RNA–Protein interactions for RNA: ENST00000481849.5

HLA-B-253, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-253ENST00000481849 EXT2Q93063 718 aa8.38□□□□□ -1.07
HLA-B-253ENST00000481849 NCLNQ969V3 563 aa8.38□□□□□ -1.07
HLA-B-253ENST00000481849 ESAMQ96AP7 390 aa8.38□□□□□ -1.07
HLA-B-253ENST00000481849 MTFMTQ96DP5 389 aaKnown RBP8.38□□□□□ -1.07
HLA-B-253ENST00000481849 PDLIM5Q96HC4 596 aaKnown RBP8.38□□□□□ -1.07
HLA-B-253ENST00000481849 SMIM10Q96HG1 83 aa8.38□□□□□ -1.07
HLA-B-253ENST00000481849 LURAP1Q96LR2 239 aa8.38□□□□□ -1.07
HLA-B-253ENST00000481849 PRTFDC1Q9NRG1 225 aa8.38□□□□□ -1.07
HLA-B-253ENST00000481849 FOXD3Q9UJU5 478 aaPredicted RBP8.38□□□□□ -1.07
HLA-B-253ENST00000481849 PPT2Q9UMR5 302 aa8.38□□□□□ -1.07
HLA-B-253ENST00000481849 SNX24Q9Y343 169 aa8.38□□□□□ -1.07
HLA-B-253ENST00000481849 OARD1Q9Y530 152 aa8.38□□□□□ -1.07
HLA-B-253ENST00000481849 EFCAB8A8MWE9 144 aa8.37□□□□□ -1.07
HLA-B-253ENST00000481849 G3V3Y1 287 aa8.37□□□□□ -1.07
HLA-B-253ENST00000481849 CLGNO14967 610 aa8.37□□□□□ -1.07
HLA-B-253ENST00000481849 PHGDHO43175 533 aaKnown RBP8.37□□□□□ -1.07
HLA-B-253ENST00000481849 B3GALT2O43825 422 aa8.37□□□□□ -1.07
HLA-B-253ENST00000481849 PEX1O43933 1283 aa8.37□□□□□ -1.07
HLA-B-253ENST00000481849 PRKNO60260 465 aaPredicted RBP8.37□□□□□ -1.07
HLA-B-253ENST00000481849 SH3BGRLO75368 114 aa8.37□□□□□ -1.07
HLA-B-253ENST00000481849 ITGA10O75578 1167 aa8.37□□□□□ -1.07
HLA-B-253ENST00000481849 SEC31AO94979 1220 aaKnown RBP8.37□□□□□ -1.07
HLA-B-253ENST00000481849 IFNA16P05015 189 aa8.37□□□□□ -1.07
HLA-B-253ENST00000481849 GNAZP19086 355 aa8.37□□□□□ -1.07
HLA-B-253ENST00000481849 CERS1P27544 350 aa8.37□□□□□ -1.07
HLA-B-253ENST00000481849 TRHRP34981 398 aaPredicted RBP8.37□□□□□ -1.07
HLA-B-253ENST00000481849 KIR3DL1P43629 444 aa8.37□□□□□ -1.07
HLA-B-253ENST00000481849 SLC6A12P48065 614 aa8.37□□□□□ -1.07
HLA-B-253ENST00000481849 HNMTP50135 292 aa8.37□□□□□ -1.07
HLA-B-253ENST00000481849 CLCN2P51788 898 aa8.37□□□□□ -1.07
HLA-B-253ENST00000481849 NR0B1P51843 470 aaKnown RBP8.37□□□□□ -1.07
HLA-B-253ENST00000481849 HNRNPFP52597 415 aaKnown RBP8.37□□□□□ -1.07
HLA-B-253ENST00000481849 GNG11P61952 73 aa8.37□□□□□ -1.07
HLA-B-253ENST00000481849 BMPR2Q13873 1038 aa8.37□□□□□ -1.07
HLA-B-253ENST00000481849 CEP128Q6ZU80 1094 aa8.37□□□□□ -1.07
HLA-B-253ENST00000481849 SYDE1Q6ZW31 735 aaPredicted RBP8.37□□□□□ -1.07
HLA-B-253ENST00000481849 MDGA2Q7Z553 956 aa8.37□□□□□ -1.07
HLA-B-253ENST00000481849 ADAMTSL2Q86TH1 951 aa8.37□□□□□ -1.07
HLA-B-253ENST00000481849 CREG2Q8IUH2 290 aa8.37□□□□□ -1.07
HLA-B-253ENST00000481849 CHERPQ8IWX8 916 aaKnown RBP8.37□□□□□ -1.07
HLA-B-253ENST00000481849 SCUBE1Q8IWY4 988 aa8.37□□□□□ -1.07
HLA-B-253ENST00000481849 KLHDC8AQ8IYD2 350 aa8.37□□□□□ -1.07
HLA-B-253ENST00000481849 KRT78Q8N1N4 520 aa8.37□□□□□ -1.07
HLA-B-253ENST00000481849 APCDD1LQ8NCL9 501 aa8.37□□□□□ -1.07
HLA-B-253ENST00000481849 B3GNT7Q8NFL0 401 aa8.37□□□□□ -1.07
HLA-B-253ENST00000481849 FBLIM1Q8WUP2 373 aa8.37□□□□□ -1.07
HLA-B-253ENST00000481849 GAL3ST3Q96A11 431 aa8.37□□□□□ -1.07
HLA-B-253ENST00000481849 SDCCAG3Q96C92 435 aa8.37□□□□□ -1.07
HLA-B-253ENST00000481849 RHBDF1Q96CC6 855 aa8.37□□□□□ -1.07
HLA-B-253ENST00000481849 LRRC39Q96DD0 335 aa8.37□□□□□ -1.07
HLA-B-253ENST00000481849 MS4A6EQ96DS6 147 aa8.37□□□□□ -1.07
HLA-B-253ENST00000481849 VMP1Q96GC9 406 aa8.37□□□□□ -1.07
HLA-B-253ENST00000481849 VPS39Q96JC1 886 aa8.37□□□□□ -1.07
HLA-B-253ENST00000481849 CSF3RQ99062 836 aa8.37□□□□□ -1.07
HLA-B-253ENST00000481849 KRT12Q99456 494 aa8.37□□□□□ -1.07
HLA-B-253ENST00000481849 CCDC77Q9BR77 488 aa8.37□□□□□ -1.07
HLA-B-253ENST00000481849 TMEM79Q9BSE2 394 aa8.37□□□□□ -1.07
HLA-B-253ENST00000481849 TRIM8Q9BZR9 551 aa8.37□□□□□ -1.07
HLA-B-253ENST00000481849 BHLHE41Q9C0J9 482 aaPredicted RBP8.37□□□□□ -1.07
HLA-B-253ENST00000481849 REXO4Q9GZR2 422 aaKnown RBP8.37□□□□□ -1.07
HLA-B-253ENST00000481849 DEFB127Q9H1M4 99 aa8.37□□□□□ -1.07
HLA-B-253ENST00000481849 CLK4Q9HAZ1 481 aaKnown RBP8.37□□□□□ -1.07
HLA-B-253ENST00000481849 SMYD2Q9NRG4 433 aa8.37□□□□□ -1.07
HLA-B-253ENST00000481849 WWOXQ9NZC7 414 aa8.37□□□□□ -1.07
HLA-B-253ENST00000481849 KCMF1Q9P0J7 381 aa8.37□□□□□ -1.07
HLA-B-253ENST00000481849 ZNF223Q9UK11 482 aaPredicted RBP8.37□□□□□ -1.07
HLA-B-253ENST00000481849 ERVK-11Q9UQG0 969 aa8.37□□□□□ -1.07
HLA-B-253ENST00000481849 KLF13Q9Y2Y9 288 aaPredicted RBP8.37□□□□□ -1.07
HLA-B-253ENST00000481849 MTO1Q9Y2Z2 717 aaKnown RBP8.37□□□□□ -1.07
HLA-B-253ENST00000481849 MMACHCQ9Y4U1 282 aa8.37□□□□□ -1.07
HLA-B-253ENST00000481849 ASB1Q9Y576 335 aa8.37□□□□□ -1.07
HLA-B-253ENST00000481849 LRIT2A6NDA9 550 aa8.36□□□□□ -1.07
HLA-B-253ENST00000481849 ANKDD1BA6NHY2 528 aa8.36□□□□□ -1.07
HLA-B-253ENST00000481849 FAM166BA8MTA8 275 aa8.36□□□□□ -1.07
HLA-B-253ENST00000481849 CXorf49A8MYA2 514 aaPredicted RBP8.36□□□□□ -1.07
HLA-B-253ENST00000481849 KLRC4-KLRK1H3BQV0 150 aa8.36□□□□□ -1.07
HLA-B-253ENST00000481849 WWP2O00308 870 aa8.36□□□□□ -1.07
HLA-B-253ENST00000481849 CLDN4O14493 209 aa8.36□□□□□ -1.07
HLA-B-253ENST00000481849 ADAM10O14672 748 aa8.36□□□□□ -1.07
HLA-B-253ENST00000481849 TP73O15350 636 aa8.36□□□□□ -1.07
HLA-B-253ENST00000481849 TAPBPO15533 448 aa8.36□□□□□ -1.07
HLA-B-253ENST00000481849 OR2J2O76002 312 aa8.36□□□□□ -1.07
HLA-B-253ENST00000481849 CCDC166P0CW27 439 aa8.36□□□□□ -1.07
HLA-B-253ENST00000481849 FOSL1P15407 271 aa8.36□□□□□ -1.07
HLA-B-253ENST00000481849 AGAP20933 346 aa8.36□□□□□ -1.07
HLA-B-253ENST00000481849 PTGS2P35354 604 aa8.36□□□□□ -1.07
HLA-B-253ENST00000481849 RPL21P46778 160 aaKnown RBP8.36□□□□□ -1.07
HLA-B-253ENST00000481849 HSPA7P48741 367 aa8.36□□□□□ -1.07
HLA-B-253ENST00000481849 SSR4P51571 173 aa8.36□□□□□ -1.07
HLA-B-253ENST00000481849 HSD17B7P56937 341 aa8.36□□□□□ -1.07
HLA-B-253ENST00000481849 RAB38P57729 211 aa8.36□□□□□ -1.07
HLA-B-253ENST00000481849 KRTAP10-9P60411 292 aa8.36□□□□□ -1.07
HLA-B-253ENST00000481849 CDKL1Q00532 357 aa8.36□□□□□ -1.07
HLA-B-253ENST00000481849 PLGLB1Q02325 96 aa8.36□□□□□ -1.07
HLA-B-253ENST00000481849 ID2Q02363 134 aa8.36□□□□□ -1.07
HLA-B-253ENST00000481849 TGFBIQ15582 683 aa8.36□□□□□ -1.07
HLA-B-253ENST00000481849 XKR6Q5GH73 641 aa8.36□□□□□ -1.07
HLA-B-253ENST00000481849 IL20RBQ6UXL0 311 aa8.36□□□□□ -1.07
HLA-B-253ENST00000481849 GPSM1Q86YR5 675 aa8.36□□□□□ -1.07
HLA-B-253ENST00000481849 TTLQ8NG68 377 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms