RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 ARHGAP40Q5TG30 622 aa20.5■□□□□ 0.87
VCPKMT-204ENST00000491402 ZNF385CQ66K41 422 aaPredicted RBP20.5■□□□□ 0.87
VCPKMT-204ENST00000491402 OR8J2Q8NGG1 315 aa20.5■□□□□ 0.87
VCPKMT-204ENST00000491402 TSPEARQ8WU66 669 aa20.5■□□□□ 0.87
VCPKMT-204ENST00000491402 ZNF764Q96H86 408 aaPredicted RBP20.5■□□□□ 0.87
VCPKMT-204ENST00000491402 RPF2Q9H7B2 306 aaKnown RBP20.5■□□□□ 0.87
VCPKMT-204ENST00000491402 WDR41Q9HAD4 459 aa20.5■□□□□ 0.87
VCPKMT-204ENST00000491402 NEUROG3Q9Y4Z2 214 aa20.5■□□□□ 0.87
VCPKMT-204ENST00000491402 MED19A0JLT2 244 aaPredicted RBP20.49■□□□□ 0.87
VCPKMT-204ENST00000491402 TRABD2BA6NFA1 517 aa20.49■□□□□ 0.87
VCPKMT-204ENST00000491402 CCDC154A6NI56 674 aa20.49■□□□□ 0.87
VCPKMT-204ENST00000491402 WASHC1A8K0Z3 465 aa20.49■□□□□ 0.87
VCPKMT-204ENST00000491402 FAM227AF5H4B4 570 aa20.49■□□□□ 0.87
VCPKMT-204ENST00000491402 PGRMC2O15173 223 aa20.49■□□□□ 0.87
VCPKMT-204ENST00000491402 LAMP1P11279 417 aa20.49■□□□□ 0.87
VCPKMT-204ENST00000491402 XCR1P46094 333 aa20.49■□□□□ 0.87
VCPKMT-204ENST00000491402 ZNF385BQ569K4 471 aa20.49■□□□□ 0.87
VCPKMT-204ENST00000491402 SLC48A1Q6P1K1 146 aa20.49■□□□□ 0.87
VCPKMT-204ENST00000491402 ADAMTS18Q8TE60 1221 aa20.49■□□□□ 0.87
VCPKMT-204ENST00000491402 COQ8BQ96D53 544 aa20.49■□□□□ 0.87
VCPKMT-204ENST00000491402 RBCK1Q9BYM8 510 aa20.49■□□□□ 0.87
VCPKMT-204ENST00000491402 TAGLN3Q9UI15 199 aa20.49■□□□□ 0.87
VCPKMT-204ENST00000491402 MSRB2Q9Y3D2 182 aa20.49■□□□□ 0.87
VCPKMT-204ENST00000491402 PCDHGA3Q9Y5H0 932 aa20.49■□□□□ 0.87
VCPKMT-204ENST00000491402 DYTNA2CJ06 578 aa20.49■□□□□ 0.87
VCPKMT-204ENST00000491402 C9orf172C9J069 976 aa20.49■□□□□ 0.87
VCPKMT-204ENST00000491402 TBX19O60806 448 aa20.49■□□□□ 0.87
VCPKMT-204ENST00000491402 TNFSF15O95150 251 aa20.49■□□□□ 0.87
VCPKMT-204ENST00000491402 S100A3P33764 101 aa20.49■□□□□ 0.87
VCPKMT-204ENST00000491402 HNRNPFP52597 415 aaKnown RBP20.49■□□□□ 0.87
VCPKMT-204ENST00000491402 PHC1P78364 1004 aa20.49■□□□□ 0.87
VCPKMT-204ENST00000491402 DCDP81605 110 aaKnown RBP20.49■□□□□ 0.87
VCPKMT-204ENST00000491402 PRSS53Q2L4Q9 553 aa20.49■□□□□ 0.87
VCPKMT-204ENST00000491402 NKAIN1Q4KMZ8 207 aa20.49■□□□□ 0.87
VCPKMT-204ENST00000491402 TMEM52Q8NDY8 209 aa20.49■□□□□ 0.87
VCPKMT-204ENST00000491402 DNAJB14Q8TBM8 379 aa20.49■□□□□ 0.87
VCPKMT-204ENST00000491402 LRFN5Q96NI6 719 aa20.49■□□□□ 0.87
VCPKMT-204ENST00000491402 DUSP26Q9BV47 211 aa20.49■□□□□ 0.87
VCPKMT-204ENST00000491402 NRSN2Q9GZP1 204 aa20.49■□□□□ 0.87
VCPKMT-204ENST00000491402 PRDM9Q9NQV7 894 aa20.49■□□□□ 0.87
VCPKMT-204ENST00000491402 SLC22A11Q9NSA0 550 aa20.49■□□□□ 0.87
VCPKMT-204ENST00000491402 ATAD3AQ9NVI7 634 aa20.49■□□□□ 0.87
VCPKMT-204ENST00000491402 TRPC4Q9UBN4 977 aa20.49■□□□□ 0.87
VCPKMT-204ENST00000491402 UTS2RQ9UKP6 389 aa20.49■□□□□ 0.87
VCPKMT-204ENST00000491402 CES1P1Q9UKY3 287 aa20.49■□□□□ 0.87
VCPKMT-204ENST00000491402 NUP210LQ5VU65 1888 aa20.48■□□□□ 0.87
VCPKMT-204ENST00000491402 A0A1W2PP18 115 aa20.48■□□□□ 0.87
VCPKMT-204ENST00000491402 MEN1O00255 615 aa20.48■□□□□ 0.87
VCPKMT-204ENST00000491402 ACTN3Q08043 901 aaPredicted RBP20.48■□□□□ 0.87
VCPKMT-204ENST00000491402 TMEM164Q5U3C3 297 aa20.48■□□□□ 0.87
VCPKMT-204ENST00000491402 OR4F3Q6IEY1 312 aa20.48■□□□□ 0.87
VCPKMT-204ENST00000491402 OR52E8Q6IFG1 317 aa20.48■□□□□ 0.87
VCPKMT-204ENST00000491402 FAM180BQ6P0A1 224 aa20.48■□□□□ 0.87
VCPKMT-204ENST00000491402 COX15Q7KZN9 410 aa20.48■□□□□ 0.87
VCPKMT-204ENST00000491402 ERMP1Q7Z2K6 904 aa20.48■□□□□ 0.87
VCPKMT-204ENST00000491402 EXOSC8Q96B26 276 aaKnown RBP20.48■□□□□ 0.87
VCPKMT-204ENST00000491402 TBC1D20Q96BZ9 403 aa20.48■□□□□ 0.87
VCPKMT-204ENST00000491402 OR52E6Q96RD3 313 aa20.48■□□□□ 0.87
VCPKMT-204ENST00000491402 YIPF2Q9BWQ6 316 aa20.48■□□□□ 0.87
VCPKMT-204ENST00000491402 BHLHE41Q9C0J9 482 aaPredicted RBP20.48■□□□□ 0.87
VCPKMT-204ENST00000491402 TAS2R7Q9NYW3 318 aa20.48■□□□□ 0.87
VCPKMT-204ENST00000491402 PCDHGA8Q9Y5G5 932 aa20.48■□□□□ 0.87
VCPKMT-204ENST00000491402 ASPDHA6ND91 283 aa20.47■□□□□ 0.87
VCPKMT-204ENST00000491402 ANGPT2O15123 496 aa20.47■□□□□ 0.87
VCPKMT-204ENST00000491402 T-ENOLP0DO92 83 aa20.47■□□□□ 0.87
VCPKMT-204ENST00000491402 WNT3P56703 355 aa20.47■□□□□ 0.87
VCPKMT-204ENST00000491402 MPEG1Q2M385 716 aa20.47■□□□□ 0.87
VCPKMT-204ENST00000491402 NSL1Q96IY1 281 aa20.47■□□□□ 0.87
VCPKMT-204ENST00000491402 SLC46A1Q96NT5 459 aa20.47■□□□□ 0.87
VCPKMT-204ENST00000491402 OR1F2PQ96R84 312 aa20.47■□□□□ 0.87
VCPKMT-204ENST00000491402 NDUFAF1Q9Y375 327 aa20.47■□□□□ 0.87
VCPKMT-204ENST00000491402 AK5Q9Y6K8 562 aa20.47■□□□□ 0.87
VCPKMT-204ENST00000491402 SDK2Q58EX2 2172 aa20.47■□□□□ 0.87
VCPKMT-204ENST00000491402 NUP214P35658 2090 aaPredicted RBP20.47■□□□□ 0.87
VCPKMT-204ENST00000491402 FBP2O00757 339 aa20.46■□□□□ 0.87
VCPKMT-204ENST00000491402 CFLARO15519 480 aa20.46■□□□□ 0.87
VCPKMT-204ENST00000491402 CDC123O75794 336 aaPredicted RBP20.46■□□□□ 0.87
VCPKMT-204ENST00000491402 STK17BO94768 372 aa20.46■□□□□ 0.87
VCPKMT-204ENST00000491402 ONECUT2O95948 504 aa20.46■□□□□ 0.87
VCPKMT-204ENST00000491402 FHP07954 510 aa20.46■□□□□ 0.87
VCPKMT-204ENST00000491402 ESRRAP11474 423 aaPredicted RBP20.46■□□□□ 0.87
VCPKMT-204ENST00000491402 DDX5P17844 614 aaKnown RBP20.46■□□□□ 0.87
VCPKMT-204ENST00000491402 CALB2P22676 271 aa20.46■□□□□ 0.87
VCPKMT-204ENST00000491402 CPA2P48052 419 aa20.46■□□□□ 0.87
VCPKMT-204ENST00000491402 STX5Q13190 355 aa20.46■□□□□ 0.87
VCPKMT-204ENST00000491402 ERV3-1Q14264 604 aa20.46■□□□□ 0.87
VCPKMT-204ENST00000491402 CIDECQ96AQ7 238 aaPredicted RBP20.46■□□□□ 0.87
VCPKMT-204ENST00000491402 KLHL29Q96CT2 875 aa20.46■□□□□ 0.87
VCPKMT-204ENST00000491402 MKKSQ9NPJ1 570 aaPredicted RBP20.46■□□□□ 0.87
VCPKMT-204ENST00000491402 CTSFQ9UBX1 484 aa20.46■□□□□ 0.87
VCPKMT-204ENST00000491402 MRPS33Q9Y291 106 aaKnown RBP20.46■□□□□ 0.87
VCPKMT-204ENST00000491402 BBIP1A8MTZ0 92 aa20.46■□□□□ 0.87
VCPKMT-204ENST00000491402 KLK3P07288 261 aaPredicted RBP20.46■□□□□ 0.87
VCPKMT-204ENST00000491402 RBMS1P29558 406 aaKnown RBP20.46■□□□□ 0.87
VCPKMT-204ENST00000491402 BNIP1Q12981 228 aa20.46■□□□□ 0.87
VCPKMT-204ENST00000491402 TLR1Q15399 786 aa20.46■□□□□ 0.87
VCPKMT-204ENST00000491402 ZSCAN26Q16670 478 aa20.46■□□□□ 0.87
VCPKMT-204ENST00000491402 MMEL1Q495T6 779 aa20.46■□□□□ 0.87
VCPKMT-204ENST00000491402 RETREG3Q86VR2 466 aa20.46■□□□□ 0.87
VCPKMT-204ENST00000491402 ZNF595Q8IYB9 648 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms