RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 KRTAP13-3Q3SY46 172 aa2.66□□□□□ -1.98
CD46-215ENST00000488596 EPC2Q52LR7 807 aa2.66□□□□□ -1.98
CD46-215ENST00000488596 ZNF730Q6ZMV8 503 aa2.66□□□□□ -1.98
CD46-215ENST00000488596 MCM10Q7L590 875 aa2.66□□□□□ -1.98
CD46-215ENST00000488596 SH2D6Q7Z4S9 175 aa2.66□□□□□ -1.98
CD46-215ENST00000488596 GTSCR1Q86UQ5 136 aa2.66□□□□□ -1.98
CD46-215ENST00000488596 FAM131BQ86XD5 332 aa2.66□□□□□ -1.98
CD46-215ENST00000488596 TBC1D10CQ8IV04 446 aa2.66□□□□□ -1.98
CD46-215ENST00000488596 RELL2Q8NC24 303 aaPredicted RBP2.66□□□□□ -1.98
CD46-215ENST00000488596 NEK11Q8NG66 645 aa2.66□□□□□ -1.98
CD46-215ENST00000488596 OR4A16Q8NH70 328 aa2.66□□□□□ -1.98
CD46-215ENST00000488596 C8orf46Q8TAG6 207 aa2.66□□□□□ -1.98
CD46-215ENST00000488596 SPPL2AQ8TCT8 520 aa2.66□□□□□ -1.98
CD46-215ENST00000488596 MRPL53Q96EL3 112 aaKnown RBP2.66□□□□□ -1.98
CD46-215ENST00000488596 CFAP36Q96G28 342 aa2.66□□□□□ -1.98
CD46-215ENST00000488596 SLC45A3Q96JT2 553 aa2.66□□□□□ -1.98
CD46-215ENST00000488596 ZNF560Q96MR9 790 aa2.66□□□□□ -1.98
CD46-215ENST00000488596 ATOH8Q96SQ7 321 aa2.66□□□□□ -1.98
CD46-215ENST00000488596 AGPAT1Q99943 283 aa2.66□□□□□ -1.98
CD46-215ENST00000488596 TRIM51Q9BSJ1 452 aa2.66□□□□□ -1.98
CD46-215ENST00000488596 PINK1Q9BXM7 581 aa2.66□□□□□ -1.98
CD46-215ENST00000488596 DPEP3Q9H4B8 488 aa2.66□□□□□ -1.98
CD46-215ENST00000488596 DDX28Q9NUL7 540 aaKnown RBP2.66□□□□□ -1.98
CD46-215ENST00000488596 NDUFA13Q9P0J0 144 aa2.66□□□□□ -1.98
CD46-215ENST00000488596 AKAP7Q9P0M2 348 aaPredicted RBP2.66□□□□□ -1.98
CD46-215ENST00000488596 PAK5Q9P286 719 aa2.66□□□□□ -1.98
CD46-215ENST00000488596 NIP7Q9Y221 180 aaKnown RBP eCLIP2.66□□□□□ -1.98
CD46-215ENST00000488596 FOXA2Q9Y261 457 aaPredicted RBP2.66□□□□□ -1.98
CD46-215ENST00000488596 CACNA1FO60840 1977 aa2.66□□□□□ -1.98
CD46-215ENST00000488596 KIF7Q2M1P5 1343 aa2.66□□□□□ -1.98
CD46-215ENST00000488596 FGD5Q6ZNL6 1462 aa2.65□□□□□ -1.98
CD46-215ENST00000488596 DHX29Q7Z478 1369 aaKnown RBP2.65□□□□□ -1.98
CD46-215ENST00000488596 TRBV5-4A0A0C4DH59 114 aa2.65□□□□□ -1.99
CD46-215ENST00000488596 A0A0U1RQG5 324 aaPredicted RBP2.65□□□□□ -1.99
CD46-215ENST00000488596 NEDD8-MDP1E9PL57 170 aa2.65□□□□□ -1.99
CD46-215ENST00000488596 DDX39AO00148 427 aaKnown RBP2.65□□□□□ -1.99
CD46-215ENST00000488596 TLR4O00206 839 aa2.65□□□□□ -1.99
CD46-215ENST00000488596 OGTO15294 1046 aa2.65□□□□□ -1.99
CD46-215ENST00000488596 OR6A2O95222 327 aa2.65□□□□□ -1.99
CD46-215ENST00000488596 OLFM2O95897 454 aa2.65□□□□□ -1.99
CD46-215ENST00000488596 PNPP00491 289 aa2.65□□□□□ -1.99
CD46-215ENST00000488596 ADORA3P0DMS8 318 aa2.65□□□□□ -1.99
CD46-215ENST00000488596 VDRP11473 427 aa2.65□□□□□ -1.99
CD46-215ENST00000488596 ANPEPP15144 967 aa2.65□□□□□ -1.99
CD46-215ENST00000488596 FERP16591 822 aa2.65□□□□□ -1.99
CD46-215ENST00000488596 HLA-DPA1P20036 260 aa2.65□□□□□ -1.99
CD46-215ENST00000488596 CYP3A5P20815 502 aa2.65□□□□□ -1.99
CD46-215ENST00000488596 GLRA1P23415 457 aa2.65□□□□□ -1.99
CD46-215ENST00000488596 STIP1P31948 543 aaKnown RBP2.65□□□□□ -1.99
CD46-215ENST00000488596 RPL9P32969 192 aaKnown RBP2.65□□□□□ -1.99
CD46-215ENST00000488596 CAPGP40121 348 aa2.65□□□□□ -1.99
CD46-215ENST00000488596 ATP4BP51164 291 aa2.65□□□□□ -1.99
CD46-215ENST00000488596 CCR4P51679 360 aa2.65□□□□□ -1.99
CD46-215ENST00000488596 KCNK10P57789 538 aa2.65□□□□□ -1.99
CD46-215ENST00000488596 DSCR10P59022 87 aa2.65□□□□□ -1.99
CD46-215ENST00000488596 HERV-K104P63124 156 aa2.65□□□□□ -1.99
CD46-215ENST00000488596 PAX8Q06710 450 aa2.65□□□□□ -1.99
CD46-215ENST00000488596 KRT31Q15323 416 aa2.65□□□□□ -1.99
CD46-215ENST00000488596 UPP1Q16831 310 aa2.65□□□□□ -1.99
CD46-215ENST00000488596 RFTN2Q52LD8 501 aaPredicted RBP2.65□□□□□ -1.99
CD46-215ENST00000488596 FAAP20Q6NZ36 180 aa2.65□□□□□ -1.99
CD46-215ENST00000488596 PAQR6Q6TCH4 344 aa2.65□□□□□ -1.99
CD46-215ENST00000488596 CD164L2Q6UWJ8 174 aa2.65□□□□□ -1.99
CD46-215ENST00000488596 GPRIN3Q6ZVF9 776 aa2.65□□□□□ -1.99
CD46-215ENST00000488596 STXBP4Q6ZWJ1 553 aa2.65□□□□□ -1.99
CD46-215ENST00000488596 ZNF410Q86VK4 478 aa2.65□□□□□ -1.99
CD46-215ENST00000488596 PEX5LQ8IYB4 626 aa2.65□□□□□ -1.99
CD46-215ENST00000488596 SPAG16Q8N0X2 631 aa2.65□□□□□ -1.99
CD46-215ENST00000488596 ABHD12Q8N2K0 398 aa2.65□□□□□ -1.99
CD46-215ENST00000488596 SIDT2Q8NBJ9 832 aaKnown RBP2.65□□□□□ -1.99
CD46-215ENST00000488596 PSMA8Q8TAA3 256 aa2.65□□□□□ -1.99
CD46-215ENST00000488596 LRRC15Q8TF66 581 aa2.65□□□□□ -1.99
CD46-215ENST00000488596 ATP6V0A1Q93050 837 aa2.65□□□□□ -1.99
CD46-215ENST00000488596 MRPL24Q96A35 216 aaKnown RBP2.65□□□□□ -1.99
CD46-215ENST00000488596 NABP1Q96AH0 204 aa2.65□□□□□ -1.99
CD46-215ENST00000488596 GAL3ST4Q96RP7 486 aa2.65□□□□□ -1.99
CD46-215ENST00000488596 ZNF577Q9BSK1 485 aa2.65□□□□□ -1.99
CD46-215ENST00000488596 NUSAP1Q9BXS6 441 aaKnown RBP2.65□□□□□ -1.99
CD46-215ENST00000488596 TRIM7Q9C029 511 aa2.65□□□□□ -1.99
CD46-215ENST00000488596 WWP1Q9H0M0 922 aa2.65□□□□□ -1.99
CD46-215ENST00000488596 TSPYL1Q9H0U9 437 aa2.65□□□□□ -1.99
CD46-215ENST00000488596 ABCG4Q9H172 646 aa2.65□□□□□ -1.99
CD46-215ENST00000488596 DCLRE1BQ9H816 532 aa2.65□□□□□ -1.99
CD46-215ENST00000488596 MARCH7Q9H992 704 aa2.65□□□□□ -1.99
CD46-215ENST00000488596 COMMD8Q9NX08 183 aa2.65□□□□□ -1.99
CD46-215ENST00000488596 CYP39A1Q9NYL5 469 aa2.65□□□□□ -1.99
CD46-215ENST00000488596 TECRQ9NZ01 308 aaKnown RBP2.65□□□□□ -1.99
CD46-215ENST00000488596 FETUBQ9UGM5 382 aa2.65□□□□□ -1.99
CD46-215ENST00000488596 TDRKHQ9Y2W6 561 aaKnown RBP2.65□□□□□ -1.99
CD46-215ENST00000488596 MOB4Q9Y3A3 225 aa2.65□□□□□ -1.99
CD46-215ENST00000488596 TEX264Q9Y6I9 313 aa2.65□□□□□ -1.99
CD46-215ENST00000488596 TDRD15B5MCY1 1934 aaKnown RBP2.65□□□□□ -1.99
CD46-215ENST00000488596 UMODL1Q5DID0 1318 aa2.65□□□□□ -1.99
CD46-215ENST00000488596 SALL1Q9NSC2 1324 aa2.65□□□□□ -1.99
CD46-215ENST00000488596 IGLV4-3A0A075B6K6 122 aa2.64□□□□□ -1.99
CD46-215ENST00000488596 IGHV3OR16-10A0A075B7F0 116 aa2.64□□□□□ -1.99
CD46-215ENST00000488596 LOC390937A0A1W2PQ73 354 aa2.64□□□□□ -1.99
CD46-215ENST00000488596 SYCE3A1L190 88 aa2.64□□□□□ -1.99
CD46-215ENST00000488596 IGLON5A6NGN9 336 aa2.64□□□□□ -1.99
CD46-215ENST00000488596 CCDC69A6NI79 296 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms