RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 RHBDF1Q96CC6 855 aa17.95■□□□□ 0.46
SMPDL3A-202ENST00000487215 RPH3AQ9Y2J0 694 aaPredicted RBP17.95■□□□□ 0.46
SMPDL3A-202ENST00000487215 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.95■□□□□ 0.46
SMPDL3A-202ENST00000487215 ANKHD1Q8IWZ3 2542 aaKnown RBP17.95■□□□□ 0.46
SMPDL3A-202ENST00000487215 A6NNC1 897 aa17.94■□□□□ 0.46
SMPDL3A-202ENST00000487215 LDB3O75112 727 aa17.94■□□□□ 0.46
SMPDL3A-202ENST00000487215 ETHE1O95571 254 aa17.94■□□□□ 0.46
SMPDL3A-202ENST00000487215 HPDP32754 393 aaPredicted RBP17.94■□□□□ 0.46
SMPDL3A-202ENST00000487215 PEX19P40855 299 aa17.94■□□□□ 0.46
SMPDL3A-202ENST00000487215 FNTAP49354 379 aa17.94■□□□□ 0.46
SMPDL3A-202ENST00000487215 SERTAD2Q14140 314 aa17.94■□□□□ 0.46
SMPDL3A-202ENST00000487215 PPP1R7Q15435 360 aa17.94■□□□□ 0.46
SMPDL3A-202ENST00000487215 TSNQ15631 228 aaKnown RBP17.94■□□□□ 0.46
SMPDL3A-202ENST00000487215 HP1BP3Q5SSJ5 553 aaPredicted RBP17.94■□□□□ 0.46
SMPDL3A-202ENST00000487215 ADGRD1Q6QNK2 874 aa17.94■□□□□ 0.46
SMPDL3A-202ENST00000487215 SEM1Q6ZVN7 128 aa17.94■□□□□ 0.46
SMPDL3A-202ENST00000487215 FRA10AC1Q70Z53 315 aa17.94■□□□□ 0.46
SMPDL3A-202ENST00000487215 GOT1L1Q8NHS2 421 aaPredicted RBP17.94■□□□□ 0.46
SMPDL3A-202ENST00000487215 ZNF721Q8TF20 911 aa17.94■□□□□ 0.46
SMPDL3A-202ENST00000487215 CFAP36Q96G28 342 aa17.94■□□□□ 0.46
SMPDL3A-202ENST00000487215 ZNF703Q9H7S9 590 aaPredicted RBP17.94■□□□□ 0.46
SMPDL3A-202ENST00000487215 SH2D2AQ9NP31 389 aa17.94■□□□□ 0.46
SMPDL3A-202ENST00000487215 DMRT3Q9NQL9 472 aa17.94■□□□□ 0.46
SMPDL3A-202ENST00000487215 PRDM7Q9NQW5 492 aa17.94■□□□□ 0.46
SMPDL3A-202ENST00000487215 EDARQ9UNE0 448 aa17.94■□□□□ 0.46
SMPDL3A-202ENST00000487215 ACANP16112 2415 aa17.93■□□□□ 0.46
SMPDL3A-202ENST00000487215 MAP1AP78559 2803 aaPredicted RBP17.93■□□□□ 0.46
SMPDL3A-202ENST00000487215 PGRMC1O00264 195 aaKnown RBP17.93■□□□□ 0.46
SMPDL3A-202ENST00000487215 SYT5O00445 386 aa17.93■□□□□ 0.46
SMPDL3A-202ENST00000487215 PRAMEF4O60810 478 aa17.93■□□□□ 0.46
SMPDL3A-202ENST00000487215 RFPL3SP0C7P2 107 aa17.93■□□□□ 0.46
SMPDL3A-202ENST00000487215 FOSL1P15407 271 aa17.93■□□□□ 0.46
SMPDL3A-202ENST00000487215 DGKQP52824 942 aa17.93■□□□□ 0.46
SMPDL3A-202ENST00000487215 ADAM8P78325 824 aa17.93■□□□□ 0.46
SMPDL3A-202ENST00000487215 ID2Q02363 134 aa17.93■□□□□ 0.46
SMPDL3A-202ENST00000487215 ASPHQ12797 758 aa17.93■□□□□ 0.46
SMPDL3A-202ENST00000487215 MPEG1Q2M385 716 aa17.93■□□□□ 0.46
SMPDL3A-202ENST00000487215 ZNF791Q3KP31 576 aaPredicted RBP17.93■□□□□ 0.46
SMPDL3A-202ENST00000487215 FLYWCH1Q4VC44 716 aa17.93■□□□□ 0.46
SMPDL3A-202ENST00000487215 PIGGQ5H8A4 983 aa17.93■□□□□ 0.46
SMPDL3A-202ENST00000487215 PRAMEF9Q5VWM5 478 aa17.93■□□□□ 0.46
SMPDL3A-202ENST00000487215 ADAMTSL2Q86TH1 951 aa17.93■□□□□ 0.46
SMPDL3A-202ENST00000487215 ULK2Q8IYT8 1036 aa17.93■□□□□ 0.46
SMPDL3A-202ENST00000487215 ANKRD49Q8WVL7 239 aa17.93■□□□□ 0.46
SMPDL3A-202ENST00000487215 KIAA1191Q96A73 305 aa17.93■□□□□ 0.46
SMPDL3A-202ENST00000487215 RUNDC3BQ96NL0 473 aa17.93■□□□□ 0.46
SMPDL3A-202ENST00000487215 F2RL3Q96RI0 385 aa17.93■□□□□ 0.46
SMPDL3A-202ENST00000487215 SH3GL2Q99962 352 aa17.93■□□□□ 0.46
SMPDL3A-202ENST00000487215 WDR83Q9BRX9 315 aaKnown RBP17.93■□□□□ 0.46
SMPDL3A-202ENST00000487215 PITHD1Q9GZP4 211 aaPredicted RBP17.93■□□□□ 0.46
SMPDL3A-202ENST00000487215 LYRM4Q9HD34 91 aa17.93■□□□□ 0.46
SMPDL3A-202ENST00000487215 TRMT1Q9NXH9 659 aaKnown RBP17.93■□□□□ 0.46
SMPDL3A-202ENST00000487215 GPRC5BQ9NZH0 403 aa17.93■□□□□ 0.46
SMPDL3A-202ENST00000487215 CTNNAL1Q9UBT7 734 aa17.93■□□□□ 0.46
SMPDL3A-202ENST00000487215 COPS7AQ9UBW8 275 aa17.93■□□□□ 0.46
SMPDL3A-202ENST00000487215 ASIC3Q9UHC3 531 aa17.93■□□□□ 0.46
SMPDL3A-202ENST00000487215 CBLCQ9ULV8 474 aa17.93■□□□□ 0.46
SMPDL3A-202ENST00000487215 CHMP2BQ9UQN3 213 aa17.93■□□□□ 0.46
SMPDL3A-202ENST00000487215 PSAT1Q9Y617 370 aa17.93■□□□□ 0.46
SMPDL3A-202ENST00000487215 ABCA2Q9BZC7 2435 aa17.92■□□□□ 0.46
SMPDL3A-202ENST00000487215 AKAP6Q13023 2319 aa17.92■□□□□ 0.46
SMPDL3A-202ENST00000487215 EML6Q6ZMW3 1958 aa17.92■□□□□ 0.46
SMPDL3A-202ENST00000487215 GOLGA6L10A0A0M3HER8 536 aa17.92■□□□□ 0.46
SMPDL3A-202ENST00000487215 FAM95CA0A1B0GW59 222 aa17.92■□□□□ 0.46
SMPDL3A-202ENST00000487215 HSPB2A8KAH6 182 aa17.92■□□□□ 0.46
SMPDL3A-202ENST00000487215 ELK3P41970 407 aa17.92■□□□□ 0.46
SMPDL3A-202ENST00000487215 TAS2R39P59534 338 aa17.92■□□□□ 0.46
SMPDL3A-202ENST00000487215 HSPB2Q16082 182 aa17.92■□□□□ 0.46
SMPDL3A-202ENST00000487215 SLC22A10Q63ZE4 541 aa17.92■□□□□ 0.46
SMPDL3A-202ENST00000487215 PAMR1Q6UXH9 720 aa17.92■□□□□ 0.46
SMPDL3A-202ENST00000487215 ZNF793Q6ZN11 406 aa17.92■□□□□ 0.46
SMPDL3A-202ENST00000487215 FBXW8Q8N3Y1 598 aa17.92■□□□□ 0.46
SMPDL3A-202ENST00000487215 NAXEQ8NCW5 288 aa17.92■□□□□ 0.46
SMPDL3A-202ENST00000487215 NUBPLQ8TB37 319 aa17.92■□□□□ 0.46
SMPDL3A-202ENST00000487215 FAM222BQ8WU58 562 aa17.92■□□□□ 0.46
SMPDL3A-202ENST00000487215 MBD6Q96DN6 1003 aa17.92■□□□□ 0.46
SMPDL3A-202ENST00000487215 MAPKAP1Q9BPZ7 522 aa17.92■□□□□ 0.46
SMPDL3A-202ENST00000487215 TMEM79Q9BSE2 394 aa17.92■□□□□ 0.46
SMPDL3A-202ENST00000487215 CAPS2Q9BXY5 557 aa17.92■□□□□ 0.46
SMPDL3A-202ENST00000487215 SLC6A15Q9H2J7 730 aa17.92■□□□□ 0.46
SMPDL3A-202ENST00000487215 ZNF490Q9ULM2 529 aaPredicted RBP17.92■□□□□ 0.46
SMPDL3A-202ENST00000487215 PCDHGB3Q9Y5G1 929 aa17.92■□□□□ 0.46
SMPDL3A-202ENST00000487215 HRNRQ86YZ3 2850 aaPredicted RBP17.92■□□□□ 0.46
SMPDL3A-202ENST00000487215 ABCA4P78363 2273 aa17.91■□□□□ 0.46
SMPDL3A-202ENST00000487215 NCF1BA6NI72 391 aaPredicted RBP17.91■□□□□ 0.46
SMPDL3A-202ENST00000487215 LRRC3CA6NJW4 275 aa17.91■□□□□ 0.46
SMPDL3A-202ENST00000487215 NCF1CA8MVU1 366 aaPredicted RBP17.91■□□□□ 0.46
SMPDL3A-202ENST00000487215 NCF1P14598 390 aaPredicted RBP17.91■□□□□ 0.46
SMPDL3A-202ENST00000487215 BMP5P22003 454 aa17.91■□□□□ 0.46
SMPDL3A-202ENST00000487215 KCNC1P48547 511 aa17.91■□□□□ 0.46
SMPDL3A-202ENST00000487215 ASCL1P50553 236 aa17.91■□□□□ 0.46
SMPDL3A-202ENST00000487215 KCNJ2P63252 427 aa17.91■□□□□ 0.46
SMPDL3A-202ENST00000487215 TGM3Q08188 693 aa17.91■□□□□ 0.46
SMPDL3A-202ENST00000487215 PRAMEF20Q5VT98 475 aa17.91■□□□□ 0.46
SMPDL3A-202ENST00000487215 STEAP4Q687X5 459 aa17.91■□□□□ 0.46
SMPDL3A-202ENST00000487215 LYPD8Q6UX82 237 aa17.91■□□□□ 0.46
SMPDL3A-202ENST00000487215 CAMKMTQ7Z624 323 aa17.91■□□□□ 0.46
SMPDL3A-202ENST00000487215 UBE3DQ7Z6J8 389 aa17.91■□□□□ 0.46
SMPDL3A-202ENST00000487215 ZC3HC1Q86WB0 502 aaKnown RBP17.91■□□□□ 0.46
SMPDL3A-202ENST00000487215 C9orf40Q8IXQ3 194 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms