RNA–Protein interactions for RNA: ENST00000486720.1

APH1A-208, Transcript of aph-1 homolog A, gamma-secretase subunit, humanhuman

TSL 2

Gene APH1A, Length 447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1A-208ENST00000486720 IKBIPQ70UQ0 350 aa13.78□□□□□ -0.2
APH1A-208ENST00000486720 MRGPREQ86SM8 312 aa13.78□□□□□ -0.2
APH1A-208ENST00000486720 SHISA5Q8N114 240 aa13.78□□□□□ -0.2
APH1A-208ENST00000486720 TMEM132CQ8N3T6 1108 aa13.78□□□□□ -0.2
APH1A-208ENST00000486720 C16orf78Q8WTQ4 265 aa13.78□□□□□ -0.2
APH1A-208ENST00000486720 SNRNP27Q8WVK2 155 aaKnown RBP13.78□□□□□ -0.2
APH1A-208ENST00000486720 PPP1R36Q96LQ0 422 aa13.78□□□□□ -0.2
APH1A-208ENST00000486720 SIKE1Q9BRV8 207 aa13.78□□□□□ -0.2
APH1A-208ENST00000486720 AKTIPQ9H8T0 292 aa13.78□□□□□ -0.2
APH1A-208ENST00000486720 CPNE5Q9HCH3 593 aa13.78□□□□□ -0.2
APH1A-208ENST00000486720 MYNNQ9NPC7 610 aa13.78□□□□□ -0.2
APH1A-208ENST00000486720 TEX10Q9NXF1 929 aaPredicted RBP13.78□□□□□ -0.2
APH1A-208ENST00000486720 PSME2Q9UL46 239 aa13.78□□□□□ -0.2
APH1A-208ENST00000486720 DLGAP4Q9Y2H0 992 aa13.78□□□□□ -0.2
APH1A-208ENST00000486720 PCDHA9Q9Y5H5 950 aa13.78□□□□□ -0.2
APH1A-208ENST00000486720 HS3ST3B1Q9Y662 390 aa13.78□□□□□ -0.2
APH1A-208ENST00000486720 SEC16AO15027 2179 aa13.78□□□□□ -0.2
APH1A-208ENST00000486720 LOC102723996A0A087X1L8 192 aa13.77□□□□□ -0.21
APH1A-208ENST00000486720 IGKV3D-11A0A0A0MRZ8 115 aa13.77□□□□□ -0.21
APH1A-208ENST00000486720 A0A1W2PQ72 361 aa13.77□□□□□ -0.21
APH1A-208ENST00000486720 TCRBV16S1A1N1A0A5B0 115 aa13.77□□□□□ -0.21
APH1A-208ENST00000486720 SDHDO14521 159 aa13.77□□□□□ -0.21
APH1A-208ENST00000486720 APC2O95996 2303 aa13.77□□□□□ -0.21
APH1A-208ENST00000486720 PRR35P0CG20 571 aa13.77□□□□□ -0.21
APH1A-208ENST00000486720 DDX5P17844 614 aaKnown RBP13.77□□□□□ -0.21
APH1A-208ENST00000486720 MAOAP21397 527 aa13.77□□□□□ -0.21
APH1A-208ENST00000486720 HNRNPFP52597 415 aaKnown RBP13.77□□□□□ -0.21
APH1A-208ENST00000486720 RRADP55042 308 aa13.77□□□□□ -0.21
APH1A-208ENST00000486720 ERVK-8P63133 956 aa13.77□□□□□ -0.21
APH1A-208ENST00000486720 CXADRP78310 365 aa13.77□□□□□ -0.21
APH1A-208ENST00000486720 BTG2P78543 158 aa13.77□□□□□ -0.21
APH1A-208ENST00000486720 FAAH2Q6GMR7 532 aa13.77□□□□□ -0.21
APH1A-208ENST00000486720 ANKRD37Q7Z713 158 aa13.77□□□□□ -0.21
APH1A-208ENST00000486720 FAM9CQ8IZT9 166 aa13.77□□□□□ -0.21
APH1A-208ENST00000486720 TMEM52Q8NDY8 209 aa13.77□□□□□ -0.21
APH1A-208ENST00000486720 CDC26Q8NHZ8 85 aa13.77□□□□□ -0.21
APH1A-208ENST00000486720 FER1L6-AS2Q96M78 137 aa13.77□□□□□ -0.21
APH1A-208ENST00000486720 P4HTMQ9NXG6 502 aa13.77□□□□□ -0.21
APH1A-208ENST00000486720 ASIC5Q9NY37 505 aa13.77□□□□□ -0.21
APH1A-208ENST00000486720 NOP53Q9NZM5 478 aaKnown RBP13.77□□□□□ -0.21
APH1A-208ENST00000486720 EHD3Q9NZN3 535 aa13.77□□□□□ -0.21
APH1A-208ENST00000486720 MAN2B2Q9Y2E5 1009 aa13.77□□□□□ -0.21
APH1A-208ENST00000486720 NUP210LQ5VU65 1888 aa13.76□□□□□ -0.21
APH1A-208ENST00000486720 SOCS6O14544 535 aa13.76□□□□□ -0.21
APH1A-208ENST00000486720 GPR75O95800 540 aa13.76□□□□□ -0.21
APH1A-208ENST00000486720 VIMP08670 466 aaKnown RBP13.76□□□□□ -0.21
APH1A-208ENST00000486720 IL3P08700 152 aa13.76□□□□□ -0.21
APH1A-208ENST00000486720 BCKDHAP12694 445 aa13.76□□□□□ -0.21
APH1A-208ENST00000486720 ALOX15P16050 662 aaPredicted RBP13.76□□□□□ -0.21
APH1A-208ENST00000486720 SDC1P18827 310 aa13.76□□□□□ -0.21
APH1A-208ENST00000486720 ALDH9A1P49189 494 aa13.76□□□□□ -0.21
APH1A-208ENST00000486720 OR4D2P58180 307 aa13.76□□□□□ -0.21
APH1A-208ENST00000486720 ACTN3Q08043 901 aaPredicted RBP13.76□□□□□ -0.21
APH1A-208ENST00000486720 C2orf80Q0P641 193 aa13.76□□□□□ -0.21
APH1A-208ENST00000486720 ATP1A4Q13733 1029 aa13.76□□□□□ -0.21
APH1A-208ENST00000486720 IL23RQ5VWK5 629 aa13.76□□□□□ -0.21
APH1A-208ENST00000486720 OGFOD2Q6N063 350 aa13.76□□□□□ -0.21
APH1A-208ENST00000486720 SLC48A1Q6P1K1 146 aa13.76□□□□□ -0.21
APH1A-208ENST00000486720 KIRREL2Q6UWL6 708 aa13.76□□□□□ -0.21
APH1A-208ENST00000486720 ACAD11Q709F0 780 aa13.76□□□□□ -0.21
APH1A-208ENST00000486720 LARP4Q71RC2 724 aaKnown RBP eCLIP13.76□□□□□ -0.21
APH1A-208ENST00000486720 NDUFAF7Q7L592 441 aa13.76□□□□□ -0.21
APH1A-208ENST00000486720 SPATA19Q7Z5L4 167 aa13.76□□□□□ -0.21
APH1A-208ENST00000486720 CPEB2Q7Z5Q1 589 aaKnown RBP13.76□□□□□ -0.21
APH1A-208ENST00000486720 CLNKQ7Z7G1 428 aa13.76□□□□□ -0.21
APH1A-208ENST00000486720 TMEM151BQ8IW70 566 aa13.76□□□□□ -0.21
APH1A-208ENST00000486720 SAMD14Q8IZD0 417 aaPredicted RBP13.76□□□□□ -0.21
APH1A-208ENST00000486720 TMEM102Q8N9M5 508 aaPredicted RBP13.76□□□□□ -0.21
APH1A-208ENST00000486720 OR11G2Q8NGC1 345 aa13.76□□□□□ -0.21
APH1A-208ENST00000486720 OR4K14Q8NGD5 310 aa13.76□□□□□ -0.21
APH1A-208ENST00000486720 DNAJB14Q8TBM8 379 aa13.76□□□□□ -0.21
APH1A-208ENST00000486720 ACTRT2Q8TDY3 377 aa13.76□□□□□ -0.21
APH1A-208ENST00000486720 TSLPQ969D9 159 aa13.76□□□□□ -0.21
APH1A-208ENST00000486720 MAELQ96JY0 434 aaKnown RBP13.76□□□□□ -0.21
APH1A-208ENST00000486720 PELOQ9BRX2 385 aaKnown RBP13.76□□□□□ -0.21
APH1A-208ENST00000486720 ZNF700Q9H0M5 742 aa13.76□□□□□ -0.21
APH1A-208ENST00000486720 MIEF1Q9NQG6 463 aa13.76□□□□□ -0.21
APH1A-208ENST00000486720 NECTIN3Q9NQS3 549 aa13.76□□□□□ -0.21
APH1A-208ENST00000486720 GIMAP2Q9UG22 337 aa13.76□□□□□ -0.21
APH1A-208ENST00000486720 MAPRE3Q9UPY8 281 aa13.76□□□□□ -0.21
APH1A-208ENST00000486720 URB1O60287 2271 aaKnown RBP13.75□□□□□ -0.21
APH1A-208ENST00000486720 NSG1A0A0A6YYJ2 146 aa13.75□□□□□ -0.21
APH1A-208ENST00000486720 OR2W5A6NFC9 320 aa13.75□□□□□ -0.21
APH1A-208ENST00000486720 GLOD5A6NK44 160 aa13.75□□□□□ -0.21
APH1A-208ENST00000486720 ZNF195O14628 629 aa13.75□□□□□ -0.21
APH1A-208ENST00000486720 FGF17O60258 216 aa13.75□□□□□ -0.21
APH1A-208ENST00000486720 DIAPH2O60879 1101 aa13.75□□□□□ -0.21
APH1A-208ENST00000486720 LDB3O75112 727 aa13.75□□□□□ -0.21
APH1A-208ENST00000486720 PRKRAO75569 313 aaKnown RBP13.75□□□□□ -0.21
APH1A-208ENST00000486720 HPP00738 406 aa13.75□□□□□ -0.21
APH1A-208ENST00000486720 FURINP09958 794 aa13.75□□□□□ -0.21
APH1A-208ENST00000486720 TROVE2P10155 538 aaKnown RBP eCLIP13.75□□□□□ -0.21
APH1A-208ENST00000486720 COX7A2P14406 83 aa13.75□□□□□ -0.21
APH1A-208ENST00000486720 DDCP20711 480 aa13.75□□□□□ -0.21
APH1A-208ENST00000486720 PIK3R1P27986 724 aa13.75□□□□□ -0.21
APH1A-208ENST00000486720 EPHA3P29320 983 aa13.75□□□□□ -0.21
APH1A-208ENST00000486720 RPL3P39023 403 aaKnown RBP13.75□□□□□ -0.21
APH1A-208ENST00000486720 EFNA3P52797 238 aa13.75□□□□□ -0.21
APH1A-208ENST00000486720 AP2B1P63010 937 aa13.75□□□□□ -0.21
APH1A-208ENST00000486720 IGLV3-21P80748 117 aaPredicted RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms