RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 PROM1O43490 865 aa12.45□□□□□ -0.42
HDAC1-208ENST00000482310 ABCB7O75027 752 aa12.45□□□□□ -0.42
HDAC1-208ENST00000482310 VPS4BO75351 444 aa12.45□□□□□ -0.42
HDAC1-208ENST00000482310 UMODP07911 640 aa12.45□□□□□ -0.42
HDAC1-208ENST00000482310 ALDOCP09972 364 aaKnown RBP12.45□□□□□ -0.42
HDAC1-208ENST00000482310 RAB40ALP0C0E4 278 aa12.45□□□□□ -0.42
HDAC1-208ENST00000482310 G6PDP11413 515 aa12.45□□□□□ -0.42
HDAC1-208ENST00000482310 BCKDHAP12694 445 aa12.45□□□□□ -0.42
HDAC1-208ENST00000482310 WT1P19544 449 aaPredicted RBP12.45□□□□□ -0.42
HDAC1-208ENST00000482310 JAK1P23458 1154 aa12.45□□□□□ -0.42
HDAC1-208ENST00000482310 MAPK1P28482 360 aa12.45□□□□□ -0.42
HDAC1-208ENST00000482310 TLX1P31314 330 aaPredicted RBP12.45□□□□□ -0.42
HDAC1-208ENST00000482310 ARFIP1P53367 373 aa12.45□□□□□ -0.42
HDAC1-208ENST00000482310 EMP2P54851 167 aa12.45□□□□□ -0.42
HDAC1-208ENST00000482310 DIO3P55073 304 aa12.45□□□□□ -0.42
HDAC1-208ENST00000482310 ERVK-8P63133 956 aa12.45□□□□□ -0.42
HDAC1-208ENST00000482310 EEF1A2Q05639 463 aaKnown RBP12.45□□□□□ -0.42
HDAC1-208ENST00000482310 PTGR1Q14914 329 aa12.45□□□□□ -0.42
HDAC1-208ENST00000482310 LSM12Q3MHD2 195 aaKnown RBP12.45□□□□□ -0.42
HDAC1-208ENST00000482310 LANCL3Q6ZV70 420 aa12.45□□□□□ -0.42
HDAC1-208ENST00000482310 LARP4Q71RC2 724 aaKnown RBP eCLIP12.45□□□□□ -0.42
HDAC1-208ENST00000482310 SPACA3Q8IXA5 215 aa12.45□□□□□ -0.42
HDAC1-208ENST00000482310 TMEM132CQ8N3T6 1108 aa12.45□□□□□ -0.42
HDAC1-208ENST00000482310 OR2Y1Q8NGV0 311 aa12.45□□□□□ -0.42
HDAC1-208ENST00000482310 NUDT8Q8WV74 236 aa12.45□□□□□ -0.42
HDAC1-208ENST00000482310 C8orf44Q96CB5 159 aa12.45□□□□□ -0.42
HDAC1-208ENST00000482310 PTCHD1Q96NR3 888 aa12.45□□□□□ -0.42
HDAC1-208ENST00000482310 OR1F2PQ96R84 312 aa12.45□□□□□ -0.42
HDAC1-208ENST00000482310 RPF2Q9H7B2 306 aaKnown RBP12.45□□□□□ -0.42
HDAC1-208ENST00000482310 WDR41Q9HAD4 459 aa12.45□□□□□ -0.42
HDAC1-208ENST00000482310 TCF7L2Q9NQB0 619 aa12.45□□□□□ -0.42
HDAC1-208ENST00000482310 LANCL2Q9NS86 450 aa12.45□□□□□ -0.42
HDAC1-208ENST00000482310 C14orf105Q9NVL8 296 aa12.45□□□□□ -0.42
HDAC1-208ENST00000482310 NOP53Q9NZM5 478 aaKnown RBP12.45□□□□□ -0.42
HDAC1-208ENST00000482310 HEY2Q9UBP5 337 aa12.45□□□□□ -0.42
HDAC1-208ENST00000482310 MRPS33Q9Y291 106 aaKnown RBP12.45□□□□□ -0.42
HDAC1-208ENST00000482310 DOCK10Q96BY6 2186 aa12.45□□□□□ -0.42
HDAC1-208ENST00000482310 IGLV3-12A0A075B6K2 115 aa12.44□□□□□ -0.42
HDAC1-208ENST00000482310 IGHV3-20A0A0C4DH32 117 aa12.44□□□□□ -0.42
HDAC1-208ENST00000482310 A0A1W2PS29 197 aa12.44□□□□□ -0.42
HDAC1-208ENST00000482310 CDC14CA4D256 554 aa12.44□□□□□ -0.42
HDAC1-208ENST00000482310 VSTM2BA6NLU5 285 aa12.44□□□□□ -0.42
HDAC1-208ENST00000482310 C9JVG2 144 aa12.44□□□□□ -0.42
HDAC1-208ENST00000482310 TERTO14746 1132 aaKnown RBP12.44□□□□□ -0.42
HDAC1-208ENST00000482310 PGRMC2O15173 223 aa12.44□□□□□ -0.42
HDAC1-208ENST00000482310 RRP8O43159 456 aaKnown RBP12.44□□□□□ -0.42
HDAC1-208ENST00000482310 PRMT3O60678 531 aa12.44□□□□□ -0.42
HDAC1-208ENST00000482310 ALOX12BO75342 701 aa12.44□□□□□ -0.42
HDAC1-208ENST00000482310 ERAL1O75616 437 aaKnown RBP12.44□□□□□ -0.42
HDAC1-208ENST00000482310 KLF7O75840 302 aaPredicted RBP12.44□□□□□ -0.42
HDAC1-208ENST00000482310 ONECUT2O95948 504 aa12.44□□□□□ -0.42
HDAC1-208ENST00000482310 ALBP02768 609 aa12.44□□□□□ -0.42
HDAC1-208ENST00000482310 PRR35P0CG20 571 aa12.44□□□□□ -0.42
HDAC1-208ENST00000482310 C8orf89P0DMQ9 161 aa12.44□□□□□ -0.42
HDAC1-208ENST00000482310 ALOX15P16050 662 aaPredicted RBP12.44□□□□□ -0.42
HDAC1-208ENST00000482310 PTGER1P34995 402 aa12.44□□□□□ -0.42
HDAC1-208ENST00000482310 MAD2L1Q13257 205 aaPredicted RBP12.44□□□□□ -0.42
HDAC1-208ENST00000482310 TUBB8Q3ZCM7 444 aa12.44□□□□□ -0.42
HDAC1-208ENST00000482310 CPLX4Q7Z7G2 160 aa12.44□□□□□ -0.42
HDAC1-208ENST00000482310 HOMEZQ8IX15 550 aa12.44□□□□□ -0.42
HDAC1-208ENST00000482310 KRTCAP2Q8N6L1 136 aa12.44□□□□□ -0.42
HDAC1-208ENST00000482310 AMER2Q8N7J2 671 aa12.44□□□□□ -0.42
HDAC1-208ENST00000482310 ADAMTS18Q8TE60 1221 aa12.44□□□□□ -0.42
HDAC1-208ENST00000482310 DOK4Q8TEW6 326 aa12.44□□□□□ -0.42
HDAC1-208ENST00000482310 EXOSC8Q96B26 276 aaKnown RBP12.44□□□□□ -0.42
HDAC1-208ENST00000482310 KLHL29Q96CT2 875 aa12.44□□□□□ -0.42
HDAC1-208ENST00000482310 C11orf24Q96F05 449 aaPredicted RBP12.44□□□□□ -0.42
HDAC1-208ENST00000482310 ELAC2Q9BQ52 826 aaKnown RBP12.44□□□□□ -0.42
HDAC1-208ENST00000482310 FAIM2Q9BWQ8 316 aa12.44□□□□□ -0.42
HDAC1-208ENST00000482310 GPR87Q9BY21 358 aa12.44□□□□□ -0.42
HDAC1-208ENST00000482310 NSRP1Q9H0G5 558 aaKnown RBP12.44□□□□□ -0.42
HDAC1-208ENST00000482310 SLC26A1Q9H2B4 701 aa12.44□□□□□ -0.42
HDAC1-208ENST00000482310 WDR54Q9H977 334 aa12.44□□□□□ -0.42
HDAC1-208ENST00000482310 NECTIN3Q9NQS3 549 aa12.44□□□□□ -0.42
HDAC1-208ENST00000482310 DKK4Q9UBT3 224 aa12.44□□□□□ -0.42
HDAC1-208ENST00000482310 KCND3Q9UK17 655 aa12.44□□□□□ -0.42
HDAC1-208ENST00000482310 NXT1Q9UKK6 140 aaKnown RBP12.44□□□□□ -0.42
HDAC1-208ENST00000482310 TMED5Q9Y3A6 229 aa12.44□□□□□ -0.42
HDAC1-208ENST00000482310 FASNP49327 2511 aaKnown RBP12.44□□□□□ -0.42
HDAC1-208ENST00000482310 MED13Q9UHV7 2174 aa12.43□□□□□ -0.42
HDAC1-208ENST00000482310 GMNCA6NCL1 334 aa12.43□□□□□ -0.42
HDAC1-208ENST00000482310 NPIPB8E9PQR5 432 aa12.43□□□□□ -0.42
HDAC1-208ENST00000482310 TGFBR3LH3BV60 316 aa12.43□□□□□ -0.42
HDAC1-208ENST00000482310 MASP2O00187 686 aa12.43□□□□□ -0.42
HDAC1-208ENST00000482310 CLDN4O14493 209 aa12.43□□□□□ -0.42
HDAC1-208ENST00000482310 FGF17O60258 216 aa12.43□□□□□ -0.42
HDAC1-208ENST00000482310 GUCY1B2O75343 617 aa12.43□□□□□ -0.42
HDAC1-208ENST00000482310 CREG1O75629 220 aa12.43□□□□□ -0.42
HDAC1-208ENST00000482310 TGDSO95455 350 aa12.43□□□□□ -0.42
HDAC1-208ENST00000482310 RECKO95980 971 aa12.43□□□□□ -0.42
HDAC1-208ENST00000482310 EFNA1P20827 205 aaPredicted RBP12.43□□□□□ -0.42
HDAC1-208ENST00000482310 ITPKBP27987 946 aa12.43□□□□□ -0.42
HDAC1-208ENST00000482310 PPP2R1BP30154 601 aa12.43□□□□□ -0.42
HDAC1-208ENST00000482310 ARFIP2P53365 341 aa12.43□□□□□ -0.42
HDAC1-208ENST00000482310 RHAGQ02094 409 aa12.43□□□□□ -0.42
HDAC1-208ENST00000482310 FOLH1Q04609 750 aa12.43□□□□□ -0.42
HDAC1-208ENST00000482310 EMX2Q04743 252 aa12.43□□□□□ -0.42
HDAC1-208ENST00000482310 STX4Q12846 297 aa12.43□□□□□ -0.42
HDAC1-208ENST00000482310 NSDHLQ15738 373 aa12.43□□□□□ -0.42
HDAC1-208ENST00000482310 ZNF750Q32MQ0 723 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms