RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 PRKDCP78527 4128 aaKnown RBP10.48□□□□□ -0.73
HDAC6-233ENST00000489352 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.47□□□□□ -0.73
HDAC6-233ENST00000489352 SLC35F4A4IF30 521 aa10.47□□□□□ -0.73
HDAC6-233ENST00000489352 TGFBR3LH3BV60 316 aa10.47□□□□□ -0.73
HDAC6-233ENST00000489352 CLOCKO15516 846 aa10.47□□□□□ -0.73
HDAC6-233ENST00000489352 NRDCO43847 1150 aa10.47□□□□□ -0.73
HDAC6-233ENST00000489352 TNFSF13O75888 250 aa10.47□□□□□ -0.73
HDAC6-233ENST00000489352 LRATO95237 230 aa10.47□□□□□ -0.73
HDAC6-233ENST00000489352 CRHP06850 196 aa10.47□□□□□ -0.73
HDAC6-233ENST00000489352 CCDC166P0CW27 439 aa10.47□□□□□ -0.73
HDAC6-233ENST00000489352 TTPAP49638 278 aa10.47□□□□□ -0.73
HDAC6-233ENST00000489352 PRAMEP78395 509 aa10.47□□□□□ -0.73
HDAC6-233ENST00000489352 PCDH1Q08174 1060 aa10.47□□□□□ -0.73
HDAC6-233ENST00000489352 PWP1Q13610 501 aa10.47□□□□□ -0.73
HDAC6-233ENST00000489352 MPEG1Q2M385 716 aa10.47□□□□□ -0.73
HDAC6-233ENST00000489352 ZNF791Q3KP31 576 aaPredicted RBP10.47□□□□□ -0.73
HDAC6-233ENST00000489352 EIPR1Q53HC9 387 aa10.47□□□□□ -0.73
HDAC6-233ENST00000489352 PIGGQ5H8A4 983 aa10.47□□□□□ -0.73
HDAC6-233ENST00000489352 TBCELQ5QJ74 424 aa10.47□□□□□ -0.73
HDAC6-233ENST00000489352 DCST1Q5T197 706 aa10.47□□□□□ -0.73
HDAC6-233ENST00000489352 OR2A2Q6IF42 318 aa10.47□□□□□ -0.73
HDAC6-233ENST00000489352 ALKBH2Q6NS38 261 aa10.47□□□□□ -0.73
HDAC6-233ENST00000489352 ZNF474Q6S9Z5 364 aaPredicted RBP10.47□□□□□ -0.73
HDAC6-233ENST00000489352 ENPP6Q6UWR7 440 aa10.47□□□□□ -0.73
HDAC6-233ENST00000489352 MFSD7Q6UXD7 560 aa10.47□□□□□ -0.73
HDAC6-233ENST00000489352 TREML4Q6UXN2 200 aa10.47□□□□□ -0.73
HDAC6-233ENST00000489352 CLEC17AQ6ZS10 378 aa10.47□□□□□ -0.73
HDAC6-233ENST00000489352 CHMP1BQ7LBR1 199 aa10.47□□□□□ -0.73
HDAC6-233ENST00000489352 PACS2Q86VP3 889 aa10.47□□□□□ -0.73
HDAC6-233ENST00000489352 WFDC8Q8IUA0 241 aa10.47□□□□□ -0.73
HDAC6-233ENST00000489352 BANPQ8N9N5 519 aa10.47□□□□□ -0.73
HDAC6-233ENST00000489352 MFSD9Q8NBP5 474 aa10.47□□□□□ -0.73
HDAC6-233ENST00000489352 OR10H5Q8NGA6 315 aa10.47□□□□□ -0.73
HDAC6-233ENST00000489352 STARD4Q96DR4 205 aa10.47□□□□□ -0.73
HDAC6-233ENST00000489352 SPACA9Q96E40 222 aaPredicted RBP10.47□□□□□ -0.73
HDAC6-233ENST00000489352 ADAD1Q96M93 576 aaKnown RBP10.47□□□□□ -0.73
HDAC6-233ENST00000489352 PCBD2Q9H0N5 130 aa10.47□□□□□ -0.73
HDAC6-233ENST00000489352 MANSC1Q9H8J5 431 aa10.47□□□□□ -0.73
HDAC6-233ENST00000489352 CCDC177Q9NQR7 707 aaPredicted RBP10.47□□□□□ -0.73
HDAC6-233ENST00000489352 MRPS33Q9Y291 106 aaKnown RBP10.47□□□□□ -0.73
HDAC6-233ENST00000489352 A0A096LNT2 108 aa10.46□□□□□ -0.73
HDAC6-233ENST00000489352 A0A0A6YYJ9 748 aa10.46□□□□□ -0.73
HDAC6-233ENST00000489352 MROH6A6NGR9 719 aa10.46□□□□□ -0.73
HDAC6-233ENST00000489352 SLCO1B7G3V0H7 640 aa10.46□□□□□ -0.73
HDAC6-233ENST00000489352 OR1F1O43749 312 aa10.46□□□□□ -0.73
HDAC6-233ENST00000489352 ZNF354AO60765 605 aaPredicted RBP10.46□□□□□ -0.73
HDAC6-233ENST00000489352 ABCB7O75027 752 aa10.46□□□□□ -0.73
HDAC6-233ENST00000489352 PSIP1O75475 530 aaKnown RBP10.46□□□□□ -0.73
HDAC6-233ENST00000489352 CPN1P15169 458 aa10.46□□□□□ -0.73
HDAC6-233ENST00000489352 USF1P22415 310 aaPredicted RBP10.46□□□□□ -0.73
HDAC6-233ENST00000489352 SERPINB3P29508 390 aa10.46□□□□□ -0.73
HDAC6-233ENST00000489352 CCKARP32238 428 aa10.46□□□□□ -0.73
HDAC6-233ENST00000489352 HNF4AP41235 474 aa10.46□□□□□ -0.73
HDAC6-233ENST00000489352 HSD17B7P56937 341 aa10.46□□□□□ -0.73
HDAC6-233ENST00000489352 RAB8AP61006 207 aa10.46□□□□□ -0.73
HDAC6-233ENST00000489352 KBTBD12Q3ZCT8 623 aa10.46□□□□□ -0.73
HDAC6-233ENST00000489352 CCDC181Q5TID7 509 aa10.46□□□□□ -0.73
HDAC6-233ENST00000489352 ADGRD1Q6QNK2 874 aa10.46□□□□□ -0.73
HDAC6-233ENST00000489352 SEZ6L2Q6UXD5 910 aa10.46□□□□□ -0.73
HDAC6-233ENST00000489352 C22orf34Q6ZV56 151 aa10.46□□□□□ -0.73
HDAC6-233ENST00000489352 SLC15A4Q8N697 577 aa10.46□□□□□ -0.73
HDAC6-233ENST00000489352 OR14A16Q8NHC5 309 aa10.46□□□□□ -0.73
HDAC6-233ENST00000489352 FAM168AQ92567 244 aa10.46□□□□□ -0.73
HDAC6-233ENST00000489352 DIO2Q92813 273 aa10.46□□□□□ -0.73
HDAC6-233ENST00000489352 ZNF845Q96IR2 970 aaPredicted RBP10.46□□□□□ -0.73
HDAC6-233ENST00000489352 GNRHR2Q96P88 292 aa10.46□□□□□ -0.73
HDAC6-233ENST00000489352 C10orf88Q9H8K7 445 aa10.46□□□□□ -0.73
HDAC6-233ENST00000489352 PIH1D1Q9NWS0 290 aaKnown RBP10.46□□□□□ -0.73
HDAC6-233ENST00000489352 LIMA1Q9UHB6 759 aaKnown RBP10.46□□□□□ -0.73
HDAC6-233ENST00000489352 ELOA3DA6NLF2 546 aaPredicted RBP10.45□□□□□ -0.74
HDAC6-233ENST00000489352 FAM157AC9JC47 383 aa10.45□□□□□ -0.74
HDAC6-233ENST00000489352 TMPRSS2O15393 492 aa10.45□□□□□ -0.74
HDAC6-233ENST00000489352 NDUFS3O75489 264 aa10.45□□□□□ -0.74
HDAC6-233ENST00000489352 SERPINC1P01008 464 aa10.45□□□□□ -0.74
HDAC6-233ENST00000489352 DANCRP0C864 163 aa10.45□□□□□ -0.74
HDAC6-233ENST00000489352 MSH2P43246 934 aa10.45□□□□□ -0.74
HDAC6-233ENST00000489352 NAGLUP54802 743 aa10.45□□□□□ -0.74
HDAC6-233ENST00000489352 SIRPAP78324 504 aa10.45□□□□□ -0.74
HDAC6-233ENST00000489352 CCZ1BP86790 482 aa10.45□□□□□ -0.74
HDAC6-233ENST00000489352 CCZ1P86791 482 aaPredicted RBP10.45□□□□□ -0.74
HDAC6-233ENST00000489352 STX4Q12846 297 aa10.45□□□□□ -0.74
HDAC6-233ENST00000489352 EXOC3L2Q2M3D2 409 aa10.45□□□□□ -0.74
HDAC6-233ENST00000489352 KLHL38Q2WGJ6 581 aa10.45□□□□□ -0.74
HDAC6-233ENST00000489352 ELOA3BQ3SY89 546 aa10.45□□□□□ -0.74
HDAC6-233ENST00000489352 ADAM5Q6NVV9 412 aa10.45□□□□□ -0.74
HDAC6-233ENST00000489352 ALKBH5Q6P6C2 394 aaKnown RBP10.45□□□□□ -0.74
HDAC6-233ENST00000489352 VWA1Q6PCB0 445 aa10.45□□□□□ -0.74
HDAC6-233ENST00000489352 LRRC6Q86X45 466 aa10.45□□□□□ -0.74
HDAC6-233ENST00000489352 ELOA3Q8NG57 546 aa10.45□□□□□ -0.74
HDAC6-233ENST00000489352 OR10G3Q8NGC4 313 aa10.45□□□□□ -0.74
HDAC6-233ENST00000489352 ATL1Q8WXF7 558 aa10.45□□□□□ -0.74
HDAC6-233ENST00000489352 CTNNBL1Q8WYA6 563 aaPredicted RBP10.45□□□□□ -0.74
HDAC6-233ENST00000489352 ALKBH8Q96BT7 664 aaKnown RBP10.45□□□□□ -0.74
HDAC6-233ENST00000489352 FAR2Q96K12 515 aa10.45□□□□□ -0.74
HDAC6-233ENST00000489352 UCN2Q96RP3 112 aa10.45□□□□□ -0.74
HDAC6-233ENST00000489352 TACO1Q9BSH4 297 aaKnown RBP10.45□□□□□ -0.74
HDAC6-233ENST00000489352 TMEM204Q9BSN7 226 aa10.45□□□□□ -0.74
HDAC6-233ENST00000489352 LRRC40Q9H9A6 602 aa10.45□□□□□ -0.74
HDAC6-233ENST00000489352 PROK2Q9HC23 129 aa10.45□□□□□ -0.74
HDAC6-233ENST00000489352 CATSPERZQ9NTU4 200 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms