RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 SLC25A53Q5H9E4 307 aa3.87□□□□□ -1.79
VPS41-212ENST00000482217 LRRC8EQ6NSJ5 796 aa3.87□□□□□ -1.79
VPS41-212ENST00000482217 C1orf94Q6P1W5 598 aa3.87□□□□□ -1.79
VPS41-212ENST00000482217 FAM198BQ6UWH4 519 aa3.87□□□□□ -1.79
VPS41-212ENST00000482217 HSDL2Q6YN16 418 aa3.87□□□□□ -1.79
VPS41-212ENST00000482217 SIGLEC15Q6ZMC9 328 aa3.87□□□□□ -1.79
VPS41-212ENST00000482217 DET1Q7L5Y6 550 aa3.87□□□□□ -1.79
VPS41-212ENST00000482217 TRPM8Q7Z2W7 1104 aa3.87□□□□□ -1.79
VPS41-212ENST00000482217 RD3Q7Z3Z2 195 aa3.87□□□□□ -1.79
VPS41-212ENST00000482217 TSPAN33Q86UF1 283 aa3.87□□□□□ -1.79
VPS41-212ENST00000482217 HAPLN4Q86UW8 402 aa3.87□□□□□ -1.79
VPS41-212ENST00000482217 CATSPERDQ86XM0 798 aa3.87□□□□□ -1.79
VPS41-212ENST00000482217 PLCZ1Q86YW0 608 aa3.87□□□□□ -1.79
VPS41-212ENST00000482217 ST13P4Q8IZP2 240 aaPredicted RBP3.87□□□□□ -1.79
VPS41-212ENST00000482217 CYB561A3Q8NBI2 242 aa3.87□□□□□ -1.79
VPS41-212ENST00000482217 OR5M1Q8NGP8 315 aa3.87□□□□□ -1.79
VPS41-212ENST00000482217 TBC1D16Q8TBP0 767 aa3.87□□□□□ -1.79
VPS41-212ENST00000482217 TEX47Q8TBZ9 253 aa3.87□□□□□ -1.79
VPS41-212ENST00000482217 PNPT1Q8TCS8 783 aaKnown RBP3.87□□□□□ -1.79
VPS41-212ENST00000482217 ARNTL2Q8WYA1 636 aa3.87□□□□□ -1.79
VPS41-212ENST00000482217 IRGQQ8WZA9 623 aa3.87□□□□□ -1.79
VPS41-212ENST00000482217 ERLEC1Q96DZ1 483 aa3.87□□□□□ -1.79
VPS41-212ENST00000482217 SNF8Q96H20 258 aa3.87□□□□□ -1.79
VPS41-212ENST00000482217 TECTBQ96PL2 329 aa3.87□□□□□ -1.79
VPS41-212ENST00000482217 SH2D3AQ9BRG2 576 aa3.87□□□□□ -1.79
VPS41-212ENST00000482217 ABHD14AQ9BUJ0 271 aa3.87□□□□□ -1.79
VPS41-212ENST00000482217 NLNQ9BYT8 704 aa3.87□□□□□ -1.79
VPS41-212ENST00000482217 NMNAT2Q9BZQ4 307 aa3.87□□□□□ -1.79
VPS41-212ENST00000482217 R3HDMLQ9H3Y0 253 aa3.87□□□□□ -1.79
VPS41-212ENST00000482217 SLC40A1Q9NP59 571 aa3.87□□□□□ -1.79
VPS41-212ENST00000482217 MYNNQ9NPC7 610 aa3.87□□□□□ -1.79
VPS41-212ENST00000482217 ZNF302Q9NR11 478 aa3.87□□□□□ -1.79
VPS41-212ENST00000482217 MRPL22Q9NWU5 206 aaKnown RBP3.87□□□□□ -1.79
VPS41-212ENST00000482217 TAS2R14Q9NYV8 317 aa3.87□□□□□ -1.79
VPS41-212ENST00000482217 UPB1Q9UBR1 384 aa3.87□□□□□ -1.79
VPS41-212ENST00000482217 TUBGCP4Q9UGJ1 667 aa3.87□□□□□ -1.79
VPS41-212ENST00000482217 SLC7A8Q9UHI5 535 aa3.87□□□□□ -1.79
VPS41-212ENST00000482217 VANGL2Q9ULK5 521 aa3.87□□□□□ -1.79
VPS41-212ENST00000482217 SH3GLB1Q9Y371 365 aa3.87□□□□□ -1.79
VPS41-212ENST00000482217 PKP3Q9Y446 797 aa3.87□□□□□ -1.79
VPS41-212ENST00000482217 COX11Q9Y6N1 276 aa3.87□□□□□ -1.79
VPS41-212ENST00000482217 EMSYQ7Z589 1322 aa3.87□□□□□ -1.79
VPS41-212ENST00000482217 NCOA3Q9Y6Q9 1424 aa3.87□□□□□ -1.79
VPS41-212ENST00000482217 NEURL4Q96JN8 1562 aa3.86□□□□□ -1.79
VPS41-212ENST00000482217 TRAV26-1A0A087WT03 109 aa3.86□□□□□ -1.79
VPS41-212ENST00000482217 OR6C70A6NIJ9 312 aa3.86□□□□□ -1.79
VPS41-212ENST00000482217 DUXAA6NLW8 204 aa3.86□□□□□ -1.79
VPS41-212ENST00000482217 PDZK1P1A8MUH7 402 aa3.86□□□□□ -1.79
VPS41-212ENST00000482217 MCIDASD6RGH6 385 aa3.86□□□□□ -1.79
VPS41-212ENST00000482217 SLC28A1O00337 649 aa3.86□□□□□ -1.79
VPS41-212ENST00000482217 ITGB1BP1O14713 200 aa3.86□□□□□ -1.79
VPS41-212ENST00000482217 RRHO14718 337 aa3.86□□□□□ -1.79
VPS41-212ENST00000482217 ARPC3O15145 178 aa3.86□□□□□ -1.79
VPS41-212ENST00000482217 CYTH3O43739 400 aa3.86□□□□□ -1.79
VPS41-212ENST00000482217 GLRA3O75311 464 aa3.86□□□□□ -1.79
VPS41-212ENST00000482217 CIAO1O76071 339 aa3.86□□□□□ -1.79
VPS41-212ENST00000482217 STBD1O95210 358 aa3.86□□□□□ -1.79
VPS41-212ENST00000482217 OR6A2O95222 327 aa3.86□□□□□ -1.79
VPS41-212ENST00000482217 TFP02787 698 aa3.86□□□□□ -1.79
VPS41-212ENST00000482217 PRKCGP05129 697 aa3.86□□□□□ -1.79
VPS41-212ENST00000482217 LYNP07948 512 aa3.86□□□□□ -1.79
VPS41-212ENST00000482217 MMP10P09238 476 aa3.86□□□□□ -1.79
VPS41-212ENST00000482217 NUDT17P0C025 328 aa3.86□□□□□ -1.79
VPS41-212ENST00000482217 HSMCR30P0CW71 290 aa3.86□□□□□ -1.79
VPS41-212ENST00000482217 SPP1P10451 314 aa3.86□□□□□ -1.79
VPS41-212ENST00000482217 DARSP14868 501 aaKnown RBP3.86□□□□□ -1.79
VPS41-212ENST00000482217 ZNF44P15621 663 aa3.86□□□□□ -1.79
VPS41-212ENST00000482217 MX1P20591 662 aa3.86□□□□□ -1.79
VPS41-212ENST00000482217 MPZP25189 248 aa3.86□□□□□ -1.79
VPS41-212ENST00000482217 GABRA5P31644 462 aa3.86□□□□□ -1.79
VPS41-212ENST00000482217 MMP12P39900 470 aa3.86□□□□□ -1.79
VPS41-212ENST00000482217 CXCR3P49682 368 aa3.86□□□□□ -1.79
VPS41-212ENST00000482217 PSMD7P51665 324 aa3.86□□□□□ -1.79
VPS41-212ENST00000482217 GPR143P51810 404 aa3.86□□□□□ -1.79
VPS41-212ENST00000482217 ADPRHP54922 357 aa3.86□□□□□ -1.79
VPS41-212ENST00000482217 PROK1P58294 105 aa3.86□□□□□ -1.79
VPS41-212ENST00000482217 HSF1Q00613 529 aa3.86□□□□□ -1.79
VPS41-212ENST00000482217 KRTAP1-1Q07627 177 aa3.86□□□□□ -1.79
VPS41-212ENST00000482217 SF3B4Q15427 424 aaKnown RBP eCLIP3.86□□□□□ -1.793e-7■■■□□ 15.3
VPS41-212ENST00000482217 TRIP10Q15642 601 aa3.86□□□□□ -1.79
VPS41-212ENST00000482217 STXBP2Q15833 593 aa3.86□□□□□ -1.79
VPS41-212ENST00000482217 CARTPTQ16568 116 aa3.86□□□□□ -1.79
VPS41-212ENST00000482217 TPD52L1Q16890 204 aaPredicted RBP3.86□□□□□ -1.79
VPS41-212ENST00000482217 EXOC3L2Q2M3D2 409 aa3.86□□□□□ -1.79
VPS41-212ENST00000482217 DNAL1Q4LDG9 190 aa3.86□□□□□ -1.79
VPS41-212ENST00000482217 EOGTQ5NDL2 527 aa3.86□□□□□ -1.79
VPS41-212ENST00000482217 PDZK1Q5T2W1 519 aa3.86□□□□□ -1.79
VPS41-212ENST00000482217 SEL1L3Q68CR1 1132 aa3.86□□□□□ -1.79
VPS41-212ENST00000482217 SLC39A4Q6P5W5 647 aa3.86□□□□□ -1.79
VPS41-212ENST00000482217 ZNF474Q6S9Z5 364 aaPredicted RBP3.86□□□□□ -1.79
VPS41-212ENST00000482217 CBLN3Q6UW01 205 aa3.86□□□□□ -1.79
VPS41-212ENST00000482217 BTNL8Q6UX41 500 aa3.86□□□□□ -1.79
VPS41-212ENST00000482217 RBM44Q6ZP01 1051 aaKnown RBP3.86□□□□□ -1.79
VPS41-212ENST00000482217 ZNF788Q6ZQV5 615 aa3.86□□□□□ -1.79
VPS41-212ENST00000482217 NLRP9Q7RTR0 991 aa3.86□□□□□ -1.79
VPS41-212ENST00000482217 ADGRG3Q86Y34 549 aa3.86□□□□□ -1.79
VPS41-212ENST00000482217 STHQ8IWL8 128 aa3.86□□□□□ -1.79
VPS41-212ENST00000482217 LAX1Q8IWV1 398 aa3.86□□□□□ -1.79
VPS41-212ENST00000482217 C4orf19Q8IY42 314 aa3.86□□□□□ -1.79
VPS41-212ENST00000482217 MCOLN2Q8IZK6 566 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms