RNA–Protein interactions for RNA: ENST00000489160.1

CCL20-204, Transcript of C-C motif chemokine ligand 20, humanhuman

TSL 3

Gene CCL20, Length 673 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20-204ENST00000489160 SFTPBP07988 381 aa4.34□□□□□ -1.71
CCL20-204ENST00000489160 RPL35AP18077 110 aaKnown RBP4.34□□□□□ -1.71
CCL20-204ENST00000489160 MT3P25713 68 aa4.34□□□□□ -1.71
CCL20-204ENST00000489160 ELAVL4P26378 380 aaKnown RBP4.34□□□□□ -1.71
CCL20-204ENST00000489160 PRDX6P30041 224 aa4.34□□□□□ -1.71
CCL20-204ENST00000489160 OR3A1P47881 315 aa4.34□□□□□ -1.71
CCL20-204ENST00000489160 LEPRP48357 1165 aaKnown RBP4.34□□□□□ -1.71
CCL20-204ENST00000489160 NUMBP49757 651 aa4.34□□□□□ -1.71
CCL20-204ENST00000489160 KCNK10P57789 538 aa4.34□□□□□ -1.71
CCL20-204ENST00000489160 SNRPD1P62314 119 aaKnown RBP4.34□□□□□ -1.71
CCL20-204ENST00000489160 CHIT1Q13231 466 aa4.34□□□□□ -1.71
CCL20-204ENST00000489160 NADK2Q4G0N4 442 aa4.34□□□□□ -1.71
CCL20-204ENST00000489160 FGD3Q5JSP0 725 aa4.34□□□□□ -1.71
CCL20-204ENST00000489160 SULT1C3Q6IMI6 304 aa4.34□□□□□ -1.71
CCL20-204ENST00000489160 CD164L2Q6UWJ8 174 aa4.34□□□□□ -1.71
CCL20-204ENST00000489160 HOGA1Q86XE5 327 aa4.34□□□□□ -1.71
CCL20-204ENST00000489160 STHQ8IWL8 128 aa4.34□□□□□ -1.71
CCL20-204ENST00000489160 CENPLQ8N0S6 344 aaPredicted RBP4.34□□□□□ -1.71
CCL20-204ENST00000489160 DCLK2Q8N568 766 aa4.34□□□□□ -1.71
CCL20-204ENST00000489160 SMYD1Q8NB12 490 aa4.34□□□□□ -1.71
CCL20-204ENST00000489160 FAM71CQ8NEG0 241 aa4.34□□□□□ -1.71
CCL20-204ENST00000489160 OR52K2Q8NGK3 314 aa4.34□□□□□ -1.71
CCL20-204ENST00000489160 AZIN2Q96A70 460 aa4.34□□□□□ -1.71
CCL20-204ENST00000489160 C16orf58Q96GQ5 468 aa4.34□□□□□ -1.71
CCL20-204ENST00000489160 CFAP53Q96M91 514 aa4.34□□□□□ -1.71
CCL20-204ENST00000489160 NECTIN4Q96NY8 510 aa4.34□□□□□ -1.71
CCL20-204ENST00000489160 CCT7Q99832 543 aa4.34□□□□□ -1.71
CCL20-204ENST00000489160 ALKBH7Q9BT30 221 aaPredicted RBP4.34□□□□□ -1.71
CCL20-204ENST00000489160 FICDQ9BVA6 458 aa4.34□□□□□ -1.71
CCL20-204ENST00000489160 FTHL17Q9BXU8 183 aa4.34□□□□□ -1.71
CCL20-204ENST00000489160 BARHL1Q9BZE3 327 aa4.34□□□□□ -1.71
CCL20-204ENST00000489160 EGLN3Q9H6Z9 239 aa4.34□□□□□ -1.71
CCL20-204ENST00000489160 RMND5AQ9H871 391 aa4.34□□□□□ -1.71
CCL20-204ENST00000489160 ROPN1Q9HAT0 212 aaPredicted RBP4.34□□□□□ -1.71
CCL20-204ENST00000489160 EXOC1Q9NV70 894 aa4.34□□□□□ -1.71
CCL20-204ENST00000489160 TBC1D13Q9NVG8 400 aa4.34□□□□□ -1.71
CCL20-204ENST00000489160 FBXL4Q9UKA2 621 aa4.34□□□□□ -1.71
CCL20-204ENST00000489160 NCAPD2Q15021 1401 aa4.34□□□□□ -1.71
CCL20-204ENST00000489160 KDRP35968 1356 aa4.33□□□□□ -1.72
CCL20-204ENST00000489160 CTAGE15A4D2H0 777 aa4.33□□□□□ -1.72
CCL20-204ENST00000489160 MTMR11A4FU01 709 aa4.33□□□□□ -1.72
CCL20-204ENST00000489160 EEF2KO00418 725 aaKnown RBP4.33□□□□□ -1.72
CCL20-204ENST00000489160 TLX2O43763 284 aaPredicted RBP4.33□□□□□ -1.72
CCL20-204ENST00000489160 IGLV1-44P01699 117 aa4.33□□□□□ -1.72
CCL20-204ENST00000489160 KRT8P05787 483 aa4.33□□□□□ -1.72
CCL20-204ENST00000489160 GSTA2P09210 222 aa4.33□□□□□ -1.72
CCL20-204ENST00000489160 DLATP10515 647 aaKnown RBP4.33□□□□□ -1.72
CCL20-204ENST00000489160 KRT3P12035 628 aa4.33□□□□□ -1.72
CCL20-204ENST00000489160 RBMS1P29558 406 aaKnown RBP4.33□□□□□ -1.72
CCL20-204ENST00000489160 GDI1P31150 447 aa4.33□□□□□ -1.72
CCL20-204ENST00000489160 OR3A3P47888 321 aa4.33□□□□□ -1.72
CCL20-204ENST00000489160 PAX9P55771 341 aa4.33□□□□□ -1.72
CCL20-204ENST00000489160 DCDC1P59894 354 aa4.33□□□□□ -1.72
CCL20-204ENST00000489160 HYAL1Q12794 435 aa4.33□□□□□ -1.72
CCL20-204ENST00000489160 SRSF9Q13242 221 aaKnown RBP eCLIP4.33□□□□□ -1.72
CCL20-204ENST00000489160 SNTB2Q13425 540 aaKnown RBP4.33□□□□□ -1.72
CCL20-204ENST00000489160 GPM6BQ13491 265 aa4.33□□□□□ -1.72
CCL20-204ENST00000489160 GK2Q14410 553 aaPredicted RBP4.33□□□□□ -1.72
CCL20-204ENST00000489160 EFTUD2Q15029 972 aaKnown RBP eCLIP4.33□□□□□ -1.724e-24■□□□□ 10.7
CCL20-204ENST00000489160 ZMYND11Q15326 602 aa4.33□□□□□ -1.72
CCL20-204ENST00000489160 SLC36A3Q495N2 470 aa4.33□□□□□ -1.72
CCL20-204ENST00000489160 FILIP1LQ4L180 1135 aa4.33□□□□□ -1.72
CCL20-204ENST00000489160 ARMCX4Q5H9R4 360 aa4.33□□□□□ -1.72
CCL20-204ENST00000489160 ADAMTSL4-AS1Q5T5F5 129 aa4.33□□□□□ -1.72
CCL20-204ENST00000489160 ZNF770Q6IQ21 691 aaPredicted RBP4.33□□□□□ -1.72
CCL20-204ENST00000489160 KLHL10Q6JEL2 608 aa4.33□□□□□ -1.72
CCL20-204ENST00000489160 PWWP2BQ6NUJ5 590 aa4.33□□□□□ -1.72
CCL20-204ENST00000489160 FIP1L1Q6UN15 594 aaKnown RBP4.33□□□□□ -1.72
CCL20-204ENST00000489160 Q6ZSR9 355 aa4.33□□□□□ -1.72
CCL20-204ENST00000489160 Q6ZTC4 211 aa4.33□□□□□ -1.72
CCL20-204ENST00000489160 NOTCH2NLQ7Z3S9 236 aa4.33□□□□□ -1.72
CCL20-204ENST00000489160 CTAGE6Q86UF2 777 aa4.33□□□□□ -1.72
CCL20-204ENST00000489160 ZNF444Q8N0Y2 327 aaPredicted RBP4.33□□□□□ -1.72
CCL20-204ENST00000489160 SIDT2Q8NBJ9 832 aaKnown RBP4.33□□□□□ -1.72
CCL20-204ENST00000489160 OR52B4Q8NGK2 314 aa4.33□□□□□ -1.72
CCL20-204ENST00000489160 OR52M1Q8NGK5 317 aa4.33□□□□□ -1.72
CCL20-204ENST00000489160 SMAP2Q8WU79 429 aaPredicted RBP4.33□□□□□ -1.72
CCL20-204ENST00000489160 RPGRIP1Q96KN7 1286 aa4.33□□□□□ -1.72
CCL20-204ENST00000489160 KRTAP2-2Q9BYT5 123 aa4.33□□□□□ -1.72
CCL20-204ENST00000489160 NMNAT2Q9BZQ4 307 aa4.33□□□□□ -1.72
CCL20-204ENST00000489160 POLR1EQ9GZS1 481 aaKnown RBP4.33□□□□□ -1.72
CCL20-204ENST00000489160 RAB33BQ9H082 229 aa4.33□□□□□ -1.72
CCL20-204ENST00000489160 DCLRE1BQ9H816 532 aa4.33□□□□□ -1.72
CCL20-204ENST00000489160 GORASP2Q9H8Y8 452 aa4.33□□□□□ -1.72
CCL20-204ENST00000489160 FGF22Q9HCT0 170 aa4.33□□□□□ -1.72
CCL20-204ENST00000489160 TXLNGQ9NUQ3 528 aa4.33□□□□□ -1.72
CCL20-204ENST00000489160 PANK4Q9NVE7 773 aa4.33□□□□□ -1.72
CCL20-204ENST00000489160 NMRK1Q9NWW6 199 aa4.33□□□□□ -1.72
CCL20-204ENST00000489160 PILRBQ9UKJ0 227 aa4.33□□□□□ -1.72
CCL20-204ENST00000489160 NCKAP1Q9Y2A7 1128 aa4.33□□□□□ -1.72
CCL20-204ENST00000489160 PYGO1Q9Y3Y4 419 aa4.33□□□□□ -1.72
CCL20-204ENST00000489160 MFHAS1Q9Y4C4 1052 aa4.33□□□□□ -1.72
CCL20-204ENST00000489160 SELENOKQ9Y6D0 94 aa4.33□□□□□ -1.72
CCL20-204ENST00000489160 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.33□□□□□ -1.72
CCL20-204ENST00000489160 CUX2O14529 1486 aa4.32□□□□□ -1.72
CCL20-204ENST00000489160 TRBV4-1A0A0J9YWV2 114 aa4.32□□□□□ -1.72
CCL20-204ENST00000489160 ANKDD1BA6NHY2 528 aa4.32□□□□□ -1.72
CCL20-204ENST00000489160 E5RGE8 158 aa4.32□□□□□ -1.72
CCL20-204ENST00000489160 H0YC42 278 aa4.32□□□□□ -1.72
CCL20-204ENST00000489160 H3BMM5 538 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms