RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 ETHE1O95571 254 aa9.98□□□□□ -0.81
SMARCC1-205ENST00000483847 GUCA1CO95843 209 aa9.98□□□□□ -0.81
SMARCC1-205ENST00000483847 HIST1H2AGP0C0S8 130 aaPredicted RBP9.98□□□□□ -0.81
SMARCC1-205ENST00000483847 HIST1H2ADP20671 130 aa9.98□□□□□ -0.81
SMARCC1-205ENST00000483847 KCNJ1P48048 391 aa9.98□□□□□ -0.81
SMARCC1-205ENST00000483847 RGS4P49798 205 aa9.98□□□□□ -0.81
SMARCC1-205ENST00000483847 CDKN2DP55273 166 aa9.98□□□□□ -0.81
SMARCC1-205ENST00000483847 CDK16Q00536 496 aa9.98□□□□□ -0.81
SMARCC1-205ENST00000483847 ID2Q02363 134 aa9.98□□□□□ -0.81
SMARCC1-205ENST00000483847 CBLBQ13191 982 aa9.98□□□□□ -0.81
SMARCC1-205ENST00000483847 PIGGQ5H8A4 983 aa9.98□□□□□ -0.81
SMARCC1-205ENST00000483847 RBM20Q5T481 1227 aaKnown RBP9.98□□□□□ -0.81
SMARCC1-205ENST00000483847 ANKRD22Q5VYY1 191 aa9.98□□□□□ -0.81
SMARCC1-205ENST00000483847 NSUN5P2Q63ZY6 315 aa9.98□□□□□ -0.81
SMARCC1-205ENST00000483847 LRRC8EQ6NSJ5 796 aa9.98□□□□□ -0.81
SMARCC1-205ENST00000483847 NXPE4Q6UWF7 544 aa9.98□□□□□ -0.81
SMARCC1-205ENST00000483847 CAPN12Q6ZSI9 719 aa9.98□□□□□ -0.81
SMARCC1-205ENST00000483847 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.98□□□□□ -0.81
SMARCC1-205ENST00000483847 RNF214Q8ND24 703 aa9.98□□□□□ -0.81
SMARCC1-205ENST00000483847 OR8K3Q8NH51 312 aa9.98□□□□□ -0.81
SMARCC1-205ENST00000483847 OR14A16Q8NHC5 309 aa9.98□□□□□ -0.81
SMARCC1-205ENST00000483847 SLC2A12Q8TD20 617 aa9.98□□□□□ -0.81
SMARCC1-205ENST00000483847 PAQR8Q8TEZ7 354 aa9.98□□□□□ -0.81
SMARCC1-205ENST00000483847 SMPDL3BQ92485 455 aa9.98□□□□□ -0.81
SMARCC1-205ENST00000483847 DAZLQ92904 295 aaKnown RBP9.98□□□□□ -0.81
SMARCC1-205ENST00000483847 GAL3ST3Q96A11 431 aa9.98□□□□□ -0.81
SMARCC1-205ENST00000483847 FBXL8Q96CD0 374 aa9.98□□□□□ -0.81
SMARCC1-205ENST00000483847 MS4A6EQ96DS6 147 aa9.98□□□□□ -0.81
SMARCC1-205ENST00000483847 HSPBAP1Q96EW2 488 aa9.98□□□□□ -0.81
SMARCC1-205ENST00000483847 PERPQ96FX8 193 aa9.98□□□□□ -0.81
SMARCC1-205ENST00000483847 FAR2Q96K12 515 aa9.98□□□□□ -0.81
SMARCC1-205ENST00000483847 HIST1H2AHQ96KK5 128 aa9.98□□□□□ -0.81
SMARCC1-205ENST00000483847 JSRP1Q96MG2 331 aaPredicted RBP9.98□□□□□ -0.81
SMARCC1-205ENST00000483847 DACH2Q96NX9 599 aa9.98□□□□□ -0.81
SMARCC1-205ENST00000483847 HIST1H2AJQ99878 128 aa9.98□□□□□ -0.81
SMARCC1-205ENST00000483847 AIF1LQ9BQI0 150 aa9.98□□□□□ -0.81
SMARCC1-205ENST00000483847 H2AFJQ9BTM1 129 aa9.98□□□□□ -0.81
SMARCC1-205ENST00000483847 NPLQ9BXD5 320 aaPredicted RBP9.98□□□□□ -0.81
SMARCC1-205ENST00000483847 ALOXE3Q9BYJ1 711 aa9.98□□□□□ -0.81
SMARCC1-205ENST00000483847 PELI2Q9HAT8 420 aa9.98□□□□□ -0.81
SMARCC1-205ENST00000483847 C20orf96Q9NUD7 363 aaPredicted RBP9.98□□□□□ -0.81
SMARCC1-205ENST00000483847 GALNT8Q9NY28 637 aa9.98□□□□□ -0.81
SMARCC1-205ENST00000483847 VTI1BQ9UEU0 232 aa9.98□□□□□ -0.81
SMARCC1-205ENST00000483847 IKZF3Q9UKT9 509 aa9.98□□□□□ -0.81
SMARCC1-205ENST00000483847 BOKQ9UMX3 212 aaPredicted RBP9.98□□□□□ -0.81
SMARCC1-205ENST00000483847 NINQ8N4C6 2090 aa9.98□□□□□ -0.81
SMARCC1-205ENST00000483847 CHD3Q12873 2000 aaKnown RBP9.97□□□□□ -0.81
SMARCC1-205ENST00000483847 SH3D21A4FU49 640 aa9.97□□□□□ -0.81
SMARCC1-205ENST00000483847 LRIT2A6NDA9 550 aa9.97□□□□□ -0.81
SMARCC1-205ENST00000483847 MBD3L4A6NDZ8 208 aaPredicted RBP9.97□□□□□ -0.81
SMARCC1-205ENST00000483847 MBD3L5A6NJ08 208 aaPredicted RBP9.97□□□□□ -0.81
SMARCC1-205ENST00000483847 RNF212BA8MTL3 300 aa9.97□□□□□ -0.81
SMARCC1-205ENST00000483847 SIAH2O43255 324 aa9.97□□□□□ -0.81
SMARCC1-205ENST00000483847 B3GALT2O43825 422 aa9.97□□□□□ -0.81
SMARCC1-205ENST00000483847 CTNSO60931 367 aa9.97□□□□□ -0.81
SMARCC1-205ENST00000483847 LDB3O75112 727 aa9.97□□□□□ -0.81
SMARCC1-205ENST00000483847 CRLF1O75462 422 aa9.97□□□□□ -0.81
SMARCC1-205ENST00000483847 TBX6O95947 436 aaPredicted RBP9.97□□□□□ -0.81
SMARCC1-205ENST00000483847 TNNI3P19429 210 aa9.97□□□□□ -0.81
SMARCC1-205ENST00000483847 CTSSP25774 331 aa9.97□□□□□ -0.81
SMARCC1-205ENST00000483847 GDF1P27539 372 aa9.97□□□□□ -0.81
SMARCC1-205ENST00000483847 CERS1P27544 350 aa9.97□□□□□ -0.81
SMARCC1-205ENST00000483847 PLA2G16P53816 162 aa9.97□□□□□ -0.81
SMARCC1-205ENST00000483847 LIM2P55344 173 aa9.97□□□□□ -0.81
SMARCC1-205ENST00000483847 KRTAP1-1Q07627 177 aa9.97□□□□□ -0.81
SMARCC1-205ENST00000483847 FOXF2Q12947 444 aa9.97□□□□□ -0.81
SMARCC1-205ENST00000483847 TRIP13Q15645 432 aaPredicted RBP9.97□□□□□ -0.81
SMARCC1-205ENST00000483847 CCNG2Q16589 344 aa9.97□□□□□ -0.81
SMARCC1-205ENST00000483847 MPEG1Q2M385 716 aa9.97□□□□□ -0.81
SMARCC1-205ENST00000483847 BBS9Q3SYG4 887 aa9.97□□□□□ -0.81
SMARCC1-205ENST00000483847 HSP90AA5PQ58FG0 334 aa9.97□□□□□ -0.81
SMARCC1-205ENST00000483847 DCST1Q5T197 706 aa9.97□□□□□ -0.81
SMARCC1-205ENST00000483847 ADNP2Q6IQ32 1131 aa9.97□□□□□ -0.81
SMARCC1-205ENST00000483847 PRSS57Q6UWY2 283 aa9.97□□□□□ -0.81
SMARCC1-205ENST00000483847 GSTA5Q7RTV2 222 aa9.97□□□□□ -0.81
SMARCC1-205ENST00000483847 KIAA1328Q86T90 577 aa9.97□□□□□ -0.81
SMARCC1-205ENST00000483847 THOC6Q86W42 341 aaKnown RBP9.97□□□□□ -0.81
SMARCC1-205ENST00000483847 C9orf40Q8IXQ3 194 aa9.97□□□□□ -0.81
SMARCC1-205ENST00000483847 KLHDC8AQ8IYD2 350 aa9.97□□□□□ -0.81
SMARCC1-205ENST00000483847 AGGF1Q8N302 714 aaeCLIP9.97□□□□□ -0.81
SMARCC1-205ENST00000483847 RASGEF1CQ8N431 466 aa9.97□□□□□ -0.81
SMARCC1-205ENST00000483847 FAM13CQ8NE31 585 aa9.97□□□□□ -0.81
SMARCC1-205ENST00000483847 OR10G3Q8NGC4 313 aa9.97□□□□□ -0.81
SMARCC1-205ENST00000483847 OR5L2Q8NGL0 311 aa9.97□□□□□ -0.81
SMARCC1-205ENST00000483847 ZNF721Q8TF20 911 aa9.97□□□□□ -0.81
SMARCC1-205ENST00000483847 SPACA9Q96E40 222 aaPredicted RBP9.97□□□□□ -0.81
SMARCC1-205ENST00000483847 RUNDC3BQ96NL0 473 aa9.97□□□□□ -0.81
SMARCC1-205ENST00000483847 TRIB1Q96RU8 372 aa9.97□□□□□ -0.81
SMARCC1-205ENST00000483847 PIP5K1AQ99755 562 aa9.97□□□□□ -0.81
SMARCC1-205ENST00000483847 RBM24Q9BX46 236 aaKnown RBP9.97□□□□□ -0.81
SMARCC1-205ENST00000483847 PRDM14Q9GZV8 571 aa9.97□□□□□ -0.81
SMARCC1-205ENST00000483847 QPCTLQ9NXS2 382 aa9.97□□□□□ -0.81
SMARCC1-205ENST00000483847 C6orf203Q9P0P8 240 aaPredicted RBP9.97□□□□□ -0.81
SMARCC1-205ENST00000483847 CAMK2AQ9UQM7 478 aa9.97□□□□□ -0.81
SMARCC1-205ENST00000483847 SLC22A14Q9Y267 594 aa9.97□□□□□ -0.81
SMARCC1-205ENST00000483847 MRPS33Q9Y291 106 aaKnown RBP9.97□□□□□ -0.81
SMARCC1-205ENST00000483847 SLC6A5Q9Y345 797 aa9.97□□□□□ -0.81
SMARCC1-205ENST00000483847 DYRK1BQ9Y463 629 aa9.97□□□□□ -0.81
SMARCC1-205ENST00000483847 MBD3L3A6NE82 208 aaPredicted RBP9.96□□□□□ -0.82
SMARCC1-205ENST00000483847 CD8B2A6NJW9 211 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms