1-206ENST00000491668 TACC2O95359 2948 aa11.86□□□□□ -0.51
SEC61A1-206ENST00000491668 APCP25054 2843 aa11.86□□□□□ -0.51
SEC61A1-206ENST00000491668 ABCA12Q86UK0 2595 aa11.85□□□□□ -0.51
SEC61A1-206ENST00000491668 GABRR3A8MPY1 467 aa11.85□□□□□ -0.51
SEC61A1-206ENST00000491668 RASAL1O95294 804 aa11.85□□□□□ -0.51
SEC61A1-206ENST00000491668 CLDN9O95484 217 aa11.85□□□□□ -0.51
SEC61A1-206ENST00000491668 CHN1P15882 459 aa11.85□□□□□ -0.51
SEC61A1-206ENST00000491668 TPP2P29144 1249 aaPredicted RBP11.85□□□□□ -0.51
SEC61A1-206ENST00000491668 GPR143P51810 404 aa11.85□□□□□ -0.51
SEC61A1-206ENST00000491668 PCDH1Q08174 1060 aa11.85□□□□□ -0.51
SEC61A1-206ENST00000491668 LCP2Q13094 533 aa11.85□□□□□ -0.51
SEC61A1-206ENST00000491668 LIPJQ5W064 366 aa11.85□□□□□ -0.51
SEC61A1-206ENST00000491668 ZNF793Q6ZN11 406 aa11.85□□□□□ -0.51
SEC61A1-206ENST00000491668 GPRIN3Q6ZVF9 776 aa11.85□□□□□ -0.51
SEC61A1-206ENST00000491668 MAMDC2Q7Z304 686 aaPredicted RBP11.85□□□□□ -0.51
SEC61A1-206ENST00000491668 RPS19BP1Q86WX3 136 aaKnown RBP11.85□□□□□ -0.51
SEC61A1-206ENST00000491668 LGI4Q8N135 537 aa11.85□□□□□ -0.51
SEC61A1-206ENST00000491668 SLC5A8Q8N695 610 aa11.85□□□□□ -0.51
SEC61A1-206ENST00000491668 FAM47BQ8NA70 645 aa11.85□□□□□ -0.51
SEC61A1-206ENST00000491668 TTLQ8NG68 377 aa11.85□□□□□ -0.51
SEC61A1-206ENST00000491668 ZNF473Q8WTR7 871 aaKnown RBP11.85□□□□□ -0.51
SEC61A1-206ENST00000491668 CCT6BQ92526 530 aa11.85□□□□□ -0.51
SEC61A1-206ENST00000491668 UBE2E3Q969T4 207 aa11.85□□□□□ -0.51
SEC61A1-206ENST00000491668 UTP23Q9BRU9 249 aaKnown RBP11.85□□□□□ -0.51
SEC61A1-206ENST00000491668 TRMOQ9BU70 441 aa11.85□□□□□ -0.51
SEC61A1-206ENST00000491668 GATA5Q9BWX5 397 aaPredicted RBP11.85□□□□□ -0.51
SEC61A1-206ENST00000491668 NPLQ9BXD5 320 aaPredicted RBP11.85□□□□□ -0.51
SEC61A1-206ENST00000491668 REXO4Q9GZR2 422 aaKnown RBP11.85□□□□□ -0.51
SEC61A1-206ENST00000491668 CDCP1Q9H5V8 836 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms