RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 PPM1NQ8N819 430 aa7.51□□□□□ -1.21
XRN1-212ENST00000486211 PPHLN1Q8NEY8 458 aaKnown RBP7.51□□□□□ -1.21
XRN1-212ENST00000486211 GSDMBQ8TAX9 411 aa7.51□□□□□ -1.21
XRN1-212ENST00000486211 ZPLD1Q8TCW7 415 aa7.51□□□□□ -1.21
XRN1-212ENST00000486211 PAQR8Q8TEZ7 354 aa7.51□□□□□ -1.21
XRN1-212ENST00000486211 P3H4Q92791 437 aa7.51□□□□□ -1.21
XRN1-212ENST00000486211 INTS12Q96CB8 462 aaKnown RBP7.51□□□□□ -1.21
XRN1-212ENST00000486211 TNFRSF13CQ96RJ3 184 aa7.51□□□□□ -1.21
XRN1-212ENST00000486211 TMEM204Q9BSN7 226 aa7.51□□□□□ -1.21
XRN1-212ENST00000486211 UGT2B28Q9BY64 529 aa7.51□□□□□ -1.21
XRN1-212ENST00000486211 P2RY12Q9H244 342 aa7.51□□□□□ -1.21
XRN1-212ENST00000486211 HSD3B7Q9H2F3 369 aa7.51□□□□□ -1.21
XRN1-212ENST00000486211 ABCF3Q9NUQ8 709 aa7.51□□□□□ -1.21
XRN1-212ENST00000486211 SLC2A6Q9UGQ3 507 aa7.51□□□□□ -1.21
XRN1-212ENST00000486211 SLC6A5Q9Y345 797 aa7.51□□□□□ -1.21
XRN1-212ENST00000486211 TRRAPQ9Y4A5 3859 aa7.51□□□□□ -1.21
XRN1-212ENST00000486211 MED12Q93074 2177 aa7.5□□□□□ -1.21
XRN1-212ENST00000486211 IGHV4-30-2A0A087WSY4 118 aa7.5□□□□□ -1.21
XRN1-212ENST00000486211 NDUFS7O75251 213 aa7.5□□□□□ -1.21
XRN1-212ENST00000486211 C1QAP02745 245 aa7.5□□□□□ -1.21
XRN1-212ENST00000486211 THBDP07204 575 aa7.5□□□□□ -1.21
XRN1-212ENST00000486211 SOD3P08294 240 aa7.5□□□□□ -1.21
XRN1-212ENST00000486211 SLC35G6P0C7Q6 338 aa7.5□□□□□ -1.21
XRN1-212ENST00000486211 RNH1P13489 461 aaKnown RBP7.5□□□□□ -1.21
XRN1-212ENST00000486211 ZNF16P17020 682 aaPredicted RBP7.5□□□□□ -1.21
XRN1-212ENST00000486211 HRH2P25021 359 aa7.5□□□□□ -1.21
XRN1-212ENST00000486211 ATP5DP30049 168 aa7.5□□□□□ -1.21
XRN1-212ENST00000486211 HSD17B2P37059 387 aa7.5□□□□□ -1.21
XRN1-212ENST00000486211 DIO3P55073 304 aa7.5□□□□□ -1.21
XRN1-212ENST00000486211 KCNJ2P63252 427 aa7.5□□□□□ -1.21
XRN1-212ENST00000486211 ACVR1Q04771 509 aa7.5□□□□□ -1.21
XRN1-212ENST00000486211 RPS6KA1Q15418 735 aa7.5□□□□□ -1.21
XRN1-212ENST00000486211 PRR31Q5SQ13 230 aa7.5□□□□□ -1.21
XRN1-212ENST00000486211 SLC22A10Q63ZE4 541 aa7.5□□□□□ -1.21
XRN1-212ENST00000486211 PTRHD1Q6GMV3 140 aaKnown RBP7.5□□□□□ -1.21
XRN1-212ENST00000486211 ALKBH5Q6P6C2 394 aaKnown RBP7.5□□□□□ -1.21
XRN1-212ENST00000486211 ZNF474Q6S9Z5 364 aaPredicted RBP7.5□□□□□ -1.21
XRN1-212ENST00000486211 HSDL2Q6YN16 418 aa7.5□□□□□ -1.21
XRN1-212ENST00000486211 MILR1Q7Z6M3 343 aa7.5□□□□□ -1.21
XRN1-212ENST00000486211 MED12LQ86YW9 2145 aa7.5□□□□□ -1.21
XRN1-212ENST00000486211 GCNT2Q8N0V5 402 aa7.5□□□□□ -1.21
XRN1-212ENST00000486211 ZNF321PQ8N8H1 164 aa7.5□□□□□ -1.21
XRN1-212ENST00000486211 MFSD9Q8NBP5 474 aa7.5□□□□□ -1.21
XRN1-212ENST00000486211 OR4L1Q8NH43 312 aa7.5□□□□□ -1.21
XRN1-212ENST00000486211 TRMT61AQ96FX7 289 aaKnown RBP7.5□□□□□ -1.21
XRN1-212ENST00000486211 ZC3HAV1LQ96H79 300 aaKnown RBP7.5□□□□□ -1.21
XRN1-212ENST00000486211 MEGF10Q96KG7 1140 aa7.5□□□□□ -1.21
XRN1-212ENST00000486211 QRFPRQ96P65 431 aa7.5□□□□□ -1.21
XRN1-212ENST00000486211 PANX3Q96QZ0 392 aa7.5□□□□□ -1.21
XRN1-212ENST00000486211 TTC1Q99614 292 aa7.5□□□□□ -1.21
XRN1-212ENST00000486211 G6PC3Q9BUM1 346 aa7.5□□□□□ -1.21
XRN1-212ENST00000486211 FAM129AQ9BZQ8 928 aa7.5□□□□□ -1.21
XRN1-212ENST00000486211 UBQLN3Q9H347 655 aa7.5□□□□□ -1.21
XRN1-212ENST00000486211 ADAP2Q9NPF8 381 aa7.5□□□□□ -1.21
XRN1-212ENST00000486211 MARCH4Q9P2E8 410 aaPredicted RBP7.5□□□□□ -1.21
XRN1-212ENST00000486211 LCMT1Q9UIC8 334 aa7.5□□□□□ -1.21
XRN1-212ENST00000486211 MMACHCQ9Y4U1 282 aa7.5□□□□□ -1.21
XRN1-212ENST00000486211 PCDHA13Q9Y5I0 950 aa7.5□□□□□ -1.21
XRN1-212ENST00000486211 MALRD1Q5VYJ5 2156 aa7.49□□□□□ -1.21
XRN1-212ENST00000486211 A0A1W2PNV4 684 aa7.49□□□□□ -1.21
XRN1-212ENST00000486211 FRG2CA6NGY1 282 aa7.49□□□□□ -1.21
XRN1-212ENST00000486211 ZNF839A8K0R7 811 aa7.49□□□□□ -1.21
XRN1-212ENST00000486211 CEP104O60308 925 aa7.49□□□□□ -1.21
XRN1-212ENST00000486211 OR10H2O60403 315 aa7.49□□□□□ -1.21
XRN1-212ENST00000486211 LMX1BO60663 402 aa7.49□□□□□ -1.21
XRN1-212ENST00000486211 TRIM3O75382 744 aaPredicted RBP7.49□□□□□ -1.21
XRN1-212ENST00000486211 DEAF1O75398 565 aaPredicted RBP7.49□□□□□ -1.21
XRN1-212ENST00000486211 HPNP05981 417 aa7.49□□□□□ -1.21
XRN1-212ENST00000486211 DANCRP0C864 163 aa7.49□□□□□ -1.21
XRN1-212ENST00000486211 ZNF888P0CJ79 500 aaPredicted RBP7.49□□□□□ -1.21
XRN1-212ENST00000486211 IGHV4-31P0DP07 118 aa7.49□□□□□ -1.21
XRN1-212ENST00000486211 ITGA2P17301 1181 aa7.49□□□□□ -1.21
XRN1-212ENST00000486211 GDF1P27539 372 aa7.49□□□□□ -1.21
XRN1-212ENST00000486211 CDKN1AP38936 164 aa7.49□□□□□ -1.21
XRN1-212ENST00000486211 COMPP49747 757 aaPredicted RBP7.49□□□□□ -1.21
XRN1-212ENST00000486211 CDK9P50750 372 aaKnown RBP7.49□□□□□ -1.21
XRN1-212ENST00000486211 RNF4P78317 190 aa7.49□□□□□ -1.21
XRN1-212ENST00000486211 LOXL1Q08397 574 aaPredicted RBP7.49□□□□□ -1.21
XRN1-212ENST00000486211 RCAN2Q14206 197 aa7.49□□□□□ -1.21
XRN1-212ENST00000486211 KCNJ11Q14654 390 aa7.49□□□□□ -1.21
XRN1-212ENST00000486211 PIGGQ5H8A4 983 aa7.49□□□□□ -1.21
XRN1-212ENST00000486211 BEX5Q5H9J7 111 aa7.49□□□□□ -1.21
XRN1-212ENST00000486211 CTSL3PQ5NE16 218 aa7.49□□□□□ -1.21
XRN1-212ENST00000486211 FAM120AOSQ5T036 256 aa7.49□□□□□ -1.21
XRN1-212ENST00000486211 CAND1Q86VP6 1230 aaKnown RBP7.49□□□□□ -1.21
XRN1-212ENST00000486211 CCDC50Q8IVM0 306 aa7.49□□□□□ -1.21
XRN1-212ENST00000486211 TMEM52Q8NDY8 209 aa7.49□□□□□ -1.21
XRN1-212ENST00000486211 OR8K3Q8NH51 312 aa7.49□□□□□ -1.21
XRN1-212ENST00000486211 STARD4Q96DR4 205 aa7.49□□□□□ -1.21
XRN1-212ENST00000486211 ZNF778Q96MU6 729 aa7.49□□□□□ -1.21
XRN1-212ENST00000486211 ALS2CR12Q96Q35 445 aa7.49□□□□□ -1.21
XRN1-212ENST00000486211 PANX2Q96RD6 677 aa7.49□□□□□ -1.21
XRN1-212ENST00000486211 TM9SF2Q99805 663 aa7.49□□□□□ -1.21
XRN1-212ENST00000486211 TUBA1CQ9BQE3 449 aa7.49□□□□□ -1.21
XRN1-212ENST00000486211 FERMT1Q9BQL6 677 aa7.49□□□□□ -1.21
XRN1-212ENST00000486211 PACSIN1Q9BY11 444 aa7.49□□□□□ -1.21
XRN1-212ENST00000486211 AKTIPQ9H8T0 292 aa7.49□□□□□ -1.21
XRN1-212ENST00000486211 CLK4Q9HAZ1 481 aaKnown RBP7.49□□□□□ -1.21
XRN1-212ENST00000486211 FAM114A2Q9NRY5 505 aa7.49□□□□□ -1.21
XRN1-212ENST00000486211 DDX56Q9NY93 547 aaKnown RBP7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms