RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 WDR55Q9H6Y2 383 aaPredicted RBP5.32□□□□□ -1.56
COPS3-208ENST00000486032 BRF2Q9HAW0 419 aa5.32□□□□□ -1.56
COPS3-208ENST00000486032 ASCL3Q9NQ33 180 aa5.32□□□□□ -1.56
COPS3-208ENST00000486032 LHX9Q9NQ69 397 aa5.32□□□□□ -1.56
COPS3-208ENST00000486032 PFDN4Q9NQP4 134 aa5.32□□□□□ -1.56
COPS3-208ENST00000486032 PRDM7Q9NQW5 492 aa5.32□□□□□ -1.56
COPS3-208ENST00000486032 AHSPQ9NZD4 102 aa5.32□□□□□ -1.56
COPS3-208ENST00000486032 TRPC4Q9UBN4 977 aa5.32□□□□□ -1.56
COPS3-208ENST00000486032 CROTQ9UKG9 612 aa5.32□□□□□ -1.56
COPS3-208ENST00000486032 PADI1Q9ULC6 663 aa5.32□□□□□ -1.56
COPS3-208ENST00000486032 CDC14AQ9UNH5 594 aa5.32□□□□□ -1.56
COPS3-208ENST00000486032 ACACBO00763 2458 aa5.32□□□□□ -1.56
COPS3-208ENST00000486032 DMXL2Q8TDJ6 3036 aa5.31□□□□□ -1.56
COPS3-208ENST00000486032 A0A0G2JND7 137 aa5.31□□□□□ -1.56
COPS3-208ENST00000486032 LOC101059948A0A1B0GTJ6 334 aa5.31□□□□□ -1.56
COPS3-208ENST00000486032 OR2W5A6NFC9 320 aa5.31□□□□□ -1.56
COPS3-208ENST00000486032 GLOD5A6NK44 160 aa5.31□□□□□ -1.56
COPS3-208ENST00000486032 TRPC5OSA6NMA1 111 aa5.31□□□□□ -1.56
COPS3-208ENST00000486032 CDRT15L2A8MXV6 281 aa5.31□□□□□ -1.56
COPS3-208ENST00000486032 TMEM229AB2RXF0 380 aa5.31□□□□□ -1.56
COPS3-208ENST00000486032 C9J4A7 227 aa5.31□□□□□ -1.56
COPS3-208ENST00000486032 E9PBE3 544 aa5.31□□□□□ -1.56
COPS3-208ENST00000486032 SLCO1B7G3V0H7 640 aa5.31□□□□□ -1.56
COPS3-208ENST00000486032 SDHDO14521 159 aa5.31□□□□□ -1.56
COPS3-208ENST00000486032 LSM1O15116 133 aaKnown RBP5.31□□□□□ -1.56
COPS3-208ENST00000486032 KLK10O43240 276 aa5.31□□□□□ -1.56
COPS3-208ENST00000486032 AKAP10O43572 662 aa5.31□□□□□ -1.56
COPS3-208ENST00000486032 TMPRSS11DO60235 418 aa5.31□□□□□ -1.56
COPS3-208ENST00000486032 KLHL41O60662 606 aa5.31□□□□□ -1.56
COPS3-208ENST00000486032 RSL1D1O76021 490 aaKnown RBP5.31□□□□□ -1.56
COPS3-208ENST00000486032 LRATO95237 230 aa5.31□□□□□ -1.56
COPS3-208ENST00000486032 NSA2O95478 260 aaKnown RBP5.31□□□□□ -1.56
COPS3-208ENST00000486032 DLGAP3O95886 979 aa5.31□□□□□ -1.56
COPS3-208ENST00000486032 ANXA4P09525 319 aaPredicted RBP5.31□□□□□ -1.56
COPS3-208ENST00000486032 FAM58BPP0C7Q3 252 aa5.31□□□□□ -1.56
COPS3-208ENST00000486032 SMIM10L1P0DMW3 83 aa5.31□□□□□ -1.56
COPS3-208ENST00000486032 TROVE2P10155 538 aaKnown RBP eCLIP5.31□□□□□ -1.56
COPS3-208ENST00000486032 LIPCP11150 499 aa5.31□□□□□ -1.56
COPS3-208ENST00000486032 ATP5A1P25705 553 aaKnown RBP5.31□□□□□ -1.56
COPS3-208ENST00000486032 TIA1P31483 386 aaKnown RBP eCLIP5.31□□□□□ -1.56
COPS3-208ENST00000486032 RORAP35398 523 aa5.31□□□□□ -1.56
COPS3-208ENST00000486032 BSGP35613 385 aa5.31□□□□□ -1.56
COPS3-208ENST00000486032 XCR1P46094 333 aa5.31□□□□□ -1.56
COPS3-208ENST00000486032 HK2P52789 917 aa5.31□□□□□ -1.56
COPS3-208ENST00000486032 MAPK12P53778 367 aa5.31□□□□□ -1.56
COPS3-208ENST00000486032 HNRNPH2P55795 449 aaKnown RBP5.31□□□□□ -1.56
COPS3-208ENST00000486032 RAB38P57729 211 aa5.31□□□□□ -1.56
COPS3-208ENST00000486032 RPS15P62841 145 aaKnown RBP5.31□□□□□ -1.56
COPS3-208ENST00000486032 SKP1P63208 163 aa5.31□□□□□ -1.56
COPS3-208ENST00000486032 ID2Q02363 134 aa5.31□□□□□ -1.56
COPS3-208ENST00000486032 PLAURQ03405 335 aa5.31□□□□□ -1.56
COPS3-208ENST00000486032 OCA2Q04671 838 aa5.31□□□□□ -1.56
COPS3-208ENST00000486032 TBL3Q12788 808 aaKnown RBP5.31□□□□□ -1.56
COPS3-208ENST00000486032 DNASE1L3Q13609 305 aa5.31□□□□□ -1.56
COPS3-208ENST00000486032 FAM53BQ14153 422 aa5.31□□□□□ -1.56
COPS3-208ENST00000486032 RTP5Q14D33 572 aa5.31□□□□□ -1.56
COPS3-208ENST00000486032 ADPRMQ3LIE5 342 aa5.31□□□□□ -1.56
COPS3-208ENST00000486032 TBC1D25Q3MII6 688 aa5.31□□□□□ -1.56
COPS3-208ENST00000486032 ATP6AP1LQ52LC2 224 aa5.31□□□□□ -1.56
COPS3-208ENST00000486032 RFTN2Q52LD8 501 aaPredicted RBP5.31□□□□□ -1.56
COPS3-208ENST00000486032 SPIN4Q56A73 249 aa5.31□□□□□ -1.56
COPS3-208ENST00000486032 VWA2Q5GFL6 755 aa5.31□□□□□ -1.56
COPS3-208ENST00000486032 YOD1Q5VVQ6 348 aaPredicted RBP5.31□□□□□ -1.56
COPS3-208ENST00000486032 C18orf63Q68DL7 685 aa5.31□□□□□ -1.56
COPS3-208ENST00000486032 PRMT9Q6P2P2 845 aa5.31□□□□□ -1.56
COPS3-208ENST00000486032 ACAD11Q709F0 780 aa5.31□□□□□ -1.56
COPS3-208ENST00000486032 PAGE2Q7Z2X7 111 aa5.31□□□□□ -1.56
COPS3-208ENST00000486032 MAVSQ7Z434 540 aa5.31□□□□□ -1.56
COPS3-208ENST00000486032 CLNKQ7Z7G1 428 aa5.31□□□□□ -1.56
COPS3-208ENST00000486032 CPLX4Q7Z7G2 160 aa5.31□□□□□ -1.56
COPS3-208ENST00000486032 TMEM151BQ8IW70 566 aa5.31□□□□□ -1.56
COPS3-208ENST00000486032 KIRREL3Q8IZU9 778 aa5.31□□□□□ -1.56
COPS3-208ENST00000486032 METTL4Q8N3J2 472 aa5.31□□□□□ -1.56
COPS3-208ENST00000486032 LIX1Q8N485 282 aa5.31□□□□□ -1.56
COPS3-208ENST00000486032 ARHGEF39Q8N4T4 335 aa5.31□□□□□ -1.56
COPS3-208ENST00000486032 ESX1Q8N693 406 aa5.31□□□□□ -1.56
COPS3-208ENST00000486032 ENDOVQ8N8Q3 282 aaKnown RBP5.31□□□□□ -1.56
COPS3-208ENST00000486032 ACOT4Q8N9L9 421 aa5.31□□□□□ -1.56
COPS3-208ENST00000486032 OR51Q1Q8NH59 317 aa5.31□□□□□ -1.56
COPS3-208ENST00000486032 PROKR1Q8TCW9 393 aa5.31□□□□□ -1.56
COPS3-208ENST00000486032 CHTF18Q8WVB6 975 aa5.31□□□□□ -1.56
COPS3-208ENST00000486032 UCN3Q969E3 161 aa5.31□□□□□ -1.56
COPS3-208ENST00000486032 NKD1Q969G9 470 aa5.31□□□□□ -1.56
COPS3-208ENST00000486032 GFM2Q969S9 779 aaKnown RBP5.31□□□□□ -1.56
COPS3-208ENST00000486032 CHMP6Q96FZ7 201 aa5.31□□□□□ -1.56
COPS3-208ENST00000486032 SMIM10Q96HG1 83 aa5.31□□□□□ -1.56
COPS3-208ENST00000486032 SEC16BQ96JE7 1060 aa5.31□□□□□ -1.56
COPS3-208ENST00000486032 SLC45A3Q96JT2 553 aa5.31□□□□□ -1.56
COPS3-208ENST00000486032 PPP3R2Q96LZ3 170 aa5.31□□□□□ -1.56
COPS3-208ENST00000486032 ZNF578Q96N58 590 aaPredicted RBP5.31□□□□□ -1.56
COPS3-208ENST00000486032 QRFPRQ96P65 431 aa5.31□□□□□ -1.56
COPS3-208ENST00000486032 TSSK3Q96PN8 268 aa5.31□□□□□ -1.56
COPS3-208ENST00000486032 SERINC2Q96SA4 455 aa5.31□□□□□ -1.56
COPS3-208ENST00000486032 MAPKAP1Q9BPZ7 522 aa5.31□□□□□ -1.56
COPS3-208ENST00000486032 ELAC2Q9BQ52 826 aaKnown RBP5.31□□□□□ -1.56
COPS3-208ENST00000486032 EBF4Q9BQW3 602 aa5.31□□□□□ -1.56
COPS3-208ENST00000486032 TRIM55Q9BYV6 548 aa5.31□□□□□ -1.56
COPS3-208ENST00000486032 NSRP1Q9H0G5 558 aaKnown RBP5.31□□□□□ -1.56
COPS3-208ENST00000486032 SLC22A11Q9NSA0 550 aa5.31□□□□□ -1.56
COPS3-208ENST00000486032 C1orf109Q9NX04 203 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms