RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 CRLF3Q8IUI8 442 aa5.51□□□□□ -1.53
CSDE1-207ENST00000483407 LGI4Q8N135 537 aa5.51□□□□□ -1.53
CSDE1-207ENST00000483407 ADAMTS18Q8TE60 1221 aa5.51□□□□□ -1.53
CSDE1-207ENST00000483407 AGAP11Q8TF27 550 aa5.51□□□□□ -1.53
CSDE1-207ENST00000483407 CA5BP1Q8WTZ4 195 aa5.51□□□□□ -1.53
CSDE1-207ENST00000483407 PHF10Q8WUB8 498 aaKnown RBP5.51□□□□□ -1.53
CSDE1-207ENST00000483407 MAIP1Q8WWC4 291 aa5.51□□□□□ -1.53
CSDE1-207ENST00000483407 KCNJ9Q92806 393 aa5.51□□□□□ -1.53
CSDE1-207ENST00000483407 SCMH1Q96GD3 660 aa5.51□□□□□ -1.53
CSDE1-207ENST00000483407 PRAP1Q96NZ9 151 aa5.51□□□□□ -1.53
CSDE1-207ENST00000483407 SIGLEC12Q96PQ1 595 aa5.51□□□□□ -1.53
CSDE1-207ENST00000483407 OR1F2PQ96R84 312 aa5.51□□□□□ -1.53
CSDE1-207ENST00000483407 SYNPO2LQ9H987 977 aa5.51□□□□□ -1.53
CSDE1-207ENST00000483407 CCDC177Q9NQR7 707 aaPredicted RBP5.51□□□□□ -1.53
CSDE1-207ENST00000483407 INTS10Q9NVR2 710 aaKnown RBP5.51□□□□□ -1.53
CSDE1-207ENST00000483407 SYBUQ9NX95 663 aa5.51□□□□□ -1.53
CSDE1-207ENST00000483407 ANKRD10Q9NXR5 420 aa5.51□□□□□ -1.53
CSDE1-207ENST00000483407 HCN3Q9P1Z3 774 aa5.51□□□□□ -1.53
CSDE1-207ENST00000483407 LRFN1Q9P244 771 aa5.51□□□□□ -1.53
CSDE1-207ENST00000483407 EDARQ9UNE0 448 aa5.51□□□□□ -1.53
CSDE1-207ENST00000483407 NAV3Q8IVL0 2385 aa5.51□□□□□ -1.53
CSDE1-207ENST00000483407 SVILO95425 2214 aa5.51□□□□□ -1.53
CSDE1-207ENST00000483407 ZGRF1Q86YA3 2104 aa5.5□□□□□ -1.53
CSDE1-207ENST00000483407 MAGEB16A2A368 324 aa5.5□□□□□ -1.53
CSDE1-207ENST00000483407 PABPN1LA6NDY0 278 aaKnown RBP5.5□□□□□ -1.53
CSDE1-207ENST00000483407 MAGEB17A8MXT2 336 aa5.5□□□□□ -1.53
CSDE1-207ENST00000483407 E9PLN8 166 aa5.5□□□□□ -1.53
CSDE1-207ENST00000483407 C19orf84I3L1E1 186 aa5.5□□□□□ -1.53
CSDE1-207ENST00000483407 GFYI3L273 518 aa5.5□□□□□ -1.53
CSDE1-207ENST00000483407 SGK494L7N484 410 aa5.5□□□□□ -1.53
CSDE1-207ENST00000483407 EIF3FO00303 357 aaPredicted RBP5.5□□□□□ -1.53
CSDE1-207ENST00000483407 NDC80O14777 642 aa5.5□□□□□ -1.53
CSDE1-207ENST00000483407 RDH16O75452 317 aa5.5□□□□□ -1.53
CSDE1-207ENST00000483407 SLC25A12O75746 678 aa5.5□□□□□ -1.53
CSDE1-207ENST00000483407 CDC123O75794 336 aaPredicted RBP5.5□□□□□ -1.53
CSDE1-207ENST00000483407 APOL3O95236 402 aa5.5□□□□□ -1.53
CSDE1-207ENST00000483407 STATHP02808 62 aa5.5□□□□□ -1.53
CSDE1-207ENST00000483407 LPLP06858 475 aa5.5□□□□□ -1.53
CSDE1-207ENST00000483407 SP1P08047 785 aa5.5□□□□□ -1.53
CSDE1-207ENST00000483407 OSMP13725 252 aa5.5□□□□□ -1.53
CSDE1-207ENST00000483407 ZNF24P17028 368 aa5.5□□□□□ -1.53
CSDE1-207ENST00000483407 TPSB2P20231 275 aa5.5□□□□□ -1.53
CSDE1-207ENST00000483407 JAK1P23458 1154 aa5.5□□□□□ -1.53
CSDE1-207ENST00000483407 IMPA1P29218 277 aa5.5□□□□□ -1.53
CSDE1-207ENST00000483407 SKIV2L2P42285 1042 aaKnown RBP5.5□□□□□ -1.53
CSDE1-207ENST00000483407 CYB561P49447 251 aa5.5□□□□□ -1.53
CSDE1-207ENST00000483407 ZNF75DP51815 510 aa5.5□□□□□ -1.53
CSDE1-207ENST00000483407 EFNA3P52797 238 aa5.5□□□□□ -1.53
CSDE1-207ENST00000483407 OR4D2P58180 307 aa5.5□□□□□ -1.53
CSDE1-207ENST00000483407 CSNK1G2P78368 415 aa5.5□□□□□ -1.53
CSDE1-207ENST00000483407 TLE4Q04727 773 aa5.5□□□□□ -1.53
CSDE1-207ENST00000483407 CUL1Q13616 776 aa5.5□□□□□ -1.53
CSDE1-207ENST00000483407 DHX34Q14147 1143 aaKnown RBP5.5□□□□□ -1.53
CSDE1-207ENST00000483407 TRIM25Q14258 630 aaKnown RBP5.5□□□□□ -1.53
CSDE1-207ENST00000483407 USP10Q14694 798 aaKnown RBP5.5□□□□□ -1.53
CSDE1-207ENST00000483407 HERC3Q15034 1050 aa5.5□□□□□ -1.53
CSDE1-207ENST00000483407 RPS6KA1Q15418 735 aa5.5□□□□□ -1.53
CSDE1-207ENST00000483407 TPSAB1Q15661 275 aa5.5□□□□□ -1.53
CSDE1-207ENST00000483407 SFT2D3Q587I9 215 aa5.5□□□□□ -1.53
CSDE1-207ENST00000483407 PRAMEF9Q5VWM5 478 aa5.5□□□□□ -1.53
CSDE1-207ENST00000483407 ZNF470Q6ECI4 717 aa5.5□□□□□ -1.53
CSDE1-207ENST00000483407 CAPN13Q6MZZ7 669 aaPredicted RBP5.5□□□□□ -1.53
CSDE1-207ENST00000483407 LRRC8EQ6NSJ5 796 aa5.5□□□□□ -1.53
CSDE1-207ENST00000483407 UGT3A1Q6NUS8 523 aa5.5□□□□□ -1.53
CSDE1-207ENST00000483407 NIPAL1Q6NVV3 410 aa5.5□□□□□ -1.53
CSDE1-207ENST00000483407 MEX3BQ6ZN04 569 aaKnown RBP5.5□□□□□ -1.53
CSDE1-207ENST00000483407 CENPUQ71F23 418 aa5.5□□□□□ -1.53
CSDE1-207ENST00000483407 PRSS41Q7RTY9 318 aa5.5□□□□□ -1.53
CSDE1-207ENST00000483407 VN1R4Q7Z5H5 301 aa5.5□□□□□ -1.53
CSDE1-207ENST00000483407 C17orf64Q86WR6 236 aa5.5□□□□□ -1.53
CSDE1-207ENST00000483407 RPS19BP1Q86WX3 136 aaKnown RBP5.5□□□□□ -1.53
CSDE1-207ENST00000483407 PALM2Q8IXS6 379 aa5.5□□□□□ -1.53
CSDE1-207ENST00000483407 LRRC56Q8IYG6 542 aaPredicted RBP5.5□□□□□ -1.53
CSDE1-207ENST00000483407 TBC1D19Q8N5T2 526 aa5.5□□□□□ -1.53
CSDE1-207ENST00000483407 PRELID2Q8N945 189 aa5.5□□□□□ -1.53
CSDE1-207ENST00000483407 POGLUT1Q8NBL1 392 aa5.5□□□□□ -1.53
CSDE1-207ENST00000483407 PLPP5Q8NEB5 264 aa5.5□□□□□ -1.53
CSDE1-207ENST00000483407 ZCCHC10Q8TBK6 192 aa5.5□□□□□ -1.53
CSDE1-207ENST00000483407 CALML6Q8TD86 181 aa5.5□□□□□ -1.53
CSDE1-207ENST00000483407 SLC13A3Q8WWT9 602 aa5.5□□□□□ -1.53
CSDE1-207ENST00000483407 TMEM125Q96AQ2 219 aa5.5□□□□□ -1.53
CSDE1-207ENST00000483407 SDCCAG3Q96C92 435 aa5.5□□□□□ -1.53
CSDE1-207ENST00000483407 CCDC138Q96M89 665 aa5.5□□□□□ -1.53
CSDE1-207ENST00000483407 OLFM1Q99784 485 aa5.5□□□□□ -1.53
CSDE1-207ENST00000483407 VKORC1Q9BQB6 163 aa5.5□□□□□ -1.53
CSDE1-207ENST00000483407 DESI2Q9BSY9 194 aa5.5□□□□□ -1.53
CSDE1-207ENST00000483407 HES7Q9BYE0 225 aa5.5□□□□□ -1.53
CSDE1-207ENST00000483407 CDCP1Q9H5V8 836 aa5.5□□□□□ -1.53
CSDE1-207ENST00000483407 MCCC2Q9HCC0 563 aa5.5□□□□□ -1.53
CSDE1-207ENST00000483407 GALNT8Q9NY28 637 aa5.5□□□□□ -1.53
CSDE1-207ENST00000483407 GALPQ9UBC7 116 aa5.5□□□□□ -1.53
CSDE1-207ENST00000483407 DHRS7Q9Y394 339 aa5.5□□□□□ -1.53
CSDE1-207ENST00000483407 NAALAD2Q9Y3Q0 740 aa5.5□□□□□ -1.53
CSDE1-207ENST00000483407 SLC22A7Q9Y694 548 aa5.5□□□□□ -1.53
CSDE1-207ENST00000483407 COMMD10Q9Y6G5 202 aa5.5□□□□□ -1.53
CSDE1-207ENST00000483407 CCDC88CQ9P219 2028 aa5.5□□□□□ -1.53
CSDE1-207ENST00000483407 NUP210LQ5VU65 1888 aa5.49□□□□□ -1.53
CSDE1-207ENST00000483407 DOCK10Q96BY6 2186 aa5.49□□□□□ -1.53
CSDE1-207ENST00000483407 FAM237BA0A1B0GVD1 139 aa5.49□□□□□ -1.53
CSDE1-207ENST00000483407 OR2W5A6NFC9 320 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms