RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 TRIM13O60858 407 aa11.66□□□□□ -0.54
HMG20B-211ENST00000486028 CRCPO75575 148 aa11.66□□□□□ -0.54
HMG20B-211ENST00000486028 CELA2AP08217 269 aa11.66□□□□□ -0.54
HMG20B-211ENST00000486028 ITGAMP11215 1152 aa11.66□□□□□ -0.54
HMG20B-211ENST00000486028 HSD3B1P14060 373 aa11.66□□□□□ -0.54
HMG20B-211ENST00000486028 HSD3B2P26439 372 aa11.66□□□□□ -0.54
HMG20B-211ENST00000486028 BUD31P41223 144 aaPredicted RBP11.66□□□□□ -0.54
HMG20B-211ENST00000486028 SLC26A5P58743 744 aa11.66□□□□□ -0.54
HMG20B-211ENST00000486028 SERTAD2Q14140 314 aa11.66□□□□□ -0.54
HMG20B-211ENST00000486028 NADK2Q4G0N4 442 aa11.66□□□□□ -0.54
HMG20B-211ENST00000486028 ABHD17BQ5VST6 288 aa11.66□□□□□ -0.54
HMG20B-211ENST00000486028 IGFL2Q6UWQ7 119 aa11.66□□□□□ -0.54
HMG20B-211ENST00000486028 LRIG3Q6UXM1 1119 aa11.66□□□□□ -0.54
HMG20B-211ENST00000486028 LINC00696Q6ZRV3 163 aa11.66□□□□□ -0.54
HMG20B-211ENST00000486028 CLNKQ7Z7G1 428 aa11.66□□□□□ -0.54
HMG20B-211ENST00000486028 PACS2Q86VP3 889 aa11.66□□□□□ -0.54
HMG20B-211ENST00000486028 NUDT13Q86X67 352 aa11.66□□□□□ -0.54
HMG20B-211ENST00000486028 SIRT6Q8N6T7 355 aa11.66□□□□□ -0.54
HMG20B-211ENST00000486028 GBP7Q8N8V2 638 aaPredicted RBP11.66□□□□□ -0.54
HMG20B-211ENST00000486028 TCP10LQ8TDR4 215 aa11.66□□□□□ -0.54
HMG20B-211ENST00000486028 AGAP11Q8TF27 550 aa11.66□□□□□ -0.54
HMG20B-211ENST00000486028 SREK1Q8WXA9 508 aaKnown RBP11.66□□□□□ -0.54
HMG20B-211ENST00000486028 ZIM3Q96PE6 472 aa11.66□□□□□ -0.54
HMG20B-211ENST00000486028 FAM111AQ96PZ2 611 aa11.66□□□□□ -0.54
HMG20B-211ENST00000486028 TRMOQ9BU70 441 aa11.66□□□□□ -0.54
HMG20B-211ENST00000486028 ZNF717Q9BY31 904 aaPredicted RBP11.66□□□□□ -0.54
HMG20B-211ENST00000486028 MRPL1Q9BYD6 325 aaKnown RBP11.66□□□□□ -0.54
HMG20B-211ENST00000486028 ALOXE3Q9BYJ1 711 aa11.66□□□□□ -0.54
HMG20B-211ENST00000486028 RPF2Q9H7B2 306 aaKnown RBP11.66□□□□□ -0.54
HMG20B-211ENST00000486028 WDR41Q9HAD4 459 aa11.66□□□□□ -0.54
HMG20B-211ENST00000486028 KCNK13Q9HB14 408 aa11.66□□□□□ -0.54
HMG20B-211ENST00000486028 ZBTB20Q9HC78 741 aaPredicted RBP11.66□□□□□ -0.54
HMG20B-211ENST00000486028 SLC17A7Q9P2U7 560 aa11.66□□□□□ -0.54
HMG20B-211ENST00000486028 VPS29Q9UBQ0 182 aa11.66□□□□□ -0.54
HMG20B-211ENST00000486028 METRNQ9UJH8 293 aa11.66□□□□□ -0.54
HMG20B-211ENST00000486028 B3GNT3Q9Y2A9 372 aa11.66□□□□□ -0.54
HMG20B-211ENST00000486028 ATG4BQ9Y4P1 393 aa11.66□□□□□ -0.54
HMG20B-211ENST00000486028 ASB4Q9Y574 426 aa11.66□□□□□ -0.54
HMG20B-211ENST00000486028 NUP210LQ5VU65 1888 aa11.66□□□□□ -0.54
HMG20B-211ENST00000486028 TNRC6AQ8NDV7 1962 aaKnown RBP11.65□□□□□ -0.54
HMG20B-211ENST00000486028 PRRC2CQ9Y520 2896 aaKnown RBP11.65□□□□□ -0.54
HMG20B-211ENST00000486028 DYTNA2CJ06 578 aa11.65□□□□□ -0.54
HMG20B-211ENST00000486028 SAGE2PA6NJ88 616 aa11.65□□□□□ -0.54
HMG20B-211ENST00000486028 UBFD1O14562 309 aaKnown RBP11.65□□□□□ -0.54
HMG20B-211ENST00000486028 PROM1O43490 865 aa11.65□□□□□ -0.54
HMG20B-211ENST00000486028 TMPRSS11DO60235 418 aa11.65□□□□□ -0.54
HMG20B-211ENST00000486028 GUCY1B2O75343 617 aa11.65□□□□□ -0.54
HMG20B-211ENST00000486028 MYO1DO94832 1006 aa11.65□□□□□ -0.54
HMG20B-211ENST00000486028 GBAP04062 536 aa11.65□□□□□ -0.54
HMG20B-211ENST00000486028 IFNA16P05015 189 aa11.65□□□□□ -0.54
HMG20B-211ENST00000486028 KLK1P06870 262 aa11.65□□□□□ -0.54
HMG20B-211ENST00000486028 MYZAPP0CAP1 466 aa11.65□□□□□ -0.54
HMG20B-211ENST00000486028 PPP2R1BP30154 601 aa11.65□□□□□ -0.54
HMG20B-211ENST00000486028 ALDH3A1P30838 453 aa11.65□□□□□ -0.54
HMG20B-211ENST00000486028 TAS2R50P59544 299 aa11.65□□□□□ -0.54
HMG20B-211ENST00000486028 TNFRSF17Q02223 184 aa11.65□□□□□ -0.54
HMG20B-211ENST00000486028 CSTF3Q12996 717 aaKnown RBP11.65□□□□□ -0.54
HMG20B-211ENST00000486028 BIKQ13323 160 aa11.65□□□□□ -0.54
HMG20B-211ENST00000486028 PCLAFQ15004 111 aa11.65□□□□□ -0.54
HMG20B-211ENST00000486028 ELAVL1Q15717 326 aaKnown RBP11.65□□□□□ -0.54
HMG20B-211ENST00000486028 CCNYL2Q5T2Q4 361 aa11.65□□□□□ -0.54
HMG20B-211ENST00000486028 SLC6A19Q695T7 634 aa11.65□□□□□ -0.54
HMG20B-211ENST00000486028 MRM1Q6IN84 353 aaKnown RBP11.65□□□□□ -0.54
HMG20B-211ENST00000486028 H3F3CQ6NXT2 135 aa11.65□□□□□ -0.54
HMG20B-211ENST00000486028 METTL4Q8N3J2 472 aa11.65□□□□□ -0.54
HMG20B-211ENST00000486028 TMEM132CQ8N3T6 1108 aa11.65□□□□□ -0.54
HMG20B-211ENST00000486028 SLC5A8Q8N695 610 aa11.65□□□□□ -0.54
HMG20B-211ENST00000486028 PNPLA2Q96AD5 504 aa11.65□□□□□ -0.54
HMG20B-211ENST00000486028 CNDP1Q96KN2 507 aa11.65□□□□□ -0.54
HMG20B-211ENST00000486028 ZNF354BQ96LW1 612 aa11.65□□□□□ -0.54
HMG20B-211ENST00000486028 UCN2Q96RP3 112 aa11.65□□□□□ -0.54
HMG20B-211ENST00000486028 GATA5Q9BWX5 397 aaPredicted RBP11.65□□□□□ -0.54
HMG20B-211ENST00000486028 VIPAS39Q9H9C1 493 aa11.65□□□□□ -0.54
HMG20B-211ENST00000486028 ADAP2Q9NPF8 381 aa11.65□□□□□ -0.54
HMG20B-211ENST00000486028 MED4Q9NPJ6 270 aa11.65□□□□□ -0.54
HMG20B-211ENST00000486028 SLAMF7Q9NQ25 335 aa11.65□□□□□ -0.54
HMG20B-211ENST00000486028 STMN3Q9NZ72 180 aa11.65□□□□□ -0.54
HMG20B-211ENST00000486028 VTI1BQ9UEU0 232 aa11.65□□□□□ -0.54
HMG20B-211ENST00000486028 TIMM22Q9Y584 194 aa11.65□□□□□ -0.54
HMG20B-211ENST00000486028 CLCA3PQ9Y6N3 262 aa11.65□□□□□ -0.54
HMG20B-211ENST00000486028 A0A1W2PR48 441 aa11.64□□□□□ -0.55
HMG20B-211ENST00000486028 TTLL8A6PVC2 850 aa11.64□□□□□ -0.55
HMG20B-211ENST00000486028 TGFBR3LH3BV60 316 aa11.64□□□□□ -0.55
HMG20B-211ENST00000486028 TYROBPO43914 113 aa11.64□□□□□ -0.55
HMG20B-211ENST00000486028 LDB3O75112 727 aa11.64□□□□□ -0.55
HMG20B-211ENST00000486028 NR2F6P10588 404 aa11.64□□□□□ -0.55
HMG20B-211ENST00000486028 PLA2G2AP14555 144 aa11.64□□□□□ -0.55
HMG20B-211ENST00000486028 CREB1P16220 341 aa11.64□□□□□ -0.55
HMG20B-211ENST00000486028 TNNI3P19429 210 aa11.64□□□□□ -0.55
HMG20B-211ENST00000486028 MAPK12P53778 367 aa11.64□□□□□ -0.55
HMG20B-211ENST00000486028 ARG2P78540 354 aa11.64□□□□□ -0.55
HMG20B-211ENST00000486028 TBL3Q12788 808 aaKnown RBP11.64□□□□□ -0.55
HMG20B-211ENST00000486028 PLEKHN1Q494U1 663 aaPredicted RBP11.64□□□□□ -0.55
HMG20B-211ENST00000486028 COLEC12Q5KU26 742 aa11.64□□□□□ -0.55
HMG20B-211ENST00000486028 TCHHL1Q5QJ38 904 aaPredicted RBP11.64□□□□□ -0.55
HMG20B-211ENST00000486028 B3GNTL1Q67FW5 361 aaPredicted RBP11.64□□□□□ -0.55
HMG20B-211ENST00000486028 C18orf63Q68DL7 685 aa11.64□□□□□ -0.55
HMG20B-211ENST00000486028 COMMD6Q7Z4G1 85 aa11.64□□□□□ -0.55
HMG20B-211ENST00000486028 EXOC3L1Q86VI1 746 aa11.64□□□□□ -0.55
HMG20B-211ENST00000486028 NFAM1Q8NET5 270 aaPredicted RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms