RNA–Protein interactions for RNA: ENST00000487711.5

TTC3-220, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-220ENST00000487711 RHOXF1Q8NHV9 184 aa3.16□□□□□ -1.9
TTC3-220ENST00000487711 SPATA18Q8TC71 538 aa3.16□□□□□ -1.9
TTC3-220ENST00000487711 ZPLD1Q8TCW7 415 aa3.16□□□□□ -1.9
TTC3-220ENST00000487711 GANCQ8TET4 914 aa3.16□□□□□ -1.9
TTC3-220ENST00000487711 AP2M1Q96CW1 435 aa3.16□□□□□ -1.9
TTC3-220ENST00000487711 SNRNP40Q96DI7 357 aaKnown RBP3.16□□□□□ -1.9
TTC3-220ENST00000487711 RUNDC3BQ96NL0 473 aa3.16□□□□□ -1.9
TTC3-220ENST00000487711 COPS7BQ9H9Q2 264 aaPredicted RBP3.16□□□□□ -1.9
TTC3-220ENST00000487711 PLEK2Q9NYT0 353 aa3.16□□□□□ -1.9
TTC3-220ENST00000487711 CPQQ9Y646 472 aa3.16□□□□□ -1.9
TTC3-220ENST00000487711 CECR2Q9BXF3 1484 aa3.16□□□□□ -1.9
TTC3-220ENST00000487711 A0A087WWV3 80 aa3.15□□□□□ -1.91
TTC3-220ENST00000487711 TEX48A0A1B0GUV7 120 aa3.15□□□□□ -1.91
TTC3-220ENST00000487711 BCLAF3A2AJT9 711 aaKnown RBP3.15□□□□□ -1.91
TTC3-220ENST00000487711 GTPBP10A4D1E9 387 aaKnown RBP3.15□□□□□ -1.91
TTC3-220ENST00000487711 A4D1N5 150 aa3.15□□□□□ -1.91
TTC3-220ENST00000487711 SRRM4A7MD48 611 aaKnown RBP3.15□□□□□ -1.91
TTC3-220ENST00000487711 E9PAM4 449 aa3.15□□□□□ -1.91
TTC3-220ENST00000487711 NEDD8-MDP1E9PL57 170 aa3.15□□□□□ -1.91
TTC3-220ENST00000487711 H0Y626 953 aa3.15□□□□□ -1.91
TTC3-220ENST00000487711 H0YIG0 161 aa3.15□□□□□ -1.91
TTC3-220ENST00000487711 SLC33A1O00400 549 aaPredicted RBP3.15□□□□□ -1.91
TTC3-220ENST00000487711 CCSO14618 274 aa3.15□□□□□ -1.91
TTC3-220ENST00000487711 CHUKO15111 745 aa3.15□□□□□ -1.91
TTC3-220ENST00000487711 IGHG1P01857 330 aa3.15□□□□□ -1.91
TTC3-220ENST00000487711 GLULP15104 373 aa3.15□□□□□ -1.91
TTC3-220ENST00000487711 FHITP49789 147 aa3.15□□□□□ -1.91
TTC3-220ENST00000487711 ROR1Q01973 937 aa3.15□□□□□ -1.91
TTC3-220ENST00000487711 ZNF506Q5JVG8 444 aa3.15□□□□□ -1.91
TTC3-220ENST00000487711 SNRNP48Q6IEG0 339 aaKnown RBP3.15□□□□□ -1.91
TTC3-220ENST00000487711 NHLRC1Q6VVB1 395 aa3.15□□□□□ -1.91
TTC3-220ENST00000487711 NUFIP2Q7Z417 695 aaKnown RBP3.15□□□□□ -1.91
TTC3-220ENST00000487711 LRRC49Q8IUZ0 686 aa3.15□□□□□ -1.91
TTC3-220ENST00000487711 CCDC83Q8IWF9 413 aa3.15□□□□□ -1.91
TTC3-220ENST00000487711 THEM5Q8N1Q8 247 aa3.15□□□□□ -1.91
TTC3-220ENST00000487711 FBXL16Q8N461 479 aa3.15□□□□□ -1.91
TTC3-220ENST00000487711 CLEC1AQ8NC01 280 aa3.15□□□□□ -1.91
TTC3-220ENST00000487711 CCDC197Q8NCU1 140 aa3.15□□□□□ -1.91
TTC3-220ENST00000487711 TYMSOSQ8TAI1 123 aa3.15□□□□□ -1.91
TTC3-220ENST00000487711 KIAA1524Q8TCG1 905 aa3.15□□□□□ -1.91
TTC3-220ENST00000487711 ULK4Q96C45 1275 aa3.15□□□□□ -1.91
TTC3-220ENST00000487711 ALDH8A1Q9H2A2 487 aaPredicted RBP3.15□□□□□ -1.91
TTC3-220ENST00000487711 ABCB8Q9NUT2 735 aa3.15□□□□□ -1.91
TTC3-220ENST00000487711 PRR34Q9NV39 138 aa3.15□□□□□ -1.91
TTC3-220ENST00000487711 ZNF581Q9P0T4 197 aa3.15□□□□□ -1.91
TTC3-220ENST00000487711 LEF1Q9UJU2 399 aaPredicted RBP3.15□□□□□ -1.91
TTC3-220ENST00000487711 SPATA2Q9UM82 520 aa3.15□□□□□ -1.91
TTC3-220ENST00000487711 WRNQ14191 1432 aaPredicted RBP eCLIP3.15□□□□□ -1.91
TTC3-220ENST00000487711 BICRAQ9NZM4 1560 aa3.15□□□□□ -1.91
TTC3-220ENST00000487711 CROCCQ5TZA2 2017 aa3.15□□□□□ -1.91
TTC3-220ENST00000487711 ACEP12821 1306 aa3.15□□□□□ -1.91
TTC3-220ENST00000487711 HMGXB3Q12766 1538 aa3.14□□□□□ -1.91
TTC3-220ENST00000487711 C13orf42A0A1B0GVH6 325 aa3.14□□□□□ -1.91
TTC3-220ENST00000487711 FAM149AA5PLN7 773 aa3.14□□□□□ -1.91
TTC3-220ENST00000487711 PHOX2AO14813 284 aa3.14□□□□□ -1.91
TTC3-220ENST00000487711 TTI1O43156 1089 aa3.14□□□□□ -1.91
TTC3-220ENST00000487711 ZNF354AO60765 605 aaPredicted RBP3.14□□□□□ -1.91
TTC3-220ENST00000487711 CSO75390 466 aaKnown RBP3.14□□□□□ -1.91
TTC3-220ENST00000487711 OR6A2O95222 327 aa3.14□□□□□ -1.91
TTC3-220ENST00000487711 SEMA4FO95754 770 aa3.14□□□□□ -1.91
TTC3-220ENST00000487711 CPA3P15088 417 aa3.14□□□□□ -1.91
TTC3-220ENST00000487711 ELK3P41970 407 aa3.14□□□□□ -1.91
TTC3-220ENST00000487711 MATKP42679 507 aa3.14□□□□□ -1.91
TTC3-220ENST00000487711 RGS19P49795 217 aa3.14□□□□□ -1.91
TTC3-220ENST00000487711 C11orf88Q6PI97 169 aa3.14□□□□□ -1.91
TTC3-220ENST00000487711 CYP4V2Q6ZWL3 525 aaPredicted RBP3.14□□□□□ -1.91
TTC3-220ENST00000487711 SH2D6Q7Z4S9 175 aa3.14□□□□□ -1.91
TTC3-220ENST00000487711 ADCK1Q86TW2 530 aa3.14□□□□□ -1.91
TTC3-220ENST00000487711 SYCP3Q8IZU3 236 aa3.14□□□□□ -1.91
TTC3-220ENST00000487711 ZNF781Q8N8C0 355 aa3.14□□□□□ -1.91
TTC3-220ENST00000487711 AGAP11Q8TF27 550 aa3.14□□□□□ -1.91
TTC3-220ENST00000487711 ITLN1Q8WWA0 313 aa3.14□□□□□ -1.91
TTC3-220ENST00000487711 TCP11Q8WWU5 503 aa3.14□□□□□ -1.91
TTC3-220ENST00000487711 GGHQ92820 318 aa3.14□□□□□ -1.91
TTC3-220ENST00000487711 JAKMIP1Q96N16 626 aaKnown RBP3.14□□□□□ -1.91
TTC3-220ENST00000487711 PANX3Q96QZ0 392 aa3.14□□□□□ -1.91
TTC3-220ENST00000487711 HSD17B14Q9BPX1 270 aa3.14□□□□□ -1.91
TTC3-220ENST00000487711 FAM212BQ9NTI7 297 aaPredicted RBP3.14□□□□□ -1.91
TTC3-220ENST00000487711 ZNF107Q9UII5 783 aaPredicted RBP3.14□□□□□ -1.91
TTC3-220ENST00000487711 MRPL11Q9Y3B7 192 aaKnown RBP3.14□□□□□ -1.91
TTC3-220ENST00000487711 FBXO7Q9Y3I1 522 aa3.14□□□□□ -1.91
TTC3-220ENST00000487711 OR1A2Q9Y585 309 aa3.14□□□□□ -1.91
TTC3-220ENST00000487711 UMODL1Q5DID0 1318 aa3.14□□□□□ -1.91
TTC3-220ENST00000487711 KIF21BO75037 1637 aa3.13□□□□□ -1.91
TTC3-220ENST00000487711 ZNF724A8MTY0 619 aa3.13□□□□□ -1.91
TTC3-220ENST00000487711 KIAA0513O60268 411 aa3.13□□□□□ -1.91
TTC3-220ENST00000487711 IGKV3-15P01624 115 aa3.13□□□□□ -1.91
TTC3-220ENST00000487711 FHP07954 510 aa3.13□□□□□ -1.91
TTC3-220ENST00000487711 HCKP08631 526 aa3.13□□□□□ -1.91
TTC3-220ENST00000487711 OR9G9P0C7N8 305 aa3.13□□□□□ -1.91
TTC3-220ENST00000487711 FAM200BP0CF97 657 aa3.13□□□□□ -1.91
TTC3-220ENST00000487711 ANPEPP15144 967 aa3.13□□□□□ -1.91
TTC3-220ENST00000487711 PTMSP20962 102 aa3.13□□□□□ -1.91
TTC3-220ENST00000487711 SERPINB6P35237 376 aa3.13□□□□□ -1.91
TTC3-220ENST00000487711 TCF7P36402 384 aaPredicted RBP3.13□□□□□ -1.91
TTC3-220ENST00000487711 CCR4P51679 360 aa3.13□□□□□ -1.91
TTC3-220ENST00000487711 SNU13P55769 128 aaKnown RBP3.13□□□□□ -1.91
TTC3-220ENST00000487711 ASIC1P78348 528 aa3.13□□□□□ -1.91
TTC3-220ENST00000487711 CYLC2Q14093 348 aaPredicted RBP3.13□□□□□ -1.91
TTC3-220ENST00000487711 NFE2L1Q14494 772 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms