RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 ATP9AO75110 1047 aa3.15□□□□□ -1.91
SSR1-209ENST00000488834 GH1P01241 217 aa3.15□□□□□ -1.91
SSR1-209ENST00000488834 SKILP12757 684 aa3.15□□□□□ -1.91
SSR1-209ENST00000488834 CPA3P15088 417 aa3.15□□□□□ -1.91
SSR1-209ENST00000488834 KIF5BP33176 963 aa3.15□□□□□ -1.91
SSR1-209ENST00000488834 SPRP35270 261 aaPredicted RBP3.15□□□□□ -1.91
SSR1-209ENST00000488834 ANP32AP39687 249 aaKnown RBP3.15□□□□□ -1.91
SSR1-209ENST00000488834 SLC1A6P48664 564 aa3.15□□□□□ -1.91
SSR1-209ENST00000488834 SNU13P55769 128 aaKnown RBP3.15□□□□□ -1.91
SSR1-209ENST00000488834 RPS27AP62979 156 aaKnown RBP3.15□□□□□ -1.91
SSR1-209ENST00000488834 IRX3P78415 501 aaPredicted RBP3.15□□□□□ -1.91
SSR1-209ENST00000488834 GPR50Q13585 617 aa3.15□□□□□ -1.91
SSR1-209ENST00000488834 RCN2Q14257 317 aa3.15□□□□□ -1.91
SSR1-209ENST00000488834 SLMAPQ14BN4 828 aa3.15□□□□□ -1.91
SSR1-209ENST00000488834 MEP1BQ16820 701 aa3.15□□□□□ -1.91
SSR1-209ENST00000488834 PLPP4Q5VZY2 271 aa3.15□□□□□ -1.91
SSR1-209ENST00000488834 PODNL1Q6PEZ8 512 aa3.15□□□□□ -1.91
SSR1-209ENST00000488834 REG3GQ6UW15 175 aa3.15□□□□□ -1.91
SSR1-209ENST00000488834 SIGLEC15Q6ZMC9 328 aa3.15□□□□□ -1.91
SSR1-209ENST00000488834 ZNF730Q6ZMV8 503 aa3.15□□□□□ -1.91
SSR1-209ENST00000488834 LINC00696Q6ZRV3 163 aa3.15□□□□□ -1.91
SSR1-209ENST00000488834 ADCK1Q86TW2 530 aa3.15□□□□□ -1.91
SSR1-209ENST00000488834 RPAINQ86UA6 219 aa3.15□□□□□ -1.91
SSR1-209ENST00000488834 AQP12AQ8IXF9 295 aa3.15□□□□□ -1.91
SSR1-209ENST00000488834 CCDC170Q8IYT3 715 aa3.15□□□□□ -1.91
SSR1-209ENST00000488834 NUP93Q8N1F7 819 aa3.15□□□□□ -1.91
SSR1-209ENST00000488834 LINC00612Q8N6U2 182 aa3.15□□□□□ -1.91
SSR1-209ENST00000488834 OR7G3Q8NG95 312 aa3.15□□□□□ -1.91
SSR1-209ENST00000488834 OR8H1Q8NGG4 311 aa3.15□□□□□ -1.91
SSR1-209ENST00000488834 OR1B1Q8NGR6 318 aa3.15□□□□□ -1.91
SSR1-209ENST00000488834 KIAA1524Q8TCG1 905 aa3.15□□□□□ -1.91
SSR1-209ENST00000488834 ZPLD1Q8TCW7 415 aa3.15□□□□□ -1.91
SSR1-209ENST00000488834 CD99L2Q8TCZ2 262 aa3.15□□□□□ -1.91
SSR1-209ENST00000488834 GPR148Q8TDV2 347 aa3.15□□□□□ -1.91
SSR1-209ENST00000488834 GANCQ8TET4 914 aa3.15□□□□□ -1.91
SSR1-209ENST00000488834 NABP1Q96AH0 204 aa3.15□□□□□ -1.91
SSR1-209ENST00000488834 CCM2Q9BSQ5 444 aa3.15□□□□□ -1.91
SSR1-209ENST00000488834 CCDC28BQ9BUN5 200 aa3.15□□□□□ -1.91
SSR1-209ENST00000488834 LRRC2Q9BYS8 371 aa3.15□□□□□ -1.91
SSR1-209ENST00000488834 ABCG4Q9H172 646 aa3.15□□□□□ -1.91
SSR1-209ENST00000488834 MARCH7Q9H992 704 aa3.15□□□□□ -1.91
SSR1-209ENST00000488834 CPQQ9Y646 472 aa3.15□□□□□ -1.91
SSR1-209ENST00000488834 ACEP12821 1306 aa3.15□□□□□ -1.91
SSR1-209ENST00000488834 MAGEB16A2A368 324 aa3.14□□□□□ -1.91
SSR1-209ENST00000488834 RPL37AP8A6NKH3 93 aa3.14□□□□□ -1.91
SSR1-209ENST00000488834 NEDD8-MDP1E9PL57 170 aa3.14□□□□□ -1.91
SSR1-209ENST00000488834 K7EQG2 157 aa3.14□□□□□ -1.91
SSR1-209ENST00000488834 P2RX6O15547 441 aa3.14□□□□□ -1.91
SSR1-209ENST00000488834 SLC7A4O43246 635 aa3.14□□□□□ -1.91
SSR1-209ENST00000488834 HTATSF1O43719 755 aaKnown RBP3.14□□□□□ -1.91
SSR1-209ENST00000488834 IGKV3-15P01624 115 aa3.14□□□□□ -1.91
SSR1-209ENST00000488834 MATKP42679 507 aa3.14□□□□□ -1.91
SSR1-209ENST00000488834 GSTO1P78417 241 aa3.14□□□□□ -1.91
SSR1-209ENST00000488834 SLC34A1Q06495 639 aa3.14□□□□□ -1.91
SSR1-209ENST00000488834 ITPK1Q13572 414 aa3.14□□□□□ -1.91
SSR1-209ENST00000488834 SMU1Q2TAY7 513 aa3.14□□□□□ -1.91
SSR1-209ENST00000488834 TTC31Q49AM3 519 aaPredicted RBP3.14□□□□□ -1.91
SSR1-209ENST00000488834 TAF3Q5VWG9 929 aa3.14□□□□□ -1.91
SSR1-209ENST00000488834 LEMD1Q68G75 181 aa3.14□□□□□ -1.91
SSR1-209ENST00000488834 CATSPER4Q7RTX7 472 aa3.14□□□□□ -1.91
SSR1-209ENST00000488834 SH2D6Q7Z4S9 175 aa3.14□□□□□ -1.91
SSR1-209ENST00000488834 LRRC49Q8IUZ0 686 aa3.14□□□□□ -1.91
SSR1-209ENST00000488834 GPD1LQ8N335 351 aa3.14□□□□□ -1.91
SSR1-209ENST00000488834 RTL3Q8N8U3 475 aaKnown RBP3.14□□□□□ -1.91
SSR1-209ENST00000488834 NAT8LQ8N9F0 302 aa3.14□□□□□ -1.91
SSR1-209ENST00000488834 CSNK1G2-AS1Q8NCQ2 148 aa3.14□□□□□ -1.91
SSR1-209ENST00000488834 C8orf46Q8TAG6 207 aa3.14□□□□□ -1.91
SSR1-209ENST00000488834 ULK4Q96C45 1275 aa3.14□□□□□ -1.91
SSR1-209ENST00000488834 RUNDC3BQ96NL0 473 aa3.14□□□□□ -1.91
SSR1-209ENST00000488834 RCHY1Q96PM5 261 aa3.14□□□□□ -1.91
SSR1-209ENST00000488834 ZNF559Q9BR84 538 aa3.14□□□□□ -1.91
SSR1-209ENST00000488834 FUT8Q9BYC5 575 aa3.14□□□□□ -1.91
SSR1-209ENST00000488834 LIME1Q9H400 295 aa3.14□□□□□ -1.91
SSR1-209ENST00000488834 ZNF665Q9H7R5 613 aa3.14□□□□□ -1.91
SSR1-209ENST00000488834 DNAJC17Q9NVM6 304 aaKnown RBP3.14□□□□□ -1.91
SSR1-209ENST00000488834 UBQLN2Q9UHD9 624 aa3.14□□□□□ -1.91
SSR1-209ENST00000488834 TSPAN16Q9UKR8 245 aa3.14□□□□□ -1.91
SSR1-209ENST00000488834 ZNF346Q9UL40 294 aaKnown RBP3.14□□□□□ -1.91
SSR1-209ENST00000488834 NIP7Q9Y221 180 aaKnown RBP eCLIP3.14□□□□□ -1.91
SSR1-209ENST00000488834 TEX48A0A1B0GUV7 120 aa3.13□□□□□ -1.91
SSR1-209ENST00000488834 C13orf42A0A1B0GVH6 325 aa3.13□□□□□ -1.91
SSR1-209ENST00000488834 BCLAF3A2AJT9 711 aaKnown RBP3.13□□□□□ -1.91
SSR1-209ENST00000488834 FAM149AA5PLN7 773 aa3.13□□□□□ -1.91
SSR1-209ENST00000488834 OR5H15A6NDH6 313 aa3.13□□□□□ -1.91
SSR1-209ENST00000488834 TRIM64CA6NLI5 447 aa3.13□□□□□ -1.91
SSR1-209ENST00000488834 CPLX1O14810 134 aa3.13□□□□□ -1.91
SSR1-209ENST00000488834 TPM2P07951 284 aa3.13□□□□□ -1.91
SSR1-209ENST00000488834 GJB2P29033 226 aa3.13□□□□□ -1.91
SSR1-209ENST00000488834 HPDP32754 393 aaPredicted RBP3.13□□□□□ -1.91
SSR1-209ENST00000488834 ID1P41134 155 aa3.13□□□□□ -1.91
SSR1-209ENST00000488834 FRKP42685 505 aaPredicted RBP3.13□□□□□ -1.91
SSR1-209ENST00000488834 RPL34P49207 117 aaKnown RBP3.13□□□□□ -1.91
SSR1-209ENST00000488834 GSK3BP49841 420 aa3.13□□□□□ -1.91
SSR1-209ENST00000488834 STX1BP61266 288 aa3.13□□□□□ -1.91
SSR1-209ENST00000488834 TYSND1Q2T9J0 566 aa3.13□□□□□ -1.91
SSR1-209ENST00000488834 POM121L1PQ3SYA9 428 aa3.13□□□□□ -1.91
SSR1-209ENST00000488834 KBTBD12Q3ZCT8 623 aa3.13□□□□□ -1.91
SSR1-209ENST00000488834 AGAP6Q5VW22 663 aa3.13□□□□□ -1.91
SSR1-209ENST00000488834 SNRNP48Q6IEG0 339 aaKnown RBP3.13□□□□□ -1.91
SSR1-209ENST00000488834 NEPROQ6NW34 567 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms