RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 C6orf136Q5SQH8 315 aa9.7□□□□□ -0.86
SKA1-204ENST00000488454 MRM1Q6IN84 353 aaKnown RBP9.7□□□□□ -0.86
SKA1-204ENST00000488454 GALNT18Q6P9A2 607 aa9.7□□□□□ -0.86
SKA1-204ENST00000488454 SHISA6Q6ZSJ9 500 aa9.7□□□□□ -0.86
SKA1-204ENST00000488454 SPATA19Q7Z5L4 167 aa9.7□□□□□ -0.86
SKA1-204ENST00000488454 VASH2Q86V25 355 aa9.7□□□□□ -0.86
SKA1-204ENST00000488454 ZNF595Q8IYB9 648 aa9.7□□□□□ -0.86
SKA1-204ENST00000488454 LRRC34Q8IZ02 419 aa9.7□□□□□ -0.86
SKA1-204ENST00000488454 TMEM132CQ8N3T6 1108 aa9.7□□□□□ -0.86
SKA1-204ENST00000488454 FAM47BQ8NA70 645 aa9.7□□□□□ -0.86
SKA1-204ENST00000488454 OR2Y1Q8NGV0 311 aa9.7□□□□□ -0.86
SKA1-204ENST00000488454 CDC26Q8NHZ8 85 aa9.7□□□□□ -0.86
SKA1-204ENST00000488454 ZCCHC14Q8WYQ9 949 aaKnown RBP9.7□□□□□ -0.86
SKA1-204ENST00000488454 TANKQ92844 425 aa9.7□□□□□ -0.86
SKA1-204ENST00000488454 CHMP6Q96FZ7 201 aa9.7□□□□□ -0.86
SKA1-204ENST00000488454 VPS50Q96JG6 964 aa9.7□□□□□ -0.86
SKA1-204ENST00000488454 CCNL2Q96S94 520 aaPredicted RBP9.7□□□□□ -0.86
SKA1-204ENST00000488454 SIKE1Q9BRV8 207 aa9.7□□□□□ -0.86
SKA1-204ENST00000488454 CRB3Q9BUF7 120 aa9.7□□□□□ -0.86
SKA1-204ENST00000488454 EBPLQ9BY08 206 aa9.7□□□□□ -0.86
SKA1-204ENST00000488454 ZNF717Q9BY31 904 aaPredicted RBP9.7□□□□□ -0.86
SKA1-204ENST00000488454 RBCK1Q9BYM8 510 aa9.7□□□□□ -0.86
SKA1-204ENST00000488454 ACTL8Q9H568 366 aa9.7□□□□□ -0.86
SKA1-204ENST00000488454 RPF2Q9H7B2 306 aaKnown RBP9.7□□□□□ -0.86
SKA1-204ENST00000488454 NPHS2Q9NP85 383 aa9.7□□□□□ -0.86
SKA1-204ENST00000488454 PRTFDC1Q9NRG1 225 aa9.7□□□□□ -0.86
SKA1-204ENST00000488454 SEMA3GQ9NS98 782 aa9.7□□□□□ -0.86
SKA1-204ENST00000488454 FAM53CQ9NYF3 392 aa9.7□□□□□ -0.86
SKA1-204ENST00000488454 KCMF1Q9P0J7 381 aa9.7□□□□□ -0.86
SKA1-204ENST00000488454 C3orf18Q9UK00 162 aa9.7□□□□□ -0.86
SKA1-204ENST00000488454 TCFL5Q9UL49 500 aa9.7□□□□□ -0.86
SKA1-204ENST00000488454 WBP11Q9Y2W2 641 aaKnown RBP9.7□□□□□ -0.86
SKA1-204ENST00000488454 ATG4BQ9Y4P1 393 aa9.7□□□□□ -0.86
SKA1-204ENST00000488454 POLR3HQ9Y535 204 aaPredicted RBP9.7□□□□□ -0.86
SKA1-204ENST00000488454 ASB4Q9Y574 426 aa9.7□□□□□ -0.86
SKA1-204ENST00000488454 PCDHGA6Q9Y5G7 932 aa9.7□□□□□ -0.86
SKA1-204ENST00000488454 MDC1Q14676 2089 aaKnown RBP9.7□□□□□ -0.86
SKA1-204ENST00000488454 SPTBP11277 2137 aa9.7□□□□□ -0.86
SKA1-204ENST00000488454 A0A1W2PR48 441 aa9.69□□□□□ -0.86
SKA1-204ENST00000488454 TMEM229AB2RXF0 380 aa9.69□□□□□ -0.86
SKA1-204ENST00000488454 SDHDO14521 159 aa9.69□□□□□ -0.86
SKA1-204ENST00000488454 PCDH17O14917 1159 aa9.69□□□□□ -0.86
SKA1-204ENST00000488454 CTNSO60931 367 aa9.69□□□□□ -0.86
SKA1-204ENST00000488454 JRKO75564 520 aa9.69□□□□□ -0.86
SKA1-204ENST00000488454 KLF7O75840 302 aaPredicted RBP9.69□□□□□ -0.86
SKA1-204ENST00000488454 JUNP05412 331 aaKnown RBP9.69□□□□□ -0.86
SKA1-204ENST00000488454 NR2F6P10588 404 aa9.69□□□□□ -0.86
SKA1-204ENST00000488454 PRPS2P11908 318 aa9.69□□□□□ -0.86
SKA1-204ENST00000488454 DRD2P14416 443 aa9.69□□□□□ -0.86
SKA1-204ENST00000488454 PCSK2P16519 638 aa9.69□□□□□ -0.86
SKA1-204ENST00000488454 DDX5P17844 614 aaKnown RBP9.69□□□□□ -0.86
SKA1-204ENST00000488454 EPHA3P29320 983 aa9.69□□□□□ -0.86
SKA1-204ENST00000488454 PPP2R1BP30154 601 aa9.69□□□□□ -0.86
SKA1-204ENST00000488454 ASMTP46597 345 aa9.69□□□□□ -0.86
SKA1-204ENST00000488454 ALDH9A1P49189 494 aa9.69□□□□□ -0.86
SKA1-204ENST00000488454 ADAMTS20P59510 1910 aa9.69□□□□□ -0.86
SKA1-204ENST00000488454 ERVK-8P63133 956 aa9.69□□□□□ -0.86
SKA1-204ENST00000488454 RAE1P78406 368 aaKnown RBP9.69□□□□□ -0.86
SKA1-204ENST00000488454 TNFRSF17Q02223 184 aa9.69□□□□□ -0.86
SKA1-204ENST00000488454 KLC1Q07866 573 aa9.69□□□□□ -0.86
SKA1-204ENST00000488454 ACTN3Q08043 901 aaPredicted RBP9.69□□□□□ -0.86
SKA1-204ENST00000488454 ZNF763Q0D2J5 394 aa9.69□□□□□ -0.86
SKA1-204ENST00000488454 C2orf80Q0P641 193 aa9.69□□□□□ -0.86
SKA1-204ENST00000488454 STX4Q12846 297 aa9.69□□□□□ -0.86
SKA1-204ENST00000488454 RPS6KA2Q15349 733 aa9.69□□□□□ -0.86
SKA1-204ENST00000488454 TLR1Q15399 786 aa9.69□□□□□ -0.86
SKA1-204ENST00000488454 NSDHLQ15738 373 aa9.69□□□□□ -0.86
SKA1-204ENST00000488454 NDUFAF5Q5TEU4 345 aa9.69□□□□□ -0.86
SKA1-204ENST00000488454 VWA5B1Q5TIE3 1220 aa9.69□□□□□ -0.86
SKA1-204ENST00000488454 IL23RQ5VWK5 629 aa9.69□□□□□ -0.86
SKA1-204ENST00000488454 EPGNQ6UW88 154 aa9.69□□□□□ -0.86
SKA1-204ENST00000488454 ZC3H7AQ8IWR0 971 aaKnown RBP9.69□□□□□ -0.86
SKA1-204ENST00000488454 FAM9CQ8IZT9 166 aa9.69□□□□□ -0.86
SKA1-204ENST00000488454 VWA5B2Q8N398 1253 aa9.69□□□□□ -0.86
SKA1-204ENST00000488454 CEP70Q8NHQ1 597 aa9.69□□□□□ -0.86
SKA1-204ENST00000488454 C16orf78Q8WTQ4 265 aa9.69□□□□□ -0.86
SKA1-204ENST00000488454 TM4SF18Q96CE8 201 aa9.69□□□□□ -0.86
SKA1-204ENST00000488454 THOC1Q96FV9 657 aaKnown RBP9.69□□□□□ -0.86
SKA1-204ENST00000488454 RILPQ96NA2 401 aa9.69□□□□□ -0.86
SKA1-204ENST00000488454 PTCHD1Q96NR3 888 aa9.69□□□□□ -0.86
SKA1-204ENST00000488454 WDR55Q9H6Y2 383 aaPredicted RBP9.69□□□□□ -0.86
SKA1-204ENST00000488454 FGFR1OP2Q9NVK5 253 aa9.69□□□□□ -0.86
SKA1-204ENST00000488454 NOP53Q9NZM5 478 aaKnown RBP9.69□□□□□ -0.86
SKA1-204ENST00000488454 GIMAP2Q9UG22 337 aa9.69□□□□□ -0.86
SKA1-204ENST00000488454 IL17BQ9UHF5 180 aa9.69□□□□□ -0.86
SKA1-204ENST00000488454 DCTN4Q9UJW0 460 aa9.69□□□□□ -0.86
SKA1-204ENST00000488454 DLGAP4Q9Y2H0 992 aa9.69□□□□□ -0.86
SKA1-204ENST00000488454 RAXQ9Y2V3 346 aa9.69□□□□□ -0.86
SKA1-204ENST00000488454 MMACHCQ9Y4U1 282 aa9.69□□□□□ -0.86
SKA1-204ENST00000488454 A0A0G2JND7 137 aa9.68□□□□□ -0.86
SKA1-204ENST00000488454 C1orf226A1L170 272 aa9.68□□□□□ -0.86
SKA1-204ENST00000488454 CDC14CA4D256 554 aa9.68□□□□□ -0.86
SKA1-204ENST00000488454 GMNCA6NCL1 334 aa9.68□□□□□ -0.86
SKA1-204ENST00000488454 SYNDIG1LA6NDD5 238 aa9.68□□□□□ -0.86
SKA1-204ENST00000488454 ZNF891A8MT65 544 aaPredicted RBP9.68□□□□□ -0.86
SKA1-204ENST00000488454 IDSB3KWA1 339 aa9.68□□□□□ -0.86
SKA1-204ENST00000488454 CYR61O00622 381 aa9.68□□□□□ -0.86
SKA1-204ENST00000488454 PEX12O00623 359 aa9.68□□□□□ -0.86
SKA1-204ENST00000488454 ALOX12BO75342 701 aa9.68□□□□□ -0.86
SKA1-204ENST00000488454 AIFM1O95831 613 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms