RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 EIPR1Q53HC9 387 aa12.47□□□□□ -0.41
EXOSC3-207ENST00000490516 NHSL2Q5HYW2 709 aa12.47□□□□□ -0.41
EXOSC3-207ENST00000490516 LCTLQ6UWM7 567 aa12.47□□□□□ -0.41
EXOSC3-207ENST00000490516 ABHD11Q8NFV4 315 aa12.47□□□□□ -0.41
EXOSC3-207ENST00000490516 OR4K1Q8NGD4 311 aa12.47□□□□□ -0.41
EXOSC3-207ENST00000490516 ZPLD1Q8TCW7 415 aa12.47□□□□□ -0.41
EXOSC3-207ENST00000490516 SLC2A12Q8TD20 617 aa12.47□□□□□ -0.41
EXOSC3-207ENST00000490516 DAZLQ92904 295 aaKnown RBP12.47□□□□□ -0.41
EXOSC3-207ENST00000490516 ABTB1Q969K4 478 aaPredicted RBP12.47□□□□□ -0.41
EXOSC3-207ENST00000490516 SPACA9Q96E40 222 aaPredicted RBP12.47□□□□□ -0.41
EXOSC3-207ENST00000490516 ZNF597Q96LX8 424 aa12.47□□□□□ -0.41
EXOSC3-207ENST00000490516 ZFP3Q96NJ6 502 aa12.47□□□□□ -0.41
EXOSC3-207ENST00000490516 RUNDC3BQ96NL0 473 aa12.47□□□□□ -0.41
EXOSC3-207ENST00000490516 TM9SF2Q99805 663 aa12.47□□□□□ -0.41
EXOSC3-207ENST00000490516 TREX1Q9NSU2 369 aa12.47□□□□□ -0.41
EXOSC3-207ENST00000490516 ZFP69BQ9UJL9 534 aa12.47□□□□□ -0.41
EXOSC3-207ENST00000490516 CNOT11Q9UKZ1 510 aaKnown RBP12.47□□□□□ -0.41
EXOSC3-207ENST00000490516 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.47□□□□□ -0.41
EXOSC3-207ENST00000490516 MGAM2Q2M2H8 2515 aa12.46□□□□□ -0.41
EXOSC3-207ENST00000490516 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.46□□□□□ -0.41
EXOSC3-207ENST00000490516 A0A0G2JN53 185 aa12.46□□□□□ -0.41
EXOSC3-207ENST00000490516 TNFSF13O75888 250 aa12.46□□□□□ -0.41
EXOSC3-207ENST00000490516 MPC1LP0DKB6 136 aa12.46□□□□□ -0.41
EXOSC3-207ENST00000490516 ARNTP27540 789 aa12.46□□□□□ -0.41
EXOSC3-207ENST00000490516 NMBRP28336 390 aa12.46□□□□□ -0.41
EXOSC3-207ENST00000490516 UGT2B10P36537 528 aa12.46□□□□□ -0.41
EXOSC3-207ENST00000490516 SCTRP47872 440 aa12.46□□□□□ -0.41
EXOSC3-207ENST00000490516 NAGLUP54802 743 aa12.46□□□□□ -0.41
EXOSC3-207ENST00000490516 BTN3A2P78410 334 aa12.46□□□□□ -0.41
EXOSC3-207ENST00000490516 TBL3Q12788 808 aaKnown RBP12.46□□□□□ -0.41
EXOSC3-207ENST00000490516 TCEAL1Q15170 157 aa12.46□□□□□ -0.41
EXOSC3-207ENST00000490516 ETFDHQ16134 617 aa12.46□□□□□ -0.41
EXOSC3-207ENST00000490516 TOR1AIP1Q5JTV8 583 aa12.46□□□□□ -0.41
EXOSC3-207ENST00000490516 UBAP2Q5T6F2 1119 aaKnown RBP12.46□□□□□ -0.41
EXOSC3-207ENST00000490516 AGTRAPQ6RW13 159 aa12.46□□□□□ -0.41
EXOSC3-207ENST00000490516 ZNF704Q6ZNC4 412 aaPredicted RBP12.46□□□□□ -0.41
EXOSC3-207ENST00000490516 PIWIL4Q7Z3Z4 852 aaKnown RBP12.46□□□□□ -0.41
EXOSC3-207ENST00000490516 STRA8Q7Z7C7 330 aa12.46□□□□□ -0.41
EXOSC3-207ENST00000490516 KIAA1328Q86T90 577 aa12.46□□□□□ -0.41
EXOSC3-207ENST00000490516 ARIH2OSQ8N7S6 290 aa12.46□□□□□ -0.41
EXOSC3-207ENST00000490516 ZNF611Q8N823 705 aa12.46□□□□□ -0.41
EXOSC3-207ENST00000490516 ANKRD53Q8N9V6 530 aa12.46□□□□□ -0.41
EXOSC3-207ENST00000490516 OR14A16Q8NHC5 309 aa12.46□□□□□ -0.41
EXOSC3-207ENST00000490516 GABPB2Q8TAK5 448 aaPredicted RBP12.46□□□□□ -0.41
EXOSC3-207ENST00000490516 SGPP1Q9BX95 441 aa12.46□□□□□ -0.41
EXOSC3-207ENST00000490516 SHARPINQ9H0F6 387 aa12.46□□□□□ -0.41
EXOSC3-207ENST00000490516 SLCO5A1Q9H2Y9 848 aa12.46□□□□□ -0.41
EXOSC3-207ENST00000490516 UBQLN3Q9H347 655 aa12.46□□□□□ -0.41
EXOSC3-207ENST00000490516 ETNK1Q9HBU6 452 aa12.46□□□□□ -0.41
EXOSC3-207ENST00000490516 CNIH4Q9P003 139 aa12.46□□□□□ -0.41
EXOSC3-207ENST00000490516 EFR3BQ9Y2G0 817 aa12.46□□□□□ -0.41
EXOSC3-207ENST00000490516 FREM1Q5H8C1 2179 aa12.46□□□□□ -0.42
EXOSC3-207ENST00000490516 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.45□□□□□ -0.42
EXOSC3-207ENST00000490516 C17orf105B2RV13 164 aa12.45□□□□□ -0.42
EXOSC3-207ENST00000490516 HS3ST1O14792 307 aa12.45□□□□□ -0.42
EXOSC3-207ENST00000490516 MSTNO14793 375 aa12.45□□□□□ -0.42
EXOSC3-207ENST00000490516 F7P08709 466 aaPredicted RBP12.45□□□□□ -0.42
EXOSC3-207ENST00000490516 TNNI3P19429 210 aa12.45□□□□□ -0.42
EXOSC3-207ENST00000490516 RAB38P57729 211 aa12.45□□□□□ -0.42
EXOSC3-207ENST00000490516 RPS4XP62701 263 aaKnown RBP12.45□□□□□ -0.42
EXOSC3-207ENST00000490516 SRYQ05066 204 aa12.45□□□□□ -0.42
EXOSC3-207ENST00000490516 TOMM20Q15388 145 aa12.45□□□□□ -0.42
EXOSC3-207ENST00000490516 ANKRD34AQ69YU3 496 aa12.45□□□□□ -0.42
EXOSC3-207ENST00000490516 BICRALQ6AI39 1079 aa12.45□□□□□ -0.42
EXOSC3-207ENST00000490516 ZNF474Q6S9Z5 364 aaPredicted RBP12.45□□□□□ -0.42
EXOSC3-207ENST00000490516 DNM1P46Q6ZS02 220 aa12.45□□□□□ -0.42
EXOSC3-207ENST00000490516 CLEC17AQ6ZS10 378 aa12.45□□□□□ -0.42
EXOSC3-207ENST00000490516 ZNF721Q8TF20 911 aa12.45□□□□□ -0.42
EXOSC3-207ENST00000490516 PYCR2Q96C36 320 aa12.45□□□□□ -0.42
EXOSC3-207ENST00000490516 ART5Q96L15 291 aa12.45□□□□□ -0.42
EXOSC3-207ENST00000490516 GNRHR2Q96P88 292 aa12.45□□□□□ -0.42
EXOSC3-207ENST00000490516 ALOXE3Q9BYJ1 711 aa12.45□□□□□ -0.42
EXOSC3-207ENST00000490516 ADAM19Q9H013 955 aa12.45□□□□□ -0.42
EXOSC3-207ENST00000490516 EIF2B3Q9NR50 452 aaKnown RBP12.45□□□□□ -0.42
EXOSC3-207ENST00000490516 TMEM160Q9NX00 188 aa12.45□□□□□ -0.42
EXOSC3-207ENST00000490516 LPAR3Q9UBY5 353 aa12.45□□□□□ -0.42
EXOSC3-207ENST00000490516 VTI1BQ9UEU0 232 aa12.45□□□□□ -0.42
EXOSC3-207ENST00000490516 ADAMTS6Q9UKP5 1117 aa12.45□□□□□ -0.42
EXOSC3-207ENST00000490516 PCDHA13Q9Y5I0 950 aa12.45□□□□□ -0.42
EXOSC3-207ENST00000490516 PRR14LQ5THK1 2151 aa12.45□□□□□ -0.42
EXOSC3-207ENST00000490516 MALRD1Q5VYJ5 2156 aa12.45□□□□□ -0.42
EXOSC3-207ENST00000490516 A0A1W2PNV4 684 aa12.44□□□□□ -0.42
EXOSC3-207ENST00000490516 URADA6NGE7 173 aa12.44□□□□□ -0.42
EXOSC3-207ENST00000490516 ERI2A8K979 691 aaKnown RBP12.44□□□□□ -0.42
EXOSC3-207ENST00000490516 SMTNL1A8MU46 457 aa12.44□□□□□ -0.42
EXOSC3-207ENST00000490516 OVOL3O00110 214 aa12.44□□□□□ -0.42
EXOSC3-207ENST00000490516 KLF4O43474 513 aa12.44□□□□□ -0.42
EXOSC3-207ENST00000490516 VAPBO95292 243 aa12.44□□□□□ -0.42
EXOSC3-207ENST00000490516 ETHE1O95571 254 aa12.44□□□□□ -0.42
EXOSC3-207ENST00000490516 EGR1P18146 543 aa12.44□□□□□ -0.42
EXOSC3-207ENST00000490516 RPL22P35268 128 aaKnown RBP12.44□□□□□ -0.42
EXOSC3-207ENST00000490516 AHRP35869 848 aa12.44□□□□□ -0.42
EXOSC3-207ENST00000490516 CDKN1AP38936 164 aa12.44□□□□□ -0.42
EXOSC3-207ENST00000490516 IQCB1Q15051 598 aa12.44□□□□□ -0.42
EXOSC3-207ENST00000490516 TTLL9Q3SXZ7 439 aa12.44□□□□□ -0.42
EXOSC3-207ENST00000490516 BBS9Q3SYG4 887 aa12.44□□□□□ -0.42
EXOSC3-207ENST00000490516 PCID2Q5JVF3 399 aa12.44□□□□□ -0.42
EXOSC3-207ENST00000490516 FNDC7Q5VTL7 733 aa12.44□□□□□ -0.42
EXOSC3-207ENST00000490516 MRNIPQ6NTE8 343 aa12.44□□□□□ -0.42
EXOSC3-207ENST00000490516 VWA1Q6PCB0 445 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms