RNA–Protein interactions for RNA: ENST00000484078.5

SUPT20H-217, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 1 (best)

Gene SUPT20H, Length 1,876 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-217ENST00000484078 DR1Q01658 176 aa5.32□□□□□ -1.56
SUPT20H-217ENST00000484078 PLOD1Q02809 727 aaPredicted RBP5.32□□□□□ -1.56
SUPT20H-217ENST00000484078 RPA4Q13156 261 aa5.32□□□□□ -1.56
SUPT20H-217ENST00000484078 ERV3-1Q14264 604 aa5.32□□□□□ -1.56
SUPT20H-217ENST00000484078 GPR18Q14330 331 aa5.32□□□□□ -1.56
SUPT20H-217ENST00000484078 KRT33BQ14525 404 aa5.32□□□□□ -1.56
SUPT20H-217ENST00000484078 SEMA3AQ14563 771 aa5.32□□□□□ -1.56
SUPT20H-217ENST00000484078 C16orf72Q14CZ0 275 aa5.32□□□□□ -1.56
SUPT20H-217ENST00000484078 TBC1D25Q3MII6 688 aa5.32□□□□□ -1.56
SUPT20H-217ENST00000484078 ANKRD20A4Q4UJ75 823 aa5.32□□□□□ -1.56
SUPT20H-217ENST00000484078 ZNF362Q5T0B9 420 aaPredicted RBP5.32□□□□□ -1.56
SUPT20H-217ENST00000484078 SFRP4Q6FHJ7 346 aaPredicted RBP5.32□□□□□ -1.56
SUPT20H-217ENST00000484078 KIAA0930Q6ICG6 404 aaPredicted RBP5.32□□□□□ -1.56
SUPT20H-217ENST00000484078 CAPRIN2Q6IMN6 1127 aaKnown RBP5.32□□□□□ -1.56
SUPT20H-217ENST00000484078 WDR74Q6RFH5 385 aaPredicted RBP5.32□□□□□ -1.56
SUPT20H-217ENST00000484078 SYT10Q6XYQ8 523 aa5.32□□□□□ -1.56
SUPT20H-217ENST00000484078 R3HCC1LQ7Z5L2 792 aaKnown RBP5.32□□□□□ -1.56
SUPT20H-217ENST00000484078 LDB1Q86U70 411 aaPredicted RBP5.32□□□□□ -1.56
SUPT20H-217ENST00000484078 ELMO1Q92556 727 aa5.32□□□□□ -1.56
SUPT20H-217ENST00000484078 TRMT61AQ96FX7 289 aaKnown RBP5.32□□□□□ -1.56
SUPT20H-217ENST00000484078 REXO5Q96IC2 774 aaKnown RBP5.32□□□□□ -1.56
SUPT20H-217ENST00000484078 RMDN2Q96LZ7 410 aa5.32□□□□□ -1.56
SUPT20H-217ENST00000484078 DCLRE1CQ96SD1 692 aaKnown RBP5.32□□□□□ -1.56
SUPT20H-217ENST00000484078 CARD6Q9BX69 1037 aa5.32□□□□□ -1.56
SUPT20H-217ENST00000484078 THSD1Q9NS62 852 aa5.32□□□□□ -1.56
SUPT20H-217ENST00000484078 IMP3Q9NV31 184 aaKnown RBP5.32□□□□□ -1.56
SUPT20H-217ENST00000484078 TMEM9Q9P0T7 183 aa5.32□□□□□ -1.56
SUPT20H-217ENST00000484078 CCDC88CQ9P219 2028 aa5.32□□□□□ -1.56
SUPT20H-217ENST00000484078 MARCH4Q9P2E8 410 aaPredicted RBP5.32□□□□□ -1.56
SUPT20H-217ENST00000484078 PISDQ9UG56 409 aa5.32□□□□□ -1.56
SUPT20H-217ENST00000484078 LOXL2Q9Y4K0 774 aa5.32□□□□□ -1.56
SUPT20H-217ENST00000484078 COLEC10Q9Y6Z7 277 aa5.32□□□□□ -1.56
SUPT20H-217ENST00000484078 HELZ2Q9BYK8 2649 aaKnown RBP5.31□□□□□ -1.56
SUPT20H-217ENST00000484078 A8MU76 341 aa5.31□□□□□ -1.56
SUPT20H-217ENST00000484078 GOLGA8KD6RF30 607 aa5.31□□□□□ -1.56
SUPT20H-217ENST00000484078 GOLGA8TH3BQL2 631 aa5.31□□□□□ -1.56
SUPT20H-217ENST00000484078 LIN7AO14910 233 aaPredicted RBP5.31□□□□□ -1.56
SUPT20H-217ENST00000484078 PFDN6O15212 129 aa5.31□□□□□ -1.56
SUPT20H-217ENST00000484078 TTI1O43156 1089 aa5.31□□□□□ -1.56
SUPT20H-217ENST00000484078 THRAP10827 490 aa5.31□□□□□ -1.56
SUPT20H-217ENST00000484078 STMN1P16949 149 aa5.31□□□□□ -1.56
SUPT20H-217ENST00000484078 BMP7P18075 431 aa5.31□□□□□ -1.56
SUPT20H-217ENST00000484078 RPS3P23396 243 aaKnown RBP eCLIP5.31□□□□□ -1.56
SUPT20H-217ENST00000484078 CFPP27918 469 aa5.31□□□□□ -1.56
SUPT20H-217ENST00000484078 PDHA2P29803 388 aa5.31□□□□□ -1.56
SUPT20H-217ENST00000484078 CSTF2P33240 577 aaKnown RBP eCLIP5.31□□□□□ -1.56
SUPT20H-217ENST00000484078 MAGEA3P43357 314 aa5.31□□□□□ -1.56
SUPT20H-217ENST00000484078 GSTM5P46439 218 aa5.31□□□□□ -1.56
SUPT20H-217ENST00000484078 ARCN1P48444 511 aaKnown RBP5.31□□□□□ -1.56
SUPT20H-217ENST00000484078 TPD52P55327 224 aaPredicted RBP5.31□□□□□ -1.56
SUPT20H-217ENST00000484078 DHX34Q14147 1143 aaKnown RBP5.31□□□□□ -1.56
SUPT20H-217ENST00000484078 ZNF658BQ4V348 819 aaPredicted RBP5.31□□□□□ -1.56
SUPT20H-217ENST00000484078 NEPROQ6NW34 567 aa5.31□□□□□ -1.56
SUPT20H-217ENST00000484078 RPUSD3Q6P087 351 aaKnown RBP5.31□□□□□ -1.56
SUPT20H-217ENST00000484078 KLHL35Q6PF15 583 aa5.31□□□□□ -1.56
SUPT20H-217ENST00000484078 C16orf87Q6PH81 154 aa5.31□□□□□ -1.56
SUPT20H-217ENST00000484078 ARHGAP22Q7Z5H3 698 aa5.31□□□□□ -1.56
SUPT20H-217ENST00000484078 TMEM135Q86UB9 458 aa5.31□□□□□ -1.56
SUPT20H-217ENST00000484078 HOOK3Q86VS8 718 aa5.31□□□□□ -1.56
SUPT20H-217ENST00000484078 LRRC6Q86X45 466 aa5.31□□□□□ -1.56
SUPT20H-217ENST00000484078 CPEB3Q8NE35 698 aaKnown RBP5.31□□□□□ -1.56
SUPT20H-217ENST00000484078 GPR150Q8NGU9 434 aa5.31□□□□□ -1.56
SUPT20H-217ENST00000484078 SLC2A12Q8TD20 617 aa5.31□□□□□ -1.56
SUPT20H-217ENST00000484078 PRR25Q96S07 402 aa5.31□□□□□ -1.56
SUPT20H-217ENST00000484078 KRT12Q99456 494 aa5.31□□□□□ -1.56
SUPT20H-217ENST00000484078 TSSK1BQ9BXA7 367 aa5.31□□□□□ -1.56
SUPT20H-217ENST00000484078 OR52A5Q9H2C5 316 aa5.31□□□□□ -1.56
SUPT20H-217ENST00000484078 ASCL3Q9NQ33 180 aa5.31□□□□□ -1.56
SUPT20H-217ENST00000484078 OGFRQ9NZT2 677 aa5.31□□□□□ -1.56
SUPT20H-217ENST00000484078 EPHA6Q9UF33 1036 aa5.31□□□□□ -1.56
SUPT20H-217ENST00000484078 GNPTGQ9UJJ9 305 aa5.31□□□□□ -1.56
SUPT20H-217ENST00000484078 CAMK2AQ9UQM7 478 aa5.31□□□□□ -1.56
SUPT20H-217ENST00000484078 MAD1L1Q9Y6D9 718 aa5.31□□□□□ -1.56
SUPT20H-217ENST00000484078 MDC1Q14676 2089 aaKnown RBP5.31□□□□□ -1.56
SUPT20H-217ENST00000484078 SLC5A10A0PJK1 596 aa5.3□□□□□ -1.56
SUPT20H-217ENST00000484078 CDRT15L2A8MXV6 281 aa5.3□□□□□ -1.56
SUPT20H-217ENST00000484078 DIRC3C9JPN6 131 aa5.3□□□□□ -1.56
SUPT20H-217ENST00000484078 PEX12O00623 359 aa5.3□□□□□ -1.56
SUPT20H-217ENST00000484078 RRP8O43159 456 aaKnown RBP5.3□□□□□ -1.56
SUPT20H-217ENST00000484078 SPDEFO95238 335 aa5.3□□□□□ -1.56
SUPT20H-217ENST00000484078 C9P02748 559 aa5.3□□□□□ -1.56
SUPT20H-217ENST00000484078 CCL4P13236 92 aa5.3□□□□□ -1.56
SUPT20H-217ENST00000484078 CHN1P15882 459 aa5.3□□□□□ -1.56
SUPT20H-217ENST00000484078 ALOX12P18054 663 aa5.3□□□□□ -1.56
SUPT20H-217ENST00000484078 ITGB6P18564 788 aa5.3□□□□□ -1.56
SUPT20H-217ENST00000484078 ITIH1P19827 911 aa5.3□□□□□ -1.56
SUPT20H-217ENST00000484078 OGNP20774 298 aaKnown RBP5.3□□□□□ -1.56
SUPT20H-217ENST00000484078 FMO4P31512 558 aa5.3□□□□□ -1.56
SUPT20H-217ENST00000484078 EIF2S3P41091 472 aaKnown RBP5.3□□□□□ -1.56
SUPT20H-217ENST00000484078 ETV5P41161 510 aa5.3□□□□□ -1.56
SUPT20H-217ENST00000484078 GFERP55789 205 aa5.3□□□□□ -1.56
SUPT20H-217ENST00000484078 EIF3BP55884 814 aaKnown RBP5.3□□□□□ -1.56
SUPT20H-217ENST00000484078 THOC5Q13769 683 aaKnown RBP5.3□□□□□ -1.56
SUPT20H-217ENST00000484078 MORF4L2Q15014 288 aa5.3□□□□□ -1.56
SUPT20H-217ENST00000484078 SYTL3Q4VX76 610 aa5.3□□□□□ -1.56
SUPT20H-217ENST00000484078 PTRHD1Q6GMV3 140 aaKnown RBP5.3□□□□□ -1.56
SUPT20H-217ENST00000484078 DUS1LQ6P1R4 473 aaKnown RBP5.3□□□□□ -1.56
SUPT20H-217ENST00000484078 NAPRTQ6XQN6 538 aa5.3□□□□□ -1.56
SUPT20H-217ENST00000484078 PDIK1LQ8N165 341 aa5.3□□□□□ -1.56
SUPT20H-217ENST00000484078 ZNF248Q8NDW4 579 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms