RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 DNAJC15Q9Y5T4 150 aa16.92■□□□□ 0.3
NPHP4-209ENST00000489180 FEZF1A0PJY2 475 aa16.91■□□□□ 0.3
NPHP4-209ENST00000489180 NFKBIEO00221 500 aa16.91■□□□□ 0.3
NPHP4-209ENST00000489180 SPARCP09486 303 aa16.91■□□□□ 0.3
NPHP4-209ENST00000489180 SH3BP2P78314 561 aa16.91■□□□□ 0.3
NPHP4-209ENST00000489180 KANK2Q63ZY3 851 aa16.91■□□□□ 0.3
NPHP4-209ENST00000489180 ZNF461Q8TAF7 563 aa16.91■□□□□ 0.3
NPHP4-209ENST00000489180 BBS10Q8TAM1 723 aa16.91■□□□□ 0.3
NPHP4-209ENST00000489180 RIT1Q92963 219 aa16.91■□□□□ 0.3
NPHP4-209ENST00000489180 ABCD2Q9UBJ2 740 aa16.91■□□□□ 0.3
NPHP4-209ENST00000489180 CCNOP22674 350 aa16.91■□□□□ 0.3
NPHP4-209ENST00000489180 TIA1P31483 386 aaKnown RBP eCLIP16.91■□□□□ 0.31e-5■■■□□ 19.1
NPHP4-209ENST00000489180 ACVR1BP36896 505 aa16.91■□□□□ 0.3
NPHP4-209ENST00000489180 ZXDBP98169 803 aa16.91■□□□□ 0.3
NPHP4-209ENST00000489180 TMEM135Q86UB9 458 aa16.91■□□□□ 0.3
NPHP4-209ENST00000489180 ZDHHC14Q8IZN3 488 aa16.91■□□□□ 0.3
NPHP4-209ENST00000489180 PNPLA1Q8N8W4 532 aa16.91■□□□□ 0.3
NPHP4-209ENST00000489180 ASCC1Q8N9N2 400 aaKnown RBP16.91■□□□□ 0.3
NPHP4-209ENST00000489180 PSD4Q8NDX1 1056 aa16.91■□□□□ 0.3
NPHP4-209ENST00000489180 MSLNLQ96KJ4 702 aa16.91■□□□□ 0.3
NPHP4-209ENST00000489180 MGLLQ99685 303 aa16.91■□□□□ 0.3
NPHP4-209ENST00000489180 OR8D2Q9GZM6 311 aa16.91■□□□□ 0.3
NPHP4-209ENST00000489180 MAB21L2Q9Y586 359 aa16.91■□□□□ 0.3
NPHP4-209ENST00000489180 A0A1W2PPL8 197 aa16.91■□□□□ 0.3
NPHP4-209ENST00000489180 SNNO75324 88 aaPredicted RBP16.91■□□□□ 0.3
NPHP4-209ENST00000489180 PABPC4LP0CB38 370 aaKnown RBP16.91■□□□□ 0.3
NPHP4-209ENST00000489180 VTCN1Q7Z7D3 282 aa16.91■□□□□ 0.3
NPHP4-209ENST00000489180 SYNPOQ8N3V7 929 aa16.91■□□□□ 0.3
NPHP4-209ENST00000489180 OR5T2Q8NGG2 359 aa16.91■□□□□ 0.3
NPHP4-209ENST00000489180 FNDC8Q8TC99 324 aa16.91■□□□□ 0.3
NPHP4-209ENST00000489180 A0A1B0GVI7 797 aa16.91■□□□□ 0.3
NPHP4-209ENST00000489180 C1GALT1C1LP0DN25 315 aa16.91■□□□□ 0.3
NPHP4-209ENST00000489180 CD40LGP29965 261 aa16.91■□□□□ 0.3
NPHP4-209ENST00000489180 HLCSP50747 726 aa16.91■□□□□ 0.3
NPHP4-209ENST00000489180 LMAN2Q12907 356 aa16.91■□□□□ 0.3
NPHP4-209ENST00000489180 ZNF776Q68DI1 518 aaPredicted RBP16.91■□□□□ 0.3
NPHP4-209ENST00000489180 TMEM107Q6UX40 140 aa16.91■□□□□ 0.3
NPHP4-209ENST00000489180 PXYLP1Q8TE99 480 aa16.91■□□□□ 0.3
NPHP4-209ENST00000489180 PAQR5Q9NXK6 330 aaPredicted RBP16.91■□□□□ 0.3
NPHP4-209ENST00000489180 UNC119BA6NIH7 251 aa16.9■□□□□ 0.3
NPHP4-209ENST00000489180 FBP2O00757 339 aa16.9■□□□□ 0.3
NPHP4-209ENST00000489180 SNAI1O95863 264 aaPredicted RBP16.9■□□□□ 0.3
NPHP4-209ENST00000489180 GTF2F2P13984 249 aa16.9■□□□□ 0.3
NPHP4-209ENST00000489180 ZNF16P17020 682 aaPredicted RBP16.9■□□□□ 0.3
NPHP4-209ENST00000489180 FDXRP22570 491 aa16.9■□□□□ 0.3
NPHP4-209ENST00000489180 GABRA3P34903 492 aa16.9■□□□□ 0.3
NPHP4-209ENST00000489180 HK3P52790 923 aa16.9■□□□□ 0.3
NPHP4-209ENST00000489180 NCS1P62166 190 aa16.9■□□□□ 0.3
NPHP4-209ENST00000489180 POU6F2P78424 691 aaPredicted RBP16.9■□□□□ 0.3
NPHP4-209ENST00000489180 GAS6Q14393 721 aa16.9■□□□□ 0.3
NPHP4-209ENST00000489180 NPWQ8N729 165 aa16.9■□□□□ 0.3
NPHP4-209ENST00000489180 OR5P2Q8WZ92 322 aa16.9■□□□□ 0.3
NPHP4-209ENST00000489180 MSANTD3Q96H12 275 aa16.9■□□□□ 0.3
NPHP4-209ENST00000489180 GTPBP2Q9BX10 602 aaKnown RBP16.9■□□□□ 0.3
NPHP4-209ENST00000489180 PCDHGB5Q9Y5G0 923 aa16.9■□□□□ 0.3
NPHP4-209ENST00000489180 IVDP26440 423 aa16.9■□□□□ 0.3
NPHP4-209ENST00000489180 GRIA2P42262 883 aa16.9■□□□□ 0.3
NPHP4-209ENST00000489180 CRISP1P54107 249 aa16.9■□□□□ 0.3
NPHP4-209ENST00000489180 ZNF252P-AS1Q0IIN9 211 aa16.9■□□□□ 0.3
NPHP4-209ENST00000489180 PON2Q15165 354 aa16.9■□□□□ 0.3
NPHP4-209ENST00000489180 CES4AQ5XG92 561 aa16.9■□□□□ 0.3
NPHP4-209ENST00000489180 TIGD4Q8IY51 512 aa16.9■□□□□ 0.3
NPHP4-209ENST00000489180 OR4K14Q8NGD5 310 aa16.9■□□□□ 0.3
NPHP4-209ENST00000489180 CD300LFQ8TDQ1 290 aa16.9■□□□□ 0.3
NPHP4-209ENST00000489180 PAAF1Q9BRP4 392 aa16.9■□□□□ 0.3
NPHP4-209ENST00000489180 METTL7AQ9H8H3 244 aa16.9■□□□□ 0.3
NPHP4-209ENST00000489180 ABCC6O95255 1503 aa16.9■□□□□ 0.3
NPHP4-209ENST00000489180 CLCA1A8K7I4 914 aa16.9■□□□□ 0.3
NPHP4-209ENST00000489180 SLC1A7O00341 560 aa16.9■□□□□ 0.3
NPHP4-209ENST00000489180 RP2O75695 350 aa16.9■□□□□ 0.3
NPHP4-209ENST00000489180 MAGEA11P43364 429 aa16.9■□□□□ 0.3
NPHP4-209ENST00000489180 MAP2K3P46734 347 aa16.9■□□□□ 0.3
NPHP4-209ENST00000489180 NNATQ16517 81 aa16.9■□□□□ 0.3
NPHP4-209ENST00000489180 STEAP4Q687X5 459 aa16.9■□□□□ 0.3
NPHP4-209ENST00000489180 KLBQ86Z14 1044 aa16.9■□□□□ 0.3
NPHP4-209ENST00000489180 GID4Q8IVV7 300 aa16.9■□□□□ 0.3
NPHP4-209ENST00000489180 CLECL1Q8IZS7 167 aa16.9■□□□□ 0.3
NPHP4-209ENST00000489180 LMX1AQ8TE12 382 aa16.9■□□□□ 0.3
NPHP4-209ENST00000489180 NELL2Q99435 816 aa16.9■□□□□ 0.3
NPHP4-209ENST00000489180 PLD2O14939 933 aa16.9■□□□□ 0.3
NPHP4-209ENST00000489180 AHSA1O95433 338 aa16.9■□□□□ 0.3
NPHP4-209ENST00000489180 WNT7BP56706 349 aa16.9■□□□□ 0.3
NPHP4-209ENST00000489180 PHF19Q5T6S3 580 aa16.9■□□□□ 0.3
NPHP4-209ENST00000489180 ASRGL1Q7L266 308 aa16.9■□□□□ 0.3
NPHP4-209ENST00000489180 NUP43Q8NFH3 380 aa16.9■□□□□ 0.3
NPHP4-209ENST00000489180 OR2T33Q8NG76 320 aa16.9■□□□□ 0.3
NPHP4-209ENST00000489180 OR6N1Q8NGY5 312 aa16.9■□□□□ 0.3
NPHP4-209ENST00000489180 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.9■□□□□ 0.3
NPHP4-209ENST00000489180 HCAR2Q8TDS4 363 aa16.9■□□□□ 0.3
NPHP4-209ENST00000489180 SGIP1Q9BQI5 828 aa16.9■□□□□ 0.3
NPHP4-209ENST00000489180 SCP2D1Q9UJQ7 156 aa16.9■□□□□ 0.3
NPHP4-209ENST00000489180 TMEM5Q9Y2B1 443 aa16.9■□□□□ 0.3
NPHP4-209ENST00000489180 PROZP22891 400 aa16.89■□□□□ 0.3
NPHP4-209ENST00000489180 CCBE1Q6UXH8 406 aaPredicted RBP16.89■□□□□ 0.3
NPHP4-209ENST00000489180 ZNF565Q8N9K5 539 aa16.89■□□□□ 0.3
NPHP4-209ENST00000489180 OR10T2Q8NGX3 314 aa16.89■□□□□ 0.3
NPHP4-209ENST00000489180 CREB3L1Q96BA8 519 aa16.89■□□□□ 0.3
NPHP4-209ENST00000489180 F2RL3Q96RI0 385 aa16.89■□□□□ 0.3
NPHP4-209ENST00000489180 TMEM246Q9BRR3 403 aa16.89■□□□□ 0.3
NPHP4-209ENST00000489180 SEZ6LQ9BYH1 1024 aa16.89■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms