RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 DYNC2LI1Q8TCX1 351 aa17.1■□□□□ 0.33
PDLIM7-207ENST00000486828 COX4I2Q96KJ9 171 aa17.1■□□□□ 0.33
PDLIM7-207ENST00000486828 NKX2-4Q9H2Z4 354 aa17.1■□□□□ 0.33
PDLIM7-207ENST00000486828 MBNL1Q9NR56 388 aaKnown RBP17.1■□□□□ 0.33
PDLIM7-207ENST00000486828 GDE1Q9NZC3 331 aa17.1■□□□□ 0.33
PDLIM7-207ENST00000486828 ENOPH1Q9UHY7 261 aa17.1■□□□□ 0.33
PDLIM7-207ENST00000486828 ACSL5Q9ULC5 683 aa17.1■□□□□ 0.33
PDLIM7-207ENST00000486828 ERGIC3Q9Y282 383 aa17.1■□□□□ 0.33
PDLIM7-207ENST00000486828 C5orf58C9J3I9 102 aa17.09■□□□□ 0.33
PDLIM7-207ENST00000486828 NDUFS4O43181 175 aa17.09■□□□□ 0.33
PDLIM7-207ENST00000486828 CBFA2T3O75081 653 aa17.09■□□□□ 0.33
PDLIM7-207ENST00000486828 KAT7O95251 611 aa17.09■□□□□ 0.33
PDLIM7-207ENST00000486828 BCHEP06276 602 aa17.09■□□□□ 0.33
PDLIM7-207ENST00000486828 CDK1P06493 297 aa17.09■□□□□ 0.33
PDLIM7-207ENST00000486828 CD36P16671 472 aa17.09■□□□□ 0.33
PDLIM7-207ENST00000486828 CBLP22681 906 aa17.09■□□□□ 0.33
PDLIM7-207ENST00000486828 IDUAP35475 653 aa17.09■□□□□ 0.33
PDLIM7-207ENST00000486828 GRK3P35626 688 aa17.09■□□□□ 0.33
PDLIM7-207ENST00000486828 RPS26P62854 115 aaKnown RBP17.09■□□□□ 0.33
PDLIM7-207ENST00000486828 RUNX3Q13761 415 aa17.09■□□□□ 0.33
PDLIM7-207ENST00000486828 GANABQ14697 944 aaKnown RBP17.09■□□□□ 0.33
PDLIM7-207ENST00000486828 AGERQ15109 404 aa17.09■□□□□ 0.33
PDLIM7-207ENST00000486828 PPP2R2DQ66LE6 453 aa17.09■□□□□ 0.33
PDLIM7-207ENST00000486828 TNFAIP8L2Q6P589 184 aaPredicted RBP17.09■□□□□ 0.33
PDLIM7-207ENST00000486828 VITQ6UXI7 678 aa17.09■□□□□ 0.33
PDLIM7-207ENST00000486828 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.09■□□□□ 0.33
PDLIM7-207ENST00000486828 DCDC5Q6ZRR9 648 aa17.09■□□□□ 0.33
PDLIM7-207ENST00000486828 CACUL1Q86Y37 369 aa17.09■□□□□ 0.33
PDLIM7-207ENST00000486828 RAB42Q8N4Z0 105 aa17.09■□□□□ 0.33
PDLIM7-207ENST00000486828 TMCO5AQ8N6Q1 288 aa17.09■□□□□ 0.33
PDLIM7-207ENST00000486828 LINC01555Q8NAE3 123 aa17.09■□□□□ 0.33
PDLIM7-207ENST00000486828 PHF10Q8WUB8 498 aaKnown RBP17.09■□□□□ 0.33
PDLIM7-207ENST00000486828 CHPT1Q8WUD6 406 aa17.09■□□□□ 0.33
PDLIM7-207ENST00000486828 SLC38A5Q8WUX1 472 aa17.09■□□□□ 0.33
PDLIM7-207ENST00000486828 APOBEC4Q8WW27 367 aaKnown RBP17.09■□□□□ 0.33
PDLIM7-207ENST00000486828 PROX1Q92786 737 aa17.09■□□□□ 0.33
PDLIM7-207ENST00000486828 GGHQ92820 318 aa17.09■□□□□ 0.33
PDLIM7-207ENST00000486828 RGMAQ96B86 450 aa17.09■□□□□ 0.33
PDLIM7-207ENST00000486828 WDR12Q9GZL7 423 aaKnown RBP17.09■□□□□ 0.33
PDLIM7-207ENST00000486828 HMG20AQ9NP66 347 aa17.09■□□□□ 0.33
PDLIM7-207ENST00000486828 AKIP1Q9NQ31 210 aa17.09■□□□□ 0.33
PDLIM7-207ENST00000486828 KCND3Q9UK17 655 aa17.09■□□□□ 0.33
PDLIM7-207ENST00000486828 ADAM29Q9UKF5 820 aa17.09■□□□□ 0.33
PDLIM7-207ENST00000486828 PLXND1Q9Y4D7 1925 aa17.09■□□□□ 0.33
PDLIM7-207ENST00000486828 OR1F1O43749 312 aa17.09■□□□□ 0.33
PDLIM7-207ENST00000486828 TMPRSS11DO60235 418 aa17.09■□□□□ 0.33
PDLIM7-207ENST00000486828 SULT1C4O75897 302 aa17.09■□□□□ 0.33
PDLIM7-207ENST00000486828 NADKO95544 446 aaPredicted RBP17.09■□□□□ 0.33
PDLIM7-207ENST00000486828 SLC19A1P41440 591 aa17.09■□□□□ 0.33
PDLIM7-207ENST00000486828 SERPINB10P48595 397 aa17.09■□□□□ 0.33
PDLIM7-207ENST00000486828 NCS1P62166 190 aa17.09■□□□□ 0.33
PDLIM7-207ENST00000486828 DMPKQ09013 629 aa17.09■□□□□ 0.33
PDLIM7-207ENST00000486828 HSPB3Q12988 150 aa17.09■□□□□ 0.33
PDLIM7-207ENST00000486828 PUM1Q14671 1186 aaKnown RBP eCLIP17.09■□□□□ 0.332e-7■□□□□ 10.8
PDLIM7-207ENST00000486828 CST6Q15828 149 aa17.09■□□□□ 0.33
PDLIM7-207ENST00000486828 RPS26P11Q5JNZ5 115 aaPredicted RBP17.09■□□□□ 0.33
PDLIM7-207ENST00000486828 UTP15Q8TED0 518 aaKnown RBP17.09■□□□□ 0.33
PDLIM7-207ENST00000486828 S100ZQ8WXG8 99 aa17.09■□□□□ 0.33
PDLIM7-207ENST00000486828 SLC38A4Q969I6 547 aa17.09■□□□□ 0.33
PDLIM7-207ENST00000486828 WDR26Q9H7D7 661 aa17.09■□□□□ 0.33
PDLIM7-207ENST00000486828 CERS4Q9HA82 394 aa17.09■□□□□ 0.33
PDLIM7-207ENST00000486828 SIRT3Q9NTG7 399 aaPredicted RBP17.09■□□□□ 0.33
PDLIM7-207ENST00000486828 OR1A2Q9Y585 309 aa17.09■□□□□ 0.33
PDLIM7-207ENST00000486828 STON1Q9Y6Q2 735 aa17.09■□□□□ 0.33
PDLIM7-207ENST00000486828 FUT4P22083 530 aa17.08■□□□□ 0.33
PDLIM7-207ENST00000486828 TEAD1P28347 426 aa17.08■□□□□ 0.33
PDLIM7-207ENST00000486828 C21orf33P30042 268 aaPredicted RBP17.08■□□□□ 0.33
PDLIM7-207ENST00000486828 CSNK1G2P78368 415 aa17.08■□□□□ 0.33
PDLIM7-207ENST00000486828 DUSP6Q16828 381 aa17.08■□□□□ 0.33
PDLIM7-207ENST00000486828 C6orf120Q7Z4R8 191 aa17.08■□□□□ 0.33
PDLIM7-207ENST00000486828 UBE3DQ7Z6J8 389 aa17.08■□□□□ 0.33
PDLIM7-207ENST00000486828 CENPSQ8N2Z9 138 aa17.08■□□□□ 0.33
PDLIM7-207ENST00000486828 GTPBP3Q969Y2 492 aaKnown RBP17.08■□□□□ 0.33
PDLIM7-207ENST00000486828 LGALS12Q96DT0 336 aa17.08■□□□□ 0.33
PDLIM7-207ENST00000486828 ZBED6CLQ96FA7 236 aaPredicted RBP17.08■□□□□ 0.33
PDLIM7-207ENST00000486828 TMEM19Q96HH6 336 aa17.08■□□□□ 0.33
PDLIM7-207ENST00000486828 ALPK1Q96QP1 1244 aa17.08■□□□□ 0.33
PDLIM7-207ENST00000486828 FERD3LQ96RJ6 166 aa17.08■□□□□ 0.33
PDLIM7-207ENST00000486828 MAPKAP1Q9BPZ7 522 aa17.08■□□□□ 0.33
PDLIM7-207ENST00000486828 RSPH9Q9H1X1 276 aaPredicted RBP17.08■□□□□ 0.33
PDLIM7-207ENST00000486828 SLC28A3Q9HAS3 691 aa17.08■□□□□ 0.33
PDLIM7-207ENST00000486828 C5AR2Q9P296 337 aa17.08■□□□□ 0.33
PDLIM7-207ENST00000486828 WDR37Q9Y2I8 494 aa17.08■□□□□ 0.33
PDLIM7-207ENST00000486828 TOR1BO14657 336 aa17.08■□□□□ 0.32
PDLIM7-207ENST00000486828 B4GALT2O60909 372 aa17.08■□□□□ 0.32
PDLIM7-207ENST00000486828 MFN2O95140 757 aa17.08■□□□□ 0.32
PDLIM7-207ENST00000486828 TRIM23P36406 574 aa17.08■□□□□ 0.32
PDLIM7-207ENST00000486828 ITGADQ13349 1161 aa17.08■□□□□ 0.32
PDLIM7-207ENST00000486828 IRF4Q15306 451 aa17.08■□□□□ 0.32
PDLIM7-207ENST00000486828 RGS21Q2M5E4 152 aa17.08■□□□□ 0.32
PDLIM7-207ENST00000486828 SPDYE7PQ495Y7 208 aa17.08■□□□□ 0.32
PDLIM7-207ENST00000486828 COLEC12Q5KU26 742 aa17.08■□□□□ 0.32
PDLIM7-207ENST00000486828 KIAA1161Q6NSJ0 714 aa17.08■□□□□ 0.32
PDLIM7-207ENST00000486828 ZNF554Q86TJ5 538 aa17.08■□□□□ 0.32
PDLIM7-207ENST00000486828 ADCK1Q86TW2 530 aa17.08■□□□□ 0.32
PDLIM7-207ENST00000486828 AQP11Q8NBQ7 271 aa17.08■□□□□ 0.32
PDLIM7-207ENST00000486828 RPL3LQ92901 407 aaKnown RBP17.08■□□□□ 0.32
PDLIM7-207ENST00000486828 EXOSC8Q96B26 276 aaKnown RBP17.08■□□□□ 0.32
PDLIM7-207ENST00000486828 CHFRQ96EP1 664 aa17.08■□□□□ 0.32
PDLIM7-207ENST00000486828 C12orf66Q96MD2 445 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms