RNA–Protein interactions for RNA: ENST00000487294.1

R3HDM1-218, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-218ENST00000487294 TAS2R42Q7RTR8 314 aa4.79□□□□□ -1.64
R3HDM1-218ENST00000487294 CDKL3Q8IVW4 592 aaPredicted RBP4.79□□□□□ -1.64
R3HDM1-218ENST00000487294 OR4N4Q8N0Y3 316 aa4.79□□□□□ -1.64
R3HDM1-218ENST00000487294 EID3Q8N140 333 aa4.79□□□□□ -1.64
R3HDM1-218ENST00000487294 TMEM132CQ8N3T6 1108 aa4.79□□□□□ -1.64
R3HDM1-218ENST00000487294 SIRT6Q8N6T7 355 aa4.79□□□□□ -1.64
R3HDM1-218ENST00000487294 AMER3Q8N944 861 aa4.79□□□□□ -1.64
R3HDM1-218ENST00000487294 MDS2Q8NDY4 140 aa4.79□□□□□ -1.64
R3HDM1-218ENST00000487294 OR13J1Q8NGT2 312 aa4.79□□□□□ -1.64
R3HDM1-218ENST00000487294 SUN3Q8TAQ9 357 aa4.79□□□□□ -1.64
R3HDM1-218ENST00000487294 ACTL9Q8TC94 416 aa4.79□□□□□ -1.64
R3HDM1-218ENST00000487294 RAB24Q969Q5 203 aa4.79□□□□□ -1.64
R3HDM1-218ENST00000487294 C8orf44Q96CB5 159 aa4.79□□□□□ -1.64
R3HDM1-218ENST00000487294 HAUS1Q96CS2 278 aa4.79□□□□□ -1.64
R3HDM1-218ENST00000487294 C10orf90Q96M02 699 aa4.79□□□□□ -1.64
R3HDM1-218ENST00000487294 OR2A5Q96R48 311 aa4.79□□□□□ -1.64
R3HDM1-218ENST00000487294 VKORC1Q9BQB6 163 aa4.79□□□□□ -1.64
R3HDM1-218ENST00000487294 APOL2Q9BQE5 337 aa4.79□□□□□ -1.64
R3HDM1-218ENST00000487294 TRIM51Q9BSJ1 452 aa4.79□□□□□ -1.64
R3HDM1-218ENST00000487294 GSTO2Q9H4Y5 243 aa4.79□□□□□ -1.64
R3HDM1-218ENST00000487294 TRIM45Q9H8W5 580 aaPredicted RBP4.79□□□□□ -1.64
R3HDM1-218ENST00000487294 LRRC40Q9H9A6 602 aa4.79□□□□□ -1.64
R3HDM1-218ENST00000487294 STMN3Q9NZ72 180 aa4.79□□□□□ -1.64
R3HDM1-218ENST00000487294 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.79□□□□□ -1.64
R3HDM1-218ENST00000487294 TINAGQ9UJW2 476 aa4.79□□□□□ -1.64
R3HDM1-218ENST00000487294 KLHL20Q9Y2M5 609 aa4.79□□□□□ -1.64
R3HDM1-218ENST00000487294 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.79□□□□□ -1.64
R3HDM1-218ENST00000487294 ZNF469Q96JG9 3925 aaPredicted RBP4.79□□□□□ -1.64
R3HDM1-218ENST00000487294 NSD1Q96L73 2696 aaPredicted RBP4.79□□□□□ -1.64
R3HDM1-218ENST00000487294 SCN2AQ99250 2005 aa4.79□□□□□ -1.64
R3HDM1-218ENST00000487294 PRRC2AP48634 2157 aaKnown RBP4.78□□□□□ -1.64
R3HDM1-218ENST00000487294 ABCA4P78363 2273 aa4.78□□□□□ -1.64
R3HDM1-218ENST00000487294 TCRBV7S2A1N4TA0A589 114 aa4.78□□□□□ -1.64
R3HDM1-218ENST00000487294 CCDC162PA2VCL2 907 aa4.78□□□□□ -1.64
R3HDM1-218ENST00000487294 FOXO6A8MYZ6 492 aa4.78□□□□□ -1.64
R3HDM1-218ENST00000487294 H0YIG0 161 aa4.78□□□□□ -1.64
R3HDM1-218ENST00000487294 H7C0C1 242 aa4.78□□□□□ -1.64
R3HDM1-218ENST00000487294 KPNA5O15131 536 aa4.78□□□□□ -1.64
R3HDM1-218ENST00000487294 TTI1O43156 1089 aa4.78□□□□□ -1.64
R3HDM1-218ENST00000487294 PSMD3O43242 534 aa4.78□□□□□ -1.64
R3HDM1-218ENST00000487294 ASNA1O43681 348 aa4.78□□□□□ -1.64
R3HDM1-218ENST00000487294 SUN1O94901 812 aa4.78□□□□□ -1.64
R3HDM1-218ENST00000487294 MATN4O95460 622 aa4.78□□□□□ -1.64
R3HDM1-218ENST00000487294 C1orf105O95561 183 aa4.78□□□□□ -1.64
R3HDM1-218ENST00000487294 APOA4P06727 396 aa4.78□□□□□ -1.64
R3HDM1-218ENST00000487294 ITGAMP11215 1152 aa4.78□□□□□ -1.64
R3HDM1-218ENST00000487294 PKMP14618 531 aaKnown RBP4.78□□□□□ -1.64
R3HDM1-218ENST00000487294 FBLP22087 321 aaKnown RBP4.78□□□□□ -1.64
R3HDM1-218ENST00000487294 ATP5DP30049 168 aa4.78□□□□□ -1.64
R3HDM1-218ENST00000487294 CTNNA1P35221 906 aaKnown RBP4.78□□□□□ -1.64
R3HDM1-218ENST00000487294 PPARGP37231 505 aaPredicted RBP4.78□□□□□ -1.64
R3HDM1-218ENST00000487294 ATP5OP48047 213 aa4.78□□□□□ -1.64
R3HDM1-218ENST00000487294 MARCKSL1P49006 195 aa4.78□□□□□ -1.64
R3HDM1-218ENST00000487294 EFNA3P52797 238 aa4.78□□□□□ -1.64
R3HDM1-218ENST00000487294 EIF3EP60228 445 aaKnown RBP4.78□□□□□ -1.64
R3HDM1-218ENST00000487294 CTXN1P60606 82 aa4.78□□□□□ -1.64
R3HDM1-218ENST00000487294 CSNK1G2P78368 415 aa4.78□□□□□ -1.64
R3HDM1-218ENST00000487294 TFF3Q07654 80 aa4.78□□□□□ -1.64
R3HDM1-218ENST00000487294 HSPA14Q0VDF9 509 aa4.78□□□□□ -1.64
R3HDM1-218ENST00000487294 GBX1Q14549 363 aa4.78□□□□□ -1.64
R3HDM1-218ENST00000487294 ARHGAP19Q14CB8 494 aa4.78□□□□□ -1.64
R3HDM1-218ENST00000487294 P3H1Q32P28 736 aa4.78□□□□□ -1.64
R3HDM1-218ENST00000487294 C3orf36Q3SXR2 165 aa4.78□□□□□ -1.64
R3HDM1-218ENST00000487294 SYTL3Q4VX76 610 aa4.78□□□□□ -1.64
R3HDM1-218ENST00000487294 ZNF766Q5HY98 468 aa4.78□□□□□ -1.64
R3HDM1-218ENST00000487294 ACER2Q5QJU3 275 aa4.78□□□□□ -1.64
R3HDM1-218ENST00000487294 KAZNQ674X7 775 aa4.78□□□□□ -1.64
R3HDM1-218ENST00000487294 FAAH2Q6GMR7 532 aa4.78□□□□□ -1.64
R3HDM1-218ENST00000487294 ZNF425Q6IV72 752 aa4.78□□□□□ -1.64
R3HDM1-218ENST00000487294 AFTPHQ6ULP2 937 aa4.78□□□□□ -1.64
R3HDM1-218ENST00000487294 Q6YL49 198 aa4.78□□□□□ -1.64
R3HDM1-218ENST00000487294 ZNF534Q76KX8 674 aa4.78□□□□□ -1.64
R3HDM1-218ENST00000487294 LINC00523Q86TU6 105 aa4.78□□□□□ -1.64
R3HDM1-218ENST00000487294 CEP97Q8IW35 865 aa4.78□□□□□ -1.64
R3HDM1-218ENST00000487294 RAB42Q8N4Z0 105 aa4.78□□□□□ -1.64
R3HDM1-218ENST00000487294 BEND2Q8NDZ0 799 aa4.78□□□□□ -1.64
R3HDM1-218ENST00000487294 MAGEC3Q8TD91 643 aa4.78□□□□□ -1.64
R3HDM1-218ENST00000487294 ASB10Q8WXI3 467 aa4.78□□□□□ -1.64
R3HDM1-218ENST00000487294 HDAC10Q969S8 669 aa4.78□□□□□ -1.64
R3HDM1-218ENST00000487294 MAGED4Q96JG8 741 aa4.78□□□□□ -1.64
R3HDM1-218ENST00000487294 ZNF354BQ96LW1 612 aa4.78□□□□□ -1.64
R3HDM1-218ENST00000487294 CCDC42Q96M95 316 aa4.78□□□□□ -1.64
R3HDM1-218ENST00000487294 CHP1Q99653 195 aa4.78□□□□□ -1.64
R3HDM1-218ENST00000487294 OLFM1Q99784 485 aa4.78□□□□□ -1.64
R3HDM1-218ENST00000487294 FOXC2Q99958 501 aa4.78□□□□□ -1.64
R3HDM1-218ENST00000487294 TMEM121Q9BTD3 319 aa4.78□□□□□ -1.64
R3HDM1-218ENST00000487294 TSSK1BQ9BXA7 367 aa4.78□□□□□ -1.64
R3HDM1-218ENST00000487294 OSBPL8Q9BZF1 889 aa4.78□□□□□ -1.64
R3HDM1-218ENST00000487294 REXO4Q9GZR2 422 aaKnown RBP4.78□□□□□ -1.64
R3HDM1-218ENST00000487294 NHEJ1Q9H9Q4 299 aaPredicted RBP4.78□□□□□ -1.64
R3HDM1-218ENST00000487294 MMP25Q9NPA2 562 aa4.78□□□□□ -1.64
R3HDM1-218ENST00000487294 ABHD10Q9NUJ1 306 aa4.78□□□□□ -1.64
R3HDM1-218ENST00000487294 SYBUQ9NX95 663 aa4.78□□□□□ -1.64
R3HDM1-218ENST00000487294 SPATA7Q9P0W8 599 aa4.78□□□□□ -1.64
R3HDM1-218ENST00000487294 TRPC4Q9UBN4 977 aa4.78□□□□□ -1.64
R3HDM1-218ENST00000487294 KCNN3Q9UGI6 736 aa4.78□□□□□ -1.64
R3HDM1-218ENST00000487294 ITGB1BP2Q9UKP3 347 aa4.78□□□□□ -1.64
R3HDM1-218ENST00000487294 PACSIN3Q9UKS6 424 aa4.78□□□□□ -1.64
R3HDM1-218ENST00000487294 SLC39A10Q9ULF5 831 aa4.78□□□□□ -1.64
R3HDM1-218ENST00000487294 PLAGL1Q9UM63 463 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms