RNA–Protein interactions for RNA: ENST00000485705.5

RPUSD3-217, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 3

Gene RPUSD3, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-217ENST00000485705 MS4A12Q9NXJ0 267 aa14.55□□□□□ -0.08
RPUSD3-217ENST00000485705 SPACA6W5XKT8 324 aa14.55□□□□□ -0.08
RPUSD3-217ENST00000485705 NUP214P35658 2090 aaPredicted RBP14.54□□□□□ -0.08
RPUSD3-217ENST00000485705 IGKV3D-11A0A0A0MRZ8 115 aa14.54□□□□□ -0.08
RPUSD3-217ENST00000485705 TCP11X1B4DZS4 312 aa14.54□□□□□ -0.08
RPUSD3-217ENST00000485705 ZNF195O14628 629 aa14.54□□□□□ -0.08
RPUSD3-217ENST00000485705 PGRMC2O15173 223 aa14.54□□□□□ -0.08
RPUSD3-217ENST00000485705 IGHEP01854 428 aa14.54□□□□□ -0.08
RPUSD3-217ENST00000485705 ANXA4P09525 319 aaPredicted RBP14.54□□□□□ -0.08
RPUSD3-217ENST00000485705 C8orf89P0DMQ9 161 aa14.54□□□□□ -0.08
RPUSD3-217ENST00000485705 NR2F6P10588 404 aa14.54□□□□□ -0.08
RPUSD3-217ENST00000485705 TACR1P25103 407 aa14.54□□□□□ -0.08
RPUSD3-217ENST00000485705 TAS2R50P59544 299 aa14.54□□□□□ -0.08
RPUSD3-217ENST00000485705 SLC13A2Q13183 592 aa14.54□□□□□ -0.08
RPUSD3-217ENST00000485705 NSDHLQ15738 373 aa14.54□□□□□ -0.08
RPUSD3-217ENST00000485705 COL28A1Q2UY09 1125 aa14.54□□□□□ -0.08
RPUSD3-217ENST00000485705 DEFB109BQ30KR1 87 aa14.54□□□□□ -0.08
RPUSD3-217ENST00000485705 C6orf136Q5SQH8 315 aa14.54□□□□□ -0.08
RPUSD3-217ENST00000485705 NDUFAF5Q5TEU4 345 aa14.54□□□□□ -0.08
RPUSD3-217ENST00000485705 VWA5B1Q5TIE3 1220 aa14.54□□□□□ -0.08
RPUSD3-217ENST00000485705 ANKRD37Q7Z713 158 aa14.54□□□□□ -0.08
RPUSD3-217ENST00000485705 HOMEZQ8IX15 550 aa14.54□□□□□ -0.08
RPUSD3-217ENST00000485705 OR4N5Q8IXE1 308 aa14.54□□□□□ -0.08
RPUSD3-217ENST00000485705 KIRREL3Q8IZU9 778 aa14.54□□□□□ -0.08
RPUSD3-217ENST00000485705 OR11G2Q8NGC1 345 aa14.54□□□□□ -0.08
RPUSD3-217ENST00000485705 PIWIL2Q8TC59 973 aaKnown RBP14.54□□□□□ -0.08
RPUSD3-217ENST00000485705 SNRNP27Q8WVK2 155 aaKnown RBP14.54□□□□□ -0.08
RPUSD3-217ENST00000485705 ANKRD9Q96BM1 317 aaPredicted RBP14.54□□□□□ -0.08
RPUSD3-217ENST00000485705 TUBGCP3Q96CW5 907 aa14.54□□□□□ -0.08
RPUSD3-217ENST00000485705 PPP3R2Q96LZ3 170 aa14.54□□□□□ -0.08
RPUSD3-217ENST00000485705 PRORYQ9H606 182 aa14.54□□□□□ -0.08
RPUSD3-217ENST00000485705 RPF2Q9H7B2 306 aaKnown RBP14.54□□□□□ -0.08
RPUSD3-217ENST00000485705 AKTIPQ9H8T0 292 aa14.54□□□□□ -0.08
RPUSD3-217ENST00000485705 PRDM9Q9NQV7 894 aa14.54□□□□□ -0.08
RPUSD3-217ENST00000485705 P4HTMQ9NXG6 502 aa14.54□□□□□ -0.08
RPUSD3-217ENST00000485705 C5AR2Q9P296 337 aa14.54□□□□□ -0.08
RPUSD3-217ENST00000485705 HEY2Q9UBP5 337 aa14.54□□□□□ -0.08
RPUSD3-217ENST00000485705 MRPS33Q9Y291 106 aaKnown RBP14.54□□□□□ -0.08
RPUSD3-217ENST00000485705 MMACHCQ9Y4U1 282 aa14.54□□□□□ -0.08
RPUSD3-217ENST00000485705 A0A1W2PS29 197 aa14.53□□□□□ -0.08
RPUSD3-217ENST00000485705 CLDN4O14493 209 aa14.53□□□□□ -0.08
RPUSD3-217ENST00000485705 SDHDO14521 159 aa14.53□□□□□ -0.08
RPUSD3-217ENST00000485705 HDAC3O15379 428 aa14.53□□□□□ -0.08
RPUSD3-217ENST00000485705 FGF17O60258 216 aa14.53□□□□□ -0.08
RPUSD3-217ENST00000485705 CTNSO60931 367 aa14.53□□□□□ -0.08
RPUSD3-217ENST00000485705 MYO1DO94832 1006 aa14.53□□□□□ -0.08
RPUSD3-217ENST00000485705 IL3P08700 152 aa14.53□□□□□ -0.08
RPUSD3-217ENST00000485705 ACPPP15309 386 aa14.53□□□□□ -0.08
RPUSD3-217ENST00000485705 PPP2R1BP30154 601 aa14.53□□□□□ -0.08
RPUSD3-217ENST00000485705 BUD31P41223 144 aaPredicted RBP14.53□□□□□ -0.08
RPUSD3-217ENST00000485705 HSD17B7P56937 341 aa14.53□□□□□ -0.08
RPUSD3-217ENST00000485705 CHAF1BQ13112 559 aa14.53□□□□□ -0.08
RPUSD3-217ENST00000485705 ATP6AP1LQ52LC2 224 aa14.53□□□□□ -0.08
RPUSD3-217ENST00000485705 CDC26Q8NHZ8 85 aa14.53□□□□□ -0.08
RPUSD3-217ENST00000485705 METTL21AQ8WXB1 218 aa14.53□□□□□ -0.08
RPUSD3-217ENST00000485705 METTL2AQ96IZ6 378 aaKnown RBP14.53□□□□□ -0.08
RPUSD3-217ENST00000485705 EGLN2Q96KS0 407 aa14.53□□□□□ -0.08
RPUSD3-217ENST00000485705 CCT7Q99832 543 aa14.53□□□□□ -0.08
RPUSD3-217ENST00000485705 C1orf50Q9BV19 199 aa14.53□□□□□ -0.08
RPUSD3-217ENST00000485705 WDR55Q9H6Y2 383 aaPredicted RBP14.53□□□□□ -0.08
RPUSD3-217ENST00000485705 MEAF6Q9HAF1 191 aa14.53□□□□□ -0.08
RPUSD3-217ENST00000485705 RIC8BQ9NVN3 520 aa14.53□□□□□ -0.08
RPUSD3-217ENST00000485705 POLHQ9Y253 713 aa14.53□□□□□ -0.08
RPUSD3-217ENST00000485705 PCDHA9Q9Y5H5 950 aa14.53□□□□□ -0.08
RPUSD3-217ENST00000485705 LOC102723996A0A087X1L8 192 aa14.52□□□□□ -0.09
RPUSD3-217ENST00000485705 TCRBV16S1A1N1A0A5B0 115 aa14.52□□□□□ -0.09
RPUSD3-217ENST00000485705 ARGFXA6NJG6 315 aa14.52□□□□□ -0.09
RPUSD3-217ENST00000485705 A8MUA0 341 aa14.52□□□□□ -0.09
RPUSD3-217ENST00000485705 CYC1P08574 325 aa14.52□□□□□ -0.09
RPUSD3-217ENST00000485705 PRR35P0CG20 571 aa14.52□□□□□ -0.09
RPUSD3-217ENST00000485705 COX6A1P12074 109 aa14.52□□□□□ -0.09
RPUSD3-217ENST00000485705 SDC1P18827 310 aa14.52□□□□□ -0.09
RPUSD3-217ENST00000485705 TLX1P31314 330 aaPredicted RBP14.52□□□□□ -0.09
RPUSD3-217ENST00000485705 MDH1P40925 334 aaKnown RBP14.52□□□□□ -0.09
RPUSD3-217ENST00000485705 TRA2BP62995 288 aaKnown RBP14.52□□□□□ -0.09
RPUSD3-217ENST00000485705 FOLH1Q04609 750 aa14.52□□□□□ -0.09
RPUSD3-217ENST00000485705 ZNF763Q0D2J5 394 aa14.52□□□□□ -0.09
RPUSD3-217ENST00000485705 PCOLCEQ15113 449 aa14.52□□□□□ -0.09
RPUSD3-217ENST00000485705 SLC9B1Q4ZJI4 515 aa14.52□□□□□ -0.09
RPUSD3-217ENST00000485705 SFT2D3Q587I9 215 aa14.52□□□□□ -0.09
RPUSD3-217ENST00000485705 CPZQ66K79 652 aa14.52□□□□□ -0.09
RPUSD3-217ENST00000485705 CPEB2Q7Z5Q1 589 aaKnown RBP14.52□□□□□ -0.09
RPUSD3-217ENST00000485705 FNDC5Q8NAU1 212 aa14.52□□□□□ -0.09
RPUSD3-217ENST00000485705 CLHC1Q8NHS4 586 aa14.52□□□□□ -0.09
RPUSD3-217ENST00000485705 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.52□□□□□ -0.09
RPUSD3-217ENST00000485705 DNAJB14Q8TBM8 379 aa14.52□□□□□ -0.09
RPUSD3-217ENST00000485705 THAP4Q8WY91 577 aa14.52□□□□□ -0.09
RPUSD3-217ENST00000485705 TANKQ92844 425 aa14.52□□□□□ -0.09
RPUSD3-217ENST00000485705 WDR77Q9BQA1 342 aaPredicted RBP14.52□□□□□ -0.09
RPUSD3-217ENST00000485705 PFDN4Q9NQP4 134 aa14.52□□□□□ -0.09
RPUSD3-217ENST00000485705 VTI1BQ9UEU0 232 aa14.52□□□□□ -0.09
RPUSD3-217ENST00000485705 BAIAP2L1Q9UHR4 511 aa14.52□□□□□ -0.09
RPUSD3-217ENST00000485705 FBXL4Q9UKA2 621 aa14.52□□□□□ -0.09
RPUSD3-217ENST00000485705 CES1P1Q9UKY3 287 aa14.52□□□□□ -0.09
RPUSD3-217ENST00000485705 EXO1Q9UQ84 846 aaKnown RBP14.52□□□□□ -0.09
RPUSD3-217ENST00000485705 MAN2B2Q9Y2E5 1009 aa14.52□□□□□ -0.09
RPUSD3-217ENST00000485705 USH1CQ9Y6N9 552 aa14.52□□□□□ -0.09
RPUSD3-217ENST00000485705 IGHV1-45A0A0A0MS14 117 aa14.51□□□□□ -0.09
RPUSD3-217ENST00000485705 GOLGA8QA0A0J9YX86 632 aa14.51□□□□□ -0.09
RPUSD3-217ENST00000485705 GOLGA8OA6NCC3 632 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms