RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 LRRTM4Q86VH4 590 aa3.82□□□□□ -1.8
SNRNP40-205ENST00000486941 KMT5CQ86Y97 462 aa3.82□□□□□ -1.8
SNRNP40-205ENST00000486941 HPS6Q86YV9 775 aa3.82□□□□□ -1.8
SNRNP40-205ENST00000486941 ZNF547Q8IVP9 402 aa3.82□□□□□ -1.8
SNRNP40-205ENST00000486941 MAP7D3Q8IWC1 876 aa3.82□□□□□ -1.8
SNRNP40-205ENST00000486941 OR4N4Q8N0Y3 316 aa3.82□□□□□ -1.8
SNRNP40-205ENST00000486941 MYO1HQ8N1T3 1032 aa3.82□□□□□ -1.8
SNRNP40-205ENST00000486941 TRAM1L1Q8N609 369 aa3.82□□□□□ -1.8
SNRNP40-205ENST00000486941 SIDT2Q8NBJ9 832 aaKnown RBP3.82□□□□□ -1.8
SNRNP40-205ENST00000486941 NEXN-AS1Q8NBZ9 246 aa3.82□□□□□ -1.8
SNRNP40-205ENST00000486941 GPR26Q8NDV2 337 aa3.82□□□□□ -1.8
SNRNP40-205ENST00000486941 DTX3LQ8TDB6 740 aa3.82□□□□□ -1.8
SNRNP40-205ENST00000486941 BRSK1Q8TDC3 778 aa3.82□□□□□ -1.8
SNRNP40-205ENST00000486941 SSC4DQ8WTU2 575 aa3.82□□□□□ -1.8
SNRNP40-205ENST00000486941 CT55Q8WUE5 264 aa3.82□□□□□ -1.8
SNRNP40-205ENST00000486941 RSC1A1Q92681 617 aa3.82□□□□□ -1.8
SNRNP40-205ENST00000486941 GLYATL1Q969I3 302 aa3.82□□□□□ -1.8
SNRNP40-205ENST00000486941 FAF2Q96CS3 445 aa3.82□□□□□ -1.8
SNRNP40-205ENST00000486941 HDAC11Q96DB2 347 aa3.82□□□□□ -1.8
SNRNP40-205ENST00000486941 CXorf40BQ96DE9 158 aa3.82□□□□□ -1.8
SNRNP40-205ENST00000486941 SLC41A2Q96JW4 573 aa3.82□□□□□ -1.8
SNRNP40-205ENST00000486941 TGM7Q96PF1 710 aa3.82□□□□□ -1.8
SNRNP40-205ENST00000486941 ZNF670Q9BS34 389 aa3.82□□□□□ -1.8
SNRNP40-205ENST00000486941 SLC25A23Q9BV35 468 aa3.82□□□□□ -1.8
SNRNP40-205ENST00000486941 NUP85Q9BW27 656 aa3.82□□□□□ -1.8
SNRNP40-205ENST00000486941 BRD8Q9H0E9 1235 aa3.82□□□□□ -1.8
SNRNP40-205ENST00000486941 OSGEPL1Q9H4B0 414 aa3.82□□□□□ -1.8
SNRNP40-205ENST00000486941 ACTL8Q9H568 366 aa3.82□□□□□ -1.8
SNRNP40-205ENST00000486941 MAGEE1Q9HCI5 957 aa3.82□□□□□ -1.8
SNRNP40-205ENST00000486941 HIF1ANQ9NWT6 349 aa3.82□□□□□ -1.8
SNRNP40-205ENST00000486941 LNPEPQ9UIQ6 1025 aa3.82□□□□□ -1.8
SNRNP40-205ENST00000486941 RARRES3Q9UL19 164 aa3.82□□□□□ -1.8
SNRNP40-205ENST00000486941 TTLL3Q9Y4R7 772 aa3.82□□□□□ -1.8
SNRNP40-205ENST00000486941 PCDHGB1Q9Y5G3 927 aa3.82□□□□□ -1.8
SNRNP40-205ENST00000486941 BZW2Q9Y6E2 419 aaKnown RBP3.82□□□□□ -1.8
SNRNP40-205ENST00000486941 MYO7BQ6PIF6 2116 aa3.82□□□□□ -1.8
SNRNP40-205ENST00000486941 POLQO75417 2590 aa3.81□□□□□ -1.8
SNRNP40-205ENST00000486941 ABCA12Q86UK0 2595 aa3.81□□□□□ -1.8
SNRNP40-205ENST00000486941 IGHV5-51A0A0C4DH38 117 aa3.81□□□□□ -1.8
SNRNP40-205ENST00000486941 OR52A4PA6NMU1 304 aa3.81□□□□□ -1.8
SNRNP40-205ENST00000486941 ENO4A6NNW6 628 aa3.81□□□□□ -1.8
SNRNP40-205ENST00000486941 PRSS47A8MTI9 375 aa3.81□□□□□ -1.8
SNRNP40-205ENST00000486941 SMTNL1A8MU46 457 aa3.81□□□□□ -1.8
SNRNP40-205ENST00000486941 PDZK1P1A8MUH7 402 aa3.81□□□□□ -1.8
SNRNP40-205ENST00000486941 J3KTA2 159 aa3.81□□□□□ -1.8
SNRNP40-205ENST00000486941 DPM1O60762 260 aa3.81□□□□□ -1.8
SNRNP40-205ENST00000486941 SNRNP200O75643 2136 aaKnown RBP3.81□□□□□ -1.8
SNRNP40-205ENST00000486941 CEACAM4O75871 244 aa3.81□□□□□ -1.8
SNRNP40-205ENST00000486941 SORBS2O94875 1100 aaKnown RBP3.81□□□□□ -1.8
SNRNP40-205ENST00000486941 ZBTB11O95625 1053 aaPredicted RBP3.81□□□□□ -1.8
SNRNP40-205ENST00000486941 JCHAINP01591 159 aa3.81□□□□□ -1.8
SNRNP40-205ENST00000486941 FOLR1P15328 257 aa3.81□□□□□ -1.8
SNRNP40-205ENST00000486941 ARSBP15848 533 aa3.81□□□□□ -1.8
SNRNP40-205ENST00000486941 VCLP18206 1134 aa3.81□□□□□ -1.8
SNRNP40-205ENST00000486941 HMGCLP35914 325 aa3.81□□□□□ -1.8
SNRNP40-205ENST00000486941 CD86P42081 329 aa3.81□□□□□ -1.8
SNRNP40-205ENST00000486941 HALP42357 657 aa3.81□□□□□ -1.8
SNRNP40-205ENST00000486941 SSR1P43307 286 aaKnown RBP3.81□□□□□ -1.8
SNRNP40-205ENST00000486941 UQCRFS1P47985 274 aa3.81□□□□□ -1.8
SNRNP40-205ENST00000486941 CCL11P51671 97 aa3.81□□□□□ -1.8
SNRNP40-205ENST00000486941 DRG2P55039 364 aaKnown RBP3.81□□□□□ -1.8
SNRNP40-205ENST00000486941 TUBB4BP68371 445 aa3.81□□□□□ -1.8
SNRNP40-205ENST00000486941 IFI35P80217 286 aaPredicted RBP3.81□□□□□ -1.8
SNRNP40-205ENST00000486941 GBE1Q04446 702 aa3.81□□□□□ -1.8
SNRNP40-205ENST00000486941 CDK18Q07002 472 aa3.81□□□□□ -1.8
SNRNP40-205ENST00000486941 PPIDQ08752 370 aaKnown RBP3.81□□□□□ -1.8
SNRNP40-205ENST00000486941 DMPKQ09013 629 aa3.81□□□□□ -1.8
SNRNP40-205ENST00000486941 TMEM115Q12893 351 aaPredicted RBP3.81□□□□□ -1.8
SNRNP40-205ENST00000486941 TRAF3Q13114 568 aa3.81□□□□□ -1.8
SNRNP40-205ENST00000486941 TUBB2AQ13885 445 aa3.81□□□□□ -1.8
SNRNP40-205ENST00000486941 CHRNA6Q15825 494 aa3.81□□□□□ -1.8
SNRNP40-205ENST00000486941 NADK2Q4G0N4 442 aa3.81□□□□□ -1.8
SNRNP40-205ENST00000486941 IZUMO3Q5VZ72 239 aa3.81□□□□□ -1.8
SNRNP40-205ENST00000486941 ALS2CLQ60I27 953 aa3.81□□□□□ -1.8
SNRNP40-205ENST00000486941 CCDC70Q6NSX1 233 aa3.81□□□□□ -1.8
SNRNP40-205ENST00000486941 IRGCQ6NXR0 463 aa3.81□□□□□ -1.8
SNRNP40-205ENST00000486941 Q6ZSV7 163 aa3.81□□□□□ -1.8
SNRNP40-205ENST00000486941 FAM92BQ6ZTR7 304 aa3.81□□□□□ -1.8
SNRNP40-205ENST00000486941 C11orf96Q7Z7L8 435 aa3.81□□□□□ -1.8
SNRNP40-205ENST00000486941 NT5DC3Q86UY8 548 aa3.81□□□□□ -1.8
SNRNP40-205ENST00000486941 VSIG1Q86XK7 387 aa3.81□□□□□ -1.8
SNRNP40-205ENST00000486941 PQLC3Q8N755 202 aa3.81□□□□□ -1.8
SNRNP40-205ENST00000486941 KCTD6Q8NC69 237 aa3.81□□□□□ -1.8
SNRNP40-205ENST00000486941 CCNYQ8ND76 341 aa3.81□□□□□ -1.8
SNRNP40-205ENST00000486941 OR8K5Q8NH50 307 aa3.81□□□□□ -1.8
SNRNP40-205ENST00000486941 GABPB2Q8TAK5 448 aaPredicted RBP3.81□□□□□ -1.8
SNRNP40-205ENST00000486941 SYN2Q92777 582 aaPredicted RBP3.81□□□□□ -1.8
SNRNP40-205ENST00000486941 TADA1Q96BN2 335 aa3.81□□□□□ -1.8
SNRNP40-205ENST00000486941 IMP4Q96G21 291 aaKnown RBP3.81□□□□□ -1.8
SNRNP40-205ENST00000486941 ELMO2Q96JJ3 720 aa3.81□□□□□ -1.8
SNRNP40-205ENST00000486941 ZNF514Q96K75 400 aaPredicted RBP3.81□□□□□ -1.8
SNRNP40-205ENST00000486941 ZNF830Q96NB3 372 aaPredicted RBP3.81□□□□□ -1.8
SNRNP40-205ENST00000486941 LRFN5Q96NI6 719 aa3.81□□□□□ -1.8
SNRNP40-205ENST00000486941 VPS35Q96QK1 796 aa3.81□□□□□ -1.8
SNRNP40-205ENST00000486941 TRIB3Q96RU7 358 aa3.81□□□□□ -1.8
SNRNP40-205ENST00000486941 CD180Q99467 661 aa3.81□□□□□ -1.8
SNRNP40-205ENST00000486941 BPIFA3Q9BQP9 254 aa3.81□□□□□ -1.8
SNRNP40-205ENST00000486941 TUBB2BQ9BVA1 445 aa3.81□□□□□ -1.8
SNRNP40-205ENST00000486941 GPR63Q9BZJ6 419 aa3.81□□□□□ -1.8
SNRNP40-205ENST00000486941 NAT10Q9H0A0 1025 aaKnown RBP3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms