RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 NSDHLQ15738 373 aa16.77■□□□□ 0.27
CPNE1-224ENST00000483359 C16orf78Q8WTQ4 265 aa16.77■□□□□ 0.27
CPNE1-224ENST00000483359 GFM2Q969S9 779 aaKnown RBP16.77■□□□□ 0.27
CPNE1-224ENST00000483359 EGLN2Q96KS0 407 aa16.77■□□□□ 0.27
CPNE1-224ENST00000483359 NECTIN3Q9NQS3 549 aa16.77■□□□□ 0.27
CPNE1-224ENST00000483359 BAIAP2L1Q9UHR4 511 aa16.77■□□□□ 0.27
CPNE1-224ENST00000483359 MAP1BP46821 2468 aaKnown RBP16.76■□□□□ 0.27
CPNE1-224ENST00000483359 IGHV3-20A0A0C4DH32 117 aa16.76■□□□□ 0.27
CPNE1-224ENST00000483359 ZNF891A8MT65 544 aaPredicted RBP16.76■□□□□ 0.27
CPNE1-224ENST00000483359 CLDN4O14493 209 aa16.76■□□□□ 0.27
CPNE1-224ENST00000483359 ALOX12BO75342 701 aa16.76■□□□□ 0.27
CPNE1-224ENST00000483359 AQP5P55064 265 aa16.76■□□□□ 0.27
CPNE1-224ENST00000483359 MC1RQ01726 317 aa16.76■□□□□ 0.27
CPNE1-224ENST00000483359 EEF1A2Q05639 463 aaKnown RBP16.76■□□□□ 0.27
CPNE1-224ENST00000483359 SSPNQ14714 243 aa16.76■□□□□ 0.27
CPNE1-224ENST00000483359 FAM180BQ6P0A1 224 aa16.76■□□□□ 0.27
CPNE1-224ENST00000483359 QSOX2Q6ZRP7 698 aa16.76■□□□□ 0.27
CPNE1-224ENST00000483359 TMEM132CQ8N3T6 1108 aa16.76■□□□□ 0.27
CPNE1-224ENST00000483359 METTL21AQ8WXB1 218 aa16.76■□□□□ 0.27
CPNE1-224ENST00000483359 EBF4Q9BQW3 602 aa16.76■□□□□ 0.27
CPNE1-224ENST00000483359 CCDC134Q9H6E4 229 aa16.76■□□□□ 0.27
CPNE1-224ENST00000483359 WDR41Q9HAD4 459 aa16.76■□□□□ 0.27
CPNE1-224ENST00000483359 SEMA3GQ9NS98 782 aa16.76■□□□□ 0.27
CPNE1-224ENST00000483359 SIRT5Q9NXA8 310 aa16.76■□□□□ 0.27
CPNE1-224ENST00000483359 SSUH2Q9Y2M2 353 aa16.76■□□□□ 0.27
CPNE1-224ENST00000483359 TMED5Q9Y3A6 229 aa16.76■□□□□ 0.27
CPNE1-224ENST00000483359 HS3ST3B1Q9Y662 390 aa16.76■□□□□ 0.27
CPNE1-224ENST00000483359 TGFBR3LH3BV60 316 aa16.75■□□□□ 0.27
CPNE1-224ENST00000483359 PGRMC2O15173 223 aa16.75■□□□□ 0.27
CPNE1-224ENST00000483359 FGF17O60258 216 aa16.75■□□□□ 0.27
CPNE1-224ENST00000483359 LRATO95237 230 aa16.75■□□□□ 0.27
CPNE1-224ENST00000483359 MMP11P24347 488 aa16.75■□□□□ 0.27
CPNE1-224ENST00000483359 TMPRSS3P57727 454 aa16.75■□□□□ 0.27
CPNE1-224ENST00000483359 CDC20Q12834 499 aa16.75■□□□□ 0.27
CPNE1-224ENST00000483359 IL23RQ5VWK5 629 aa16.75■□□□□ 0.27
CPNE1-224ENST00000483359 PPP1R32Q7Z5V6 425 aa16.75■□□□□ 0.27
CPNE1-224ENST00000483359 ZNF595Q8IYB9 648 aa16.75■□□□□ 0.27
CPNE1-224ENST00000483359 LRRC34Q8IZ02 419 aa16.75■□□□□ 0.27
CPNE1-224ENST00000483359 LIX1Q8N485 282 aa16.75■□□□□ 0.27
CPNE1-224ENST00000483359 ZSCAN1Q8NBB4 408 aa16.75■□□□□ 0.27
CPNE1-224ENST00000483359 CRELD1Q96HD1 420 aa16.75■□□□□ 0.27
CPNE1-224ENST00000483359 METTL2AQ96IZ6 378 aaKnown RBP16.75■□□□□ 0.27
CPNE1-224ENST00000483359 OR52B2Q96RD2 323 aa16.75■□□□□ 0.27
CPNE1-224ENST00000483359 FAM117AQ9C073 453 aa16.75■□□□□ 0.27
CPNE1-224ENST00000483359 PRDM9Q9NQV7 894 aa16.75■□□□□ 0.27
CPNE1-224ENST00000483359 HEY2Q9UBP5 337 aa16.75■□□□□ 0.27
CPNE1-224ENST00000483359 DCTN4Q9UJW0 460 aa16.75■□□□□ 0.27
CPNE1-224ENST00000483359 PCSK5Q92824 1860 aa16.75■□□□□ 0.27
CPNE1-224ENST00000483359 SRRM3A6NNA2 597 aaPredicted RBP16.75■□□□□ 0.27
CPNE1-224ENST00000483359 MASP2O00187 686 aa16.75■□□□□ 0.27
CPNE1-224ENST00000483359 GUCY1B2O75343 617 aa16.75■□□□□ 0.27
CPNE1-224ENST00000483359 PRR35P0CG20 571 aa16.75■□□□□ 0.27
CPNE1-224ENST00000483359 BCKDHAP12694 445 aa16.75■□□□□ 0.27
CPNE1-224ENST00000483359 PPP2R1BP30154 601 aa16.75■□□□□ 0.27
CPNE1-224ENST00000483359 HSD17B7P56937 341 aa16.75■□□□□ 0.27
CPNE1-224ENST00000483359 CXADRP78310 365 aa16.75■□□□□ 0.27
CPNE1-224ENST00000483359 FOLH1Q04609 750 aa16.75■□□□□ 0.27
CPNE1-224ENST00000483359 STX4Q12846 297 aa16.75■□□□□ 0.27
CPNE1-224ENST00000483359 ATP1A4Q13733 1029 aa16.75■□□□□ 0.27
CPNE1-224ENST00000483359 PTGR1Q14914 329 aa16.75■□□□□ 0.27
CPNE1-224ENST00000483359 UGT8Q16880 541 aa16.75■□□□□ 0.27
CPNE1-224ENST00000483359 LARP4Q71RC2 724 aaKnown RBP eCLIP16.75■□□□□ 0.278e-24■□□□□ 9.5
CPNE1-224ENST00000483359 MRGPREQ86SM8 312 aa16.75■□□□□ 0.27
CPNE1-224ENST00000483359 RAB43Q86YS6 212 aa16.75■□□□□ 0.27
CPNE1-224ENST00000483359 SCUBE1Q8IWY4 988 aa16.75■□□□□ 0.27
CPNE1-224ENST00000483359 RFWD2Q8NHY2 731 aa16.75■□□□□ 0.27
CPNE1-224ENST00000483359 ADAMTS17Q8TE56 1095 aa16.75■□□□□ 0.27
CPNE1-224ENST00000483359 FCRL1Q96LA6 429 aa16.75■□□□□ 0.27
CPNE1-224ENST00000483359 FAIM2Q9BWQ8 316 aa16.75■□□□□ 0.27
CPNE1-224ENST00000483359 A0A1W2PS29 197 aa16.74■□□□□ 0.27
CPNE1-224ENST00000483359 SOCS6O14544 535 aa16.74■□□□□ 0.27
CPNE1-224ENST00000483359 LBPP18428 481 aa16.74■□□□□ 0.27
CPNE1-224ENST00000483359 MAPK1P28482 360 aa16.74■□□□□ 0.27
CPNE1-224ENST00000483359 DIO3P55073 304 aa16.74■□□□□ 0.27
CPNE1-224ENST00000483359 TRA2BP62995 288 aaKnown RBP16.74■□□□□ 0.27
CPNE1-224ENST00000483359 ERVK-8P63133 956 aa16.74■□□□□ 0.27
CPNE1-224ENST00000483359 C2orf80Q0P641 193 aa16.74■□□□□ 0.27
CPNE1-224ENST00000483359 OR52E8Q6IFG1 317 aa16.74■□□□□ 0.27
CPNE1-224ENST00000483359 EPGNQ6UW88 154 aa16.74■□□□□ 0.27
CPNE1-224ENST00000483359 AMER2Q8N7J2 671 aa16.74■□□□□ 0.27
CPNE1-224ENST00000483359 MARK4Q96L34 752 aa16.74■□□□□ 0.27
CPNE1-224ENST00000483359 EIF3LQ9Y262 564 aaKnown RBP16.74■□□□□ 0.27
CPNE1-224ENST00000483359 MMACHCQ9Y4U1 282 aa16.74■□□□□ 0.27
CPNE1-224ENST00000483359 PCDHA9Q9Y5H5 950 aa16.74■□□□□ 0.27
CPNE1-224ENST00000483359 C1orf226A1L170 272 aa16.73■□□□□ 0.27
CPNE1-224ENST00000483359 AKAP10O43572 662 aa16.73■□□□□ 0.27
CPNE1-224ENST00000483359 VPS4BO75351 444 aa16.73■□□□□ 0.27
CPNE1-224ENST00000483359 ERAL1O75616 437 aaKnown RBP16.73■□□□□ 0.27
CPNE1-224ENST00000483359 G6PDP11413 515 aa16.73■□□□□ 0.27
CPNE1-224ENST00000483359 ACPPP15309 386 aa16.73■□□□□ 0.27
CPNE1-224ENST00000483359 HEPACAMQ14CZ8 416 aa16.73■□□□□ 0.27
CPNE1-224ENST00000483359 ST3GAL2Q16842 350 aa16.73■□□□□ 0.27
CPNE1-224ENST00000483359 KIRREL2Q6UWL6 708 aa16.73■□□□□ 0.27
CPNE1-224ENST00000483359 ANKRD37Q7Z713 158 aa16.73■□□□□ 0.27
CPNE1-224ENST00000483359 MAELQ96JY0 434 aaKnown RBP16.73■□□□□ 0.27
CPNE1-224ENST00000483359 MYNNQ9NPC7 610 aa16.73■□□□□ 0.27
CPNE1-224ENST00000483359 FAM53CQ9NYF3 392 aa16.73■□□□□ 0.27
CPNE1-224ENST00000483359 NOP53Q9NZM5 478 aaKnown RBP16.73■□□□□ 0.27
CPNE1-224ENST00000483359 G3BP2Q9UN86 482 aaKnown RBP16.73■□□□□ 0.27
CPNE1-224ENST00000483359 CLDN16Q9Y5I7 305 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms