RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 CAPN10Q9HC96 672 aa6.68□□□□□ -1.34
SF3A3-206ENST00000487062 SLC6A13Q9NSD5 602 aa6.68□□□□□ -1.34
SF3A3-206ENST00000487062 UCKL1Q9NWZ5 548 aa6.68□□□□□ -1.34
SF3A3-206ENST00000487062 TEX10Q9NXF1 929 aaPredicted RBP6.68□□□□□ -1.34
SF3A3-206ENST00000487062 NLGN3Q9NZ94 848 aa6.68□□□□□ -1.34
SF3A3-206ENST00000487062 LRIT1Q9P2V4 623 aa6.68□□□□□ -1.34
SF3A3-206ENST00000487062 EPHA6Q9UF33 1036 aa6.68□□□□□ -1.34
SF3A3-206ENST00000487062 RIMS3Q9UJD0 308 aa6.68□□□□□ -1.34
SF3A3-206ENST00000487062 PILRBQ9UKJ0 227 aa6.68□□□□□ -1.34
SF3A3-206ENST00000487062 UTS2RQ9UKP6 389 aa6.68□□□□□ -1.34
SF3A3-206ENST00000487062 USP22Q9UPT9 525 aa6.68□□□□□ -1.34
SF3A3-206ENST00000487062 ASB4Q9Y574 426 aa6.68□□□□□ -1.34
SF3A3-206ENST00000487062 SNX11Q9Y5W9 270 aa6.68□□□□□ -1.34
SF3A3-206ENST00000487062 SLC22A7Q9Y694 548 aa6.68□□□□□ -1.34
SF3A3-206ENST00000487062 NUP214P35658 2090 aaPredicted RBP6.68□□□□□ -1.34
SF3A3-206ENST00000487062 EYSQ5T1H1 3165 aa6.67□□□□□ -1.34
SF3A3-206ENST00000487062 SCN3AQ9NY46 2000 aa6.67□□□□□ -1.34
SF3A3-206ENST00000487062 CACNA1IQ9P0X4 2223 aa6.67□□□□□ -1.34
SF3A3-206ENST00000487062 LOC105369274A0A096LPK9 316 aa6.67□□□□□ -1.34
SF3A3-206ENST00000487062 LOC102723532A0A0G2JNH3 316 aa6.67□□□□□ -1.34
SF3A3-206ENST00000487062 A0A1B0GTQ1 180 aa6.67□□□□□ -1.34
SF3A3-206ENST00000487062 A0A1W2PR48 441 aa6.67□□□□□ -1.34
SF3A3-206ENST00000487062 SLC9B1P1A6NJY1 282 aa6.67□□□□□ -1.34
SF3A3-206ENST00000487062 C4orf51C9J302 202 aa6.67□□□□□ -1.34
SF3A3-206ENST00000487062 P2RX6O15547 441 aa6.67□□□□□ -1.34
SF3A3-206ENST00000487062 PROM1O43490 865 aa6.67□□□□□ -1.34
SF3A3-206ENST00000487062 DUX1O43812 170 aa6.67□□□□□ -1.34
SF3A3-206ENST00000487062 SH3BP5O60239 455 aa6.67□□□□□ -1.34
SF3A3-206ENST00000487062 ERAL1O75616 437 aaKnown RBP6.67□□□□□ -1.34
SF3A3-206ENST00000487062 KCNK5O95279 499 aa6.67□□□□□ -1.34
SF3A3-206ENST00000487062 AIFM1O95831 613 aa6.67□□□□□ -1.34
SF3A3-206ENST00000487062 NTRK1P04629 796 aa6.67□□□□□ -1.34
SF3A3-206ENST00000487062 RAP2AP10114 183 aa6.67□□□□□ -1.34
SF3A3-206ENST00000487062 NR2F6P10588 404 aa6.67□□□□□ -1.34
SF3A3-206ENST00000487062 IL1RNP18510 177 aa6.67□□□□□ -1.34
SF3A3-206ENST00000487062 CSNK2A2P19784 350 aaPredicted RBP6.67□□□□□ -1.34
SF3A3-206ENST00000487062 EPHA8P29322 1005 aaPredicted RBP6.67□□□□□ -1.34
SF3A3-206ENST00000487062 ALDH4A1P30038 563 aa6.67□□□□□ -1.34
SF3A3-206ENST00000487062 MPIP34949 423 aa6.67□□□□□ -1.34
SF3A3-206ENST00000487062 PCGF2P35227 344 aa6.67□□□□□ -1.34
SF3A3-206ENST00000487062 CRATP43155 626 aa6.67□□□□□ -1.34
SF3A3-206ENST00000487062 LSSP48449 732 aa6.67□□□□□ -1.34
SF3A3-206ENST00000487062 PRIM2P49643 509 aa6.67□□□□□ -1.34
SF3A3-206ENST00000487062 ARL4DP49703 201 aa6.67□□□□□ -1.34
SF3A3-206ENST00000487062 ANXA11P50995 505 aaKnown RBP6.67□□□□□ -1.34
SF3A3-206ENST00000487062 PCBP4P57723 403 aaKnown RBP6.67□□□□□ -1.34
SF3A3-206ENST00000487062 VSX2P58304 361 aaPredicted RBP6.67□□□□□ -1.34
SF3A3-206ENST00000487062 PPP1CAP62136 330 aa6.67□□□□□ -1.34
SF3A3-206ENST00000487062 GPLD1P80108 840 aa6.67□□□□□ -1.34
SF3A3-206ENST00000487062 BNIP3Q12983 259 aa6.67□□□□□ -1.34
SF3A3-206ENST00000487062 VEZF1Q14119 521 aa6.67□□□□□ -1.34
SF3A3-206ENST00000487062 MPEG1Q2M385 716 aa6.67□□□□□ -1.34
SF3A3-206ENST00000487062 SPDYE7PQ495Y7 208 aa6.67□□□□□ -1.34
SF3A3-206ENST00000487062 DEFB134Q4QY38 66 aa6.67□□□□□ -1.34
SF3A3-206ENST00000487062 TCTE1Q5JU00 501 aa6.67□□□□□ -1.34
SF3A3-206ENST00000487062 WLSQ5T9L3 541 aa6.67□□□□□ -1.34
SF3A3-206ENST00000487062 INTS11Q5TA45 600 aaKnown RBP6.67□□□□□ -1.34
SF3A3-206ENST00000487062 OGFRL1Q5TC84 451 aaPredicted RBP6.67□□□□□ -1.34
SF3A3-206ENST00000487062 OR52E8Q6IFG1 317 aa6.67□□□□□ -1.34
SF3A3-206ENST00000487062 SLC48A1Q6P1K1 146 aa6.67□□□□□ -1.34
SF3A3-206ENST00000487062 BHLHB9Q6PI77 547 aa6.67□□□□□ -1.34
SF3A3-206ENST00000487062 RNF111Q6ZNA4 994 aa6.67□□□□□ -1.34
SF3A3-206ENST00000487062 FKBP9P1Q75LS8 142 aa6.67□□□□□ -1.34
SF3A3-206ENST00000487062 ERMP1Q7Z2K6 904 aa6.67□□□□□ -1.34
SF3A3-206ENST00000487062 GPR155Q7Z3F1 870 aa6.67□□□□□ -1.34
SF3A3-206ENST00000487062 PLXDC1Q8IUK5 500 aa6.67□□□□□ -1.34
SF3A3-206ENST00000487062 MCATQ8IVS2 390 aaKnown RBP6.67□□□□□ -1.34
SF3A3-206ENST00000487062 ZZZ3Q8IYH5 903 aa6.67□□□□□ -1.34
SF3A3-206ENST00000487062 OR4N4Q8N0Y3 316 aa6.67□□□□□ -1.34
SF3A3-206ENST00000487062 MMP21Q8N119 569 aa6.67□□□□□ -1.34
SF3A3-206ENST00000487062 AMER3Q8N944 861 aa6.67□□□□□ -1.34
SF3A3-206ENST00000487062 C11orf65Q8NCR3 313 aa6.67□□□□□ -1.34
SF3A3-206ENST00000487062 PAPD5Q8NDF8 572 aaKnown RBP6.67□□□□□ -1.34
SF3A3-206ENST00000487062 PNPT1Q8TCS8 783 aaKnown RBP6.67□□□□□ -1.34
SF3A3-206ENST00000487062 SFXN5Q8TD22 340 aa6.67□□□□□ -1.34
SF3A3-206ENST00000487062 LRTOMTQ8WZ04 291 aa6.67□□□□□ -1.34
SF3A3-206ENST00000487062 NCSTNQ92542 709 aa6.67□□□□□ -1.34
SF3A3-206ENST00000487062 PIGKQ92643 395 aa6.67□□□□□ -1.34
SF3A3-206ENST00000487062 N4BP2L2Q92802 583 aaPredicted RBP6.67□□□□□ -1.34
SF3A3-206ENST00000487062 SLCO4A1Q96BD0 722 aa6.67□□□□□ -1.34
SF3A3-206ENST00000487062 MOAP1Q96BY2 351 aa6.67□□□□□ -1.34
SF3A3-206ENST00000487062 ZC3H10Q96K80 434 aaKnown RBP6.67□□□□□ -1.34
SF3A3-206ENST00000487062 RNF145Q96MT1 663 aa6.67□□□□□ -1.34
SF3A3-206ENST00000487062 NECAB3Q96P71 396 aaPredicted RBP6.67□□□□□ -1.34
SF3A3-206ENST00000487062 SEPHS2Q99611 448 aa6.67□□□□□ -1.34
SF3A3-206ENST00000487062 ZNF184Q99676 751 aaPredicted RBP6.67□□□□□ -1.34
SF3A3-206ENST00000487062 MAP3K3Q99759 626 aa6.67□□□□□ -1.34
SF3A3-206ENST00000487062 PKP2Q99959 881 aa6.67□□□□□ -1.34
SF3A3-206ENST00000487062 MAPKAP1Q9BPZ7 522 aa6.67□□□□□ -1.34
SF3A3-206ENST00000487062 NPLQ9BXD5 320 aaPredicted RBP6.67□□□□□ -1.34
SF3A3-206ENST00000487062 CHRNA10Q9GZZ6 450 aa6.67□□□□□ -1.34
SF3A3-206ENST00000487062 ANKHQ9HCJ1 492 aa6.67□□□□□ -1.34
SF3A3-206ENST00000487062 LYRM4Q9HD34 91 aa6.67□□□□□ -1.34
SF3A3-206ENST00000487062 PDE7BQ9NP56 450 aa6.67□□□□□ -1.34
SF3A3-206ENST00000487062 SLC35C2Q9NQQ7 365 aa6.67□□□□□ -1.34
SF3A3-206ENST00000487062 SEMA3GQ9NS98 782 aa6.67□□□□□ -1.34
SF3A3-206ENST00000487062 DCAF13Q9NV06 445 aaKnown RBP6.67□□□□□ -1.34
SF3A3-206ENST00000487062 OLAHQ9NV23 265 aa6.67□□□□□ -1.34
SF3A3-206ENST00000487062 THUMPD1Q9NXG2 353 aaKnown RBP6.67□□□□□ -1.34
SF3A3-206ENST00000487062 RPS6KA6Q9UK32 745 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms