RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 ALPK2Q86TB3 2170 aa13.83□□□□□ -0.2
U2AF1-211ENST00000486519 IGHV4-30-2A0A087WSY4 118 aa13.82□□□□□ -0.2
U2AF1-211ENST00000486519 A0A1W2PNV4 684 aa13.82□□□□□ -0.2
U2AF1-211ENST00000486519 HS3ST1O14792 307 aa13.82□□□□□ -0.2
U2AF1-211ENST00000486519 IFNA16P05015 189 aa13.82□□□□□ -0.2
U2AF1-211ENST00000486519 HPNP05981 417 aa13.82□□□□□ -0.2
U2AF1-211ENST00000486519 THBS1P07996 1170 aa13.82□□□□□ -0.2
U2AF1-211ENST00000486519 SOD3P08294 240 aa13.82□□□□□ -0.2
U2AF1-211ENST00000486519 NPPBP16860 134 aa13.82□□□□□ -0.2
U2AF1-211ENST00000486519 NMBRP28336 390 aa13.82□□□□□ -0.2
U2AF1-211ENST00000486519 IDUAP35475 653 aa13.82□□□□□ -0.2
U2AF1-211ENST00000486519 CD79BP40259 229 aa13.82□□□□□ -0.2
U2AF1-211ENST00000486519 NAE1Q13564 534 aa13.82□□□□□ -0.2
U2AF1-211ENST00000486519 TMEM249Q2WGJ8 235 aa13.82□□□□□ -0.2
U2AF1-211ENST00000486519 FAM174BQ3ZCQ3 159 aa13.82□□□□□ -0.2
U2AF1-211ENST00000486519 NHSL2Q5HYW2 709 aa13.82□□□□□ -0.2
U2AF1-211ENST00000486519 PIWIL4Q7Z3Z4 852 aaKnown RBP13.82□□□□□ -0.2
U2AF1-211ENST00000486519 MEX3DQ86XN8 651 aaKnown RBP13.82□□□□□ -0.2
U2AF1-211ENST00000486519 RHOT2Q8IXI1 618 aa13.82□□□□□ -0.2
U2AF1-211ENST00000486519 C9orf40Q8IXQ3 194 aa13.82□□□□□ -0.2
U2AF1-211ENST00000486519 ZNF611Q8N823 705 aa13.82□□□□□ -0.2
U2AF1-211ENST00000486519 FAM13CQ8NE31 585 aa13.82□□□□□ -0.2
U2AF1-211ENST00000486519 OR4K1Q8NGD4 311 aa13.82□□□□□ -0.2
U2AF1-211ENST00000486519 DOK4Q8TEW6 326 aa13.82□□□□□ -0.2
U2AF1-211ENST00000486519 ZNF721Q8TF20 911 aa13.82□□□□□ -0.2
U2AF1-211ENST00000486519 ABTB1Q969K4 478 aaPredicted RBP13.82□□□□□ -0.2
U2AF1-211ENST00000486519 SPACA9Q96E40 222 aaPredicted RBP13.82□□□□□ -0.2
U2AF1-211ENST00000486519 ART5Q96L15 291 aa13.82□□□□□ -0.2
U2AF1-211ENST00000486519 GNRHR2Q96P88 292 aa13.82□□□□□ -0.2
U2AF1-211ENST00000486519 DOHHQ9BU89 302 aa13.82□□□□□ -0.2
U2AF1-211ENST00000486519 PIGMQ9H3S5 423 aa13.82□□□□□ -0.2
U2AF1-211ENST00000486519 TREX1Q9NSU2 369 aa13.82□□□□□ -0.2
U2AF1-211ENST00000486519 ADAMTS6Q9UKP5 1117 aa13.82□□□□□ -0.2
U2AF1-211ENST00000486519 CLCA3PQ9Y6N3 262 aa13.82□□□□□ -0.2
U2AF1-211ENST00000486519 PRKDCP78527 4128 aaKnown RBP13.82□□□□□ -0.2
U2AF1-211ENST00000486519 HRKO00198 91 aa13.81□□□□□ -0.2
U2AF1-211ENST00000486519 ZNF16P17020 682 aaPredicted RBP13.81□□□□□ -0.2
U2AF1-211ENST00000486519 IGFBP5P24593 272 aa13.81□□□□□ -0.2
U2AF1-211ENST00000486519 RPS4XP62701 263 aaKnown RBP13.81□□□□□ -0.2
U2AF1-211ENST00000486519 BTN3A2P78410 334 aa13.81□□□□□ -0.2
U2AF1-211ENST00000486519 SRYQ05066 204 aa13.81□□□□□ -0.2
U2AF1-211ENST00000486519 TOR1AIP1Q5JTV8 583 aa13.81□□□□□ -0.2
U2AF1-211ENST00000486519 CES3Q6UWW8 571 aa13.81□□□□□ -0.2
U2AF1-211ENST00000486519 TMEM64Q6YI46 380 aa13.81□□□□□ -0.2
U2AF1-211ENST00000486519 YRDCQ86U90 279 aaKnown RBP13.81□□□□□ -0.2
U2AF1-211ENST00000486519 TMEM132CQ8N3T6 1108 aa13.81□□□□□ -0.2
U2AF1-211ENST00000486519 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.81□□□□□ -0.2
U2AF1-211ENST00000486519 ABHD11Q8NFV4 315 aa13.81□□□□□ -0.2
U2AF1-211ENST00000486519 LILRB1Q8NHL6 650 aaPredicted RBP13.81□□□□□ -0.2
U2AF1-211ENST00000486519 ZPLD1Q8TCW7 415 aa13.81□□□□□ -0.2
U2AF1-211ENST00000486519 PYCR2Q96C36 320 aa13.81□□□□□ -0.2
U2AF1-211ENST00000486519 STARD4Q96DR4 205 aa13.81□□□□□ -0.2
U2AF1-211ENST00000486519 OR4K3Q96R72 315 aa13.81□□□□□ -0.2
U2AF1-211ENST00000486519 PANX2Q96RD6 677 aa13.81□□□□□ -0.2
U2AF1-211ENST00000486519 SGPP1Q9BX95 441 aa13.81□□□□□ -0.2
U2AF1-211ENST00000486519 FAM129AQ9BZQ8 928 aa13.81□□□□□ -0.2
U2AF1-211ENST00000486519 SHARPINQ9H0F6 387 aa13.81□□□□□ -0.2
U2AF1-211ENST00000486519 ESRP2Q9H6T0 727 aaKnown RBP13.81□□□□□ -0.2
U2AF1-211ENST00000486519 TMEM160Q9NX00 188 aa13.81□□□□□ -0.2
U2AF1-211ENST00000486519 CLCF1Q9UBD9 225 aa13.81□□□□□ -0.2
U2AF1-211ENST00000486519 TRBC2A0A5B9 178 aa13.8□□□□□ -0.2
U2AF1-211ENST00000486519 LRRC14BA6NHZ5 514 aa13.8□□□□□ -0.2
U2AF1-211ENST00000486519 TGM6O95932 706 aa13.8□□□□□ -0.2
U2AF1-211ENST00000486519 CYP4B1P13584 511 aa13.8□□□□□ -0.2
U2AF1-211ENST00000486519 SRD5A1P18405 259 aa13.8□□□□□ -0.2
U2AF1-211ENST00000486519 GRK3P35626 688 aa13.8□□□□□ -0.2
U2AF1-211ENST00000486519 SCTRP47872 440 aa13.8□□□□□ -0.2
U2AF1-211ENST00000486519 DIO3P55073 304 aa13.8□□□□□ -0.2
U2AF1-211ENST00000486519 ID2Q02363 134 aa13.8□□□□□ -0.2
U2AF1-211ENST00000486519 RGS1Q08116 209 aa13.8□□□□□ -0.2
U2AF1-211ENST00000486519 RCAN2Q14206 197 aa13.8□□□□□ -0.2
U2AF1-211ENST00000486519 MPEG1Q2M385 716 aa13.8□□□□□ -0.2
U2AF1-211ENST00000486519 AGTRAPQ6RW13 159 aa13.8□□□□□ -0.2
U2AF1-211ENST00000486519 SASS6Q6UVJ0 657 aa13.8□□□□□ -0.2
U2AF1-211ENST00000486519 LCTLQ6UWM7 567 aa13.8□□□□□ -0.2
U2AF1-211ENST00000486519 C12orf54Q6X4T0 127 aa13.8□□□□□ -0.2
U2AF1-211ENST00000486519 SH2D5Q6ZV89 423 aa13.8□□□□□ -0.2
U2AF1-211ENST00000486519 UBE2R2Q712K3 238 aaPredicted RBP13.8□□□□□ -0.2
U2AF1-211ENST00000486519 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.8□□□□□ -0.2
U2AF1-211ENST00000486519 PRUNE1Q86TP1 453 aa13.8□□□□□ -0.2
U2AF1-211ENST00000486519 OTUD6BQ8N6M0 293 aa13.8□□□□□ -0.2
U2AF1-211ENST00000486519 MORN4Q8NDC4 146 aa13.8□□□□□ -0.2
U2AF1-211ENST00000486519 OR8K3Q8NH51 312 aa13.8□□□□□ -0.2
U2AF1-211ENST00000486519 ATL1Q8WXF7 558 aa13.8□□□□□ -0.2
U2AF1-211ENST00000486519 AKAP1Q92667 903 aaKnown RBP eCLIP13.8□□□□□ -0.2
U2AF1-211ENST00000486519 ZNF597Q96LX8 424 aa13.8□□□□□ -0.2
U2AF1-211ENST00000486519 RUNDC3BQ96NL0 473 aa13.8□□□□□ -0.2
U2AF1-211ENST00000486519 OSBPL8Q9BZF1 889 aa13.8□□□□□ -0.2
U2AF1-211ENST00000486519 RBSNQ9H1K0 784 aa13.8□□□□□ -0.2
U2AF1-211ENST00000486519 ETNK1Q9HBU6 452 aa13.8□□□□□ -0.2
U2AF1-211ENST00000486519 ZFP69BQ9UJL9 534 aa13.8□□□□□ -0.2
U2AF1-211ENST00000486519 AMFRQ9UKV5 643 aa13.8□□□□□ -0.2
U2AF1-211ENST00000486519 TFR2Q9UP52 801 aa13.8□□□□□ -0.2
U2AF1-211ENST00000486519 C17orf105B2RV13 164 aa13.79□□□□□ -0.2
U2AF1-211ENST00000486519 MSTNO14793 375 aa13.79□□□□□ -0.2
U2AF1-211ENST00000486519 PGRP06401 933 aa13.79□□□□□ -0.2
U2AF1-211ENST00000486519 CASP9P55211 416 aa13.79□□□□□ -0.2
U2AF1-211ENST00000486519 HSD17B7P56937 341 aa13.79□□□□□ -0.2
U2AF1-211ENST00000486519 SKP1P63208 163 aa13.79□□□□□ -0.2
U2AF1-211ENST00000486519 SF3B4Q15427 424 aaKnown RBP eCLIP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms