RNA–Protein interactions for RNA: ENST00000489544.1

SF1-218, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-218ENST00000489544 ANKRD37Q7Z713 158 aa7.78□□□□□ -1.16
SF1-218ENST00000489544 MRGPREQ86SM8 312 aa7.78□□□□□ -1.16
SF1-218ENST00000489544 CRLF3Q8IUI8 442 aa7.78□□□□□ -1.16
SF1-218ENST00000489544 SCUBE1Q8IWY4 988 aa7.78□□□□□ -1.16
SF1-218ENST00000489544 ZSCAN1Q8NBB4 408 aa7.78□□□□□ -1.16
SF1-218ENST00000489544 OR11G2Q8NGC1 345 aa7.78□□□□□ -1.16
SF1-218ENST00000489544 C16orf78Q8WTQ4 265 aa7.78□□□□□ -1.16
SF1-218ENST00000489544 GFM2Q969S9 779 aaKnown RBP7.78□□□□□ -1.16
SF1-218ENST00000489544 ANKRD9Q96BM1 317 aaPredicted RBP7.78□□□□□ -1.16
SF1-218ENST00000489544 TUBGCP3Q96CW5 907 aa7.78□□□□□ -1.16
SF1-218ENST00000489544 C1orf50Q9BV19 199 aa7.78□□□□□ -1.16
SF1-218ENST00000489544 TRIM55Q9BYV6 548 aa7.78□□□□□ -1.16
SF1-218ENST00000489544 WDR55Q9H6Y2 383 aaPredicted RBP7.78□□□□□ -1.16
SF1-218ENST00000489544 RPF2Q9H7B2 306 aaKnown RBP7.78□□□□□ -1.16
SF1-218ENST00000489544 AKTIPQ9H8T0 292 aa7.78□□□□□ -1.16
SF1-218ENST00000489544 CLK4Q9HAZ1 481 aaKnown RBP7.78□□□□□ -1.16
SF1-218ENST00000489544 PRDM9Q9NQV7 894 aa7.78□□□□□ -1.16
SF1-218ENST00000489544 SEMA3GQ9NS98 782 aa7.78□□□□□ -1.16
SF1-218ENST00000489544 NMRK1Q9NWW6 199 aa7.78□□□□□ -1.16
SF1-218ENST00000489544 C1orf109Q9NX04 203 aa7.78□□□□□ -1.16
SF1-218ENST00000489544 LYARQ9NX58 379 aaKnown RBP7.78□□□□□ -1.16
SF1-218ENST00000489544 P4HTMQ9NXG6 502 aa7.78□□□□□ -1.16
SF1-218ENST00000489544 PHF11Q9UIL8 331 aa7.78□□□□□ -1.16
SF1-218ENST00000489544 MCM8Q9UJA3 840 aa7.78□□□□□ -1.16
SF1-218ENST00000489544 FBXL4Q9UKA2 621 aa7.78□□□□□ -1.16
SF1-218ENST00000489544 ADAM29Q9UKF5 820 aa7.78□□□□□ -1.16
SF1-218ENST00000489544 ANKRD11Q6UB99 2663 aaPredicted RBP7.78□□□□□ -1.16
SF1-218ENST00000489544 NBEAQ8NFP9 2946 aa7.77□□□□□ -1.17
SF1-218ENST00000489544 USP24Q9UPU5 2620 aa7.77□□□□□ -1.17
SF1-218ENST00000489544 PTPRQQ9UMZ3 2332 aa7.77□□□□□ -1.17
SF1-218ENST00000489544 IGKV3D-11A0A0A0MRZ8 115 aa7.77□□□□□ -1.17
SF1-218ENST00000489544 A6NL46 340 aa7.77□□□□□ -1.17
SF1-218ENST00000489544 NPIPB8E9PQR5 432 aa7.77□□□□□ -1.17
SF1-218ENST00000489544 SDHDO14521 159 aa7.77□□□□□ -1.17
SF1-218ENST00000489544 HDAC3O15379 428 aa7.77□□□□□ -1.17
SF1-218ENST00000489544 CTNSO60931 367 aa7.77□□□□□ -1.17
SF1-218ENST00000489544 LRATO95237 230 aa7.77□□□□□ -1.17
SF1-218ENST00000489544 CD63P08962 238 aa7.77□□□□□ -1.17
SF1-218ENST00000489544 COX6A1P12074 109 aa7.77□□□□□ -1.17
SF1-218ENST00000489544 SDC1P18827 310 aa7.77□□□□□ -1.17
SF1-218ENST00000489544 IL10P22301 178 aa7.77□□□□□ -1.17
SF1-218ENST00000489544 PRPH2P23942 346 aa7.77□□□□□ -1.17
SF1-218ENST00000489544 EPHA3P29320 983 aa7.77□□□□□ -1.17
SF1-218ENST00000489544 BUD31P41223 144 aaPredicted RBP7.77□□□□□ -1.17
SF1-218ENST00000489544 ARFIP1P53367 373 aa7.77□□□□□ -1.17
SF1-218ENST00000489544 UCNP55089 124 aa7.77□□□□□ -1.17
SF1-218ENST00000489544 FOLH1Q04609 750 aa7.77□□□□□ -1.17
SF1-218ENST00000489544 DUSP2Q05923 314 aa7.77□□□□□ -1.17
SF1-218ENST00000489544 C2orf80Q0P641 193 aa7.77□□□□□ -1.17
SF1-218ENST00000489544 Q0VFX4 171 aa7.77□□□□□ -1.17
SF1-218ENST00000489544 RAPSNQ13702 412 aa7.77□□□□□ -1.17
SF1-218ENST00000489544 PCOLCEQ15113 449 aa7.77□□□□□ -1.17
SF1-218ENST00000489544 SFT2D3Q587I9 215 aa7.77□□□□□ -1.17
SF1-218ENST00000489544 C6orf136Q5SQH8 315 aa7.77□□□□□ -1.17
SF1-218ENST00000489544 ANKRD26P1Q6NSI1 321 aa7.77□□□□□ -1.17
SF1-218ENST00000489544 GALNT18Q6P9A2 607 aa7.77□□□□□ -1.17
SF1-218ENST00000489544 TMEM205Q6UW68 189 aa7.77□□□□□ -1.17
SF1-218ENST00000489544 DGAT2L6Q6ZPD8 337 aa7.77□□□□□ -1.17
SF1-218ENST00000489544 QSOX2Q6ZRP7 698 aa7.77□□□□□ -1.17
SF1-218ENST00000489544 RAB43Q86YS6 212 aa7.77□□□□□ -1.17
SF1-218ENST00000489544 ARFGAP2Q8N6H7 521 aa7.77□□□□□ -1.17
SF1-218ENST00000489544 FNDC5Q8NAU1 212 aa7.77□□□□□ -1.17
SF1-218ENST00000489544 PLPP5Q8NEB5 264 aa7.77□□□□□ -1.17
SF1-218ENST00000489544 FAM76AQ8TAV0 307 aa7.77□□□□□ -1.17
SF1-218ENST00000489544 METTL21AQ8WXB1 218 aa7.77□□□□□ -1.17
SF1-218ENST00000489544 EXTL1Q92935 676 aa7.77□□□□□ -1.17
SF1-218ENST00000489544 PPWD1Q96BP3 646 aaKnown RBP7.77□□□□□ -1.17
SF1-218ENST00000489544 C7orf26Q96N11 449 aa7.77□□□□□ -1.17
SF1-218ENST00000489544 TSSK3Q96PN8 268 aa7.77□□□□□ -1.17
SF1-218ENST00000489544 WDR77Q9BQA1 342 aaPredicted RBP7.77□□□□□ -1.17
SF1-218ENST00000489544 PRORYQ9H606 182 aa7.77□□□□□ -1.17
SF1-218ENST00000489544 MEAF6Q9HAF1 191 aa7.77□□□□□ -1.17
SF1-218ENST00000489544 ZNF160Q9HCG1 818 aa7.77□□□□□ -1.17
SF1-218ENST00000489544 PNO1Q9NRX1 252 aaKnown RBP7.77□□□□□ -1.17
SF1-218ENST00000489544 EXO1Q9UQ84 846 aaKnown RBP7.77□□□□□ -1.17
SF1-218ENST00000489544 POLHQ9Y253 713 aa7.77□□□□□ -1.17
SF1-218ENST00000489544 MAN2B2Q9Y2E5 1009 aa7.77□□□□□ -1.17
SF1-218ENST00000489544 PCDHA9Q9Y5H5 950 aa7.77□□□□□ -1.17
SF1-218ENST00000489544 USH1CQ9Y6N9 552 aa7.77□□□□□ -1.17
SF1-218ENST00000489544 SPACA6W5XKT8 324 aa7.77□□□□□ -1.17
SF1-218ENST00000489544 LOC400499M0QZD8 3231 aa7.76□□□□□ -1.17
SF1-218ENST00000489544 LOC102723996A0A087X1L8 192 aa7.76□□□□□ -1.17
SF1-218ENST00000489544 IGHV1-45A0A0A0MS14 117 aa7.76□□□□□ -1.17
SF1-218ENST00000489544 TCRBV16S1A1N1A0A5B0 115 aa7.76□□□□□ -1.17
SF1-218ENST00000489544 PEX12O00623 359 aa7.76□□□□□ -1.17
SF1-218ENST00000489544 CLDN4O14493 209 aa7.76□□□□□ -1.17
SF1-218ENST00000489544 AKAP10O43572 662 aa7.76□□□□□ -1.17
SF1-218ENST00000489544 ERAL1O75616 437 aaKnown RBP7.76□□□□□ -1.17
SF1-218ENST00000489544 MYO1DO94832 1006 aa7.76□□□□□ -1.17
SF1-218ENST00000489544 SNUPNO95149 360 aaKnown RBP7.76□□□□□ -1.17
SF1-218ENST00000489544 IFNA16P05015 189 aa7.76□□□□□ -1.17
SF1-218ENST00000489544 PRR35P0CG20 571 aa7.76□□□□□ -1.17
SF1-218ENST00000489544 BCKDHAP12694 445 aa7.76□□□□□ -1.17
SF1-218ENST00000489544 ACPPP15309 386 aa7.76□□□□□ -1.17
SF1-218ENST00000489544 TLX1P31314 330 aaPredicted RBP7.76□□□□□ -1.17
SF1-218ENST00000489544 FEN1P39748 380 aaKnown RBP7.76□□□□□ -1.17
SF1-218ENST00000489544 MDH1P40925 334 aaKnown RBP7.76□□□□□ -1.17
SF1-218ENST00000489544 ST13P50502 369 aaKnown RBP7.76□□□□□ -1.17
SF1-218ENST00000489544 DIO3P55073 304 aa7.76□□□□□ -1.17
SF1-218ENST00000489544 HSD17B7P56937 341 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms