RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 CDKL5O76039 1030 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 RGS11O94810 467 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 GJA1P17302 382 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 CR2P20023 1033 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 PIK3R1P27986 724 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 ENTPD1P49961 510 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 TMPRSS3P57727 454 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 GSTO1P78417 241 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 BDH1Q02338 343 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 CCL14Q16627 93 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 SYT14P1Q58G82 188 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 SP5Q6BEB4 398 aaPredicted RBP3.08□□□□□ -1.92
SMC6-208ENST00000481708 CES5AQ6NT32 575 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 TMEM71Q6P5X7 295 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 LRRC70Q7Z2Q7 622 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 EFL1Q7Z2Z2 1120 aaKnown RBP3.08□□□□□ -1.92
SMC6-208ENST00000481708 CCDC190Q86UF4 302 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 LUZP1Q86V48 1076 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 FAM114A1Q8IWE2 563 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 LRRC56Q8IYG6 542 aaPredicted RBP3.08□□□□□ -1.92
SMC6-208ENST00000481708 SLC7A5P1Q8MH63 180 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 EXD1Q8NHP7 514 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 RLN3Q8WXF3 142 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 RND1Q92730 232 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 HAS2Q92819 552 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 STAMBPL1Q96FJ0 436 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 TPD52L3Q96J77 140 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 RPGRIP1Q96KN7 1286 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 GNRHR2Q96P88 292 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 TEFMQ96QE5 360 aaKnown RBP3.08□□□□□ -1.92
SMC6-208ENST00000481708 FNDC11Q9BVV2 318 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 IFT27Q9BW83 186 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 TRIM9Q9C026 710 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 WWP1Q9H0M0 922 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 SPACA1Q9HBV2 294 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 VAT1LQ9HCJ6 419 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 HINT3Q9NQE9 182 aaKnown RBP3.08□□□□□ -1.92
SMC6-208ENST00000481708 STK39Q9UEW8 545 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 RHBDD3Q9Y3P4 386 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 A0A1W2PP11 408 aa3.07□□□□□ -1.92
SMC6-208ENST00000481708 MAGEB16A2A368 324 aa3.07□□□□□ -1.92
SMC6-208ENST00000481708 C5orf60A6NFR6 353 aa3.07□□□□□ -1.92
SMC6-208ENST00000481708 OVOL3O00110 214 aa3.07□□□□□ -1.92
SMC6-208ENST00000481708 UNGP13051 313 aaPredicted RBP3.07□□□□□ -1.92
SMC6-208ENST00000481708 HNRNPH3P31942 346 aaKnown RBP3.07□□□□□ -1.92
SMC6-208ENST00000481708 CSTF2P33240 577 aaKnown RBP eCLIP3.07□□□□□ -1.92
SMC6-208ENST00000481708 CCR4P51679 360 aa3.07□□□□□ -1.92
SMC6-208ENST00000481708 PIP5KL1Q5T9C9 394 aa3.07□□□□□ -1.92
SMC6-208ENST00000481708 ARMC12Q5T9G4 340 aa3.07□□□□□ -1.92
SMC6-208ENST00000481708 CAPN13Q6MZZ7 669 aaPredicted RBP3.07□□□□□ -1.92
SMC6-208ENST00000481708 MFSD12Q6NUT3 480 aa3.07□□□□□ -1.92
SMC6-208ENST00000481708 MEX3DQ86XN8 651 aaKnown RBP3.07□□□□□ -1.92
SMC6-208ENST00000481708 KATNAL2Q8IYT4 538 aa3.07□□□□□ -1.92
SMC6-208ENST00000481708 SLC38A9Q8NBW4 561 aa3.07□□□□□ -1.92
SMC6-208ENST00000481708 VN1R2Q8NFZ6 395 aa3.07□□□□□ -1.92
SMC6-208ENST00000481708 FKBP10Q96AY3 582 aa3.07□□□□□ -1.92
SMC6-208ENST00000481708 ANKRD27Q96NW4 1050 aa3.07□□□□□ -1.92
SMC6-208ENST00000481708 PRMT1Q99873 361 aaKnown RBP3.07□□□□□ -1.92
SMC6-208ENST00000481708 TMEM43Q9BTV4 400 aa3.07□□□□□ -1.92
SMC6-208ENST00000481708 RNF26Q9BY78 433 aaPredicted RBP3.07□□□□□ -1.92
SMC6-208ENST00000481708 NMNAT2Q9BZQ4 307 aa3.07□□□□□ -1.92
SMC6-208ENST00000481708 STMN4Q9H169 189 aaPredicted RBP3.07□□□□□ -1.92
SMC6-208ENST00000481708 ACTR5Q9H9F9 607 aaPredicted RBP3.07□□□□□ -1.92
SMC6-208ENST00000481708 APMAPQ9HDC9 416 aa3.07□□□□□ -1.92
SMC6-208ENST00000481708 MIS18AQ9NYP9 233 aa3.07□□□□□ -1.92
SMC6-208ENST00000481708 IFT52Q9Y366 437 aa3.07□□□□□ -1.92
SMC6-208ENST00000481708 TMED7Q9Y3B3 224 aa3.07□□□□□ -1.92
SMC6-208ENST00000481708 SLC22A23A1A5C7 686 aa3.07□□□□□ -1.92
SMC6-208ENST00000481708 NEMP2A6NFY4 417 aa3.07□□□□□ -1.92
SMC6-208ENST00000481708 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.07□□□□□ -1.92
SMC6-208ENST00000481708 RFXAPO00287 272 aa3.07□□□□□ -1.92
SMC6-208ENST00000481708 CIDEAO60543 219 aa3.07□□□□□ -1.92
SMC6-208ENST00000481708 FCMRO60667 390 aa3.07□□□□□ -1.92
SMC6-208ENST00000481708 TGM6O95932 706 aa3.07□□□□□ -1.92
SMC6-208ENST00000481708 GAPDHP04406 335 aaKnown RBP3.07□□□□□ -1.92
SMC6-208ENST00000481708 AKR1A1P14550 325 aa3.07□□□□□ -1.92
SMC6-208ENST00000481708 SRD5A2P31213 254 aa3.07□□□□□ -1.92
SMC6-208ENST00000481708 ABCG1P45844 678 aa3.07□□□□□ -1.92
SMC6-208ENST00000481708 STARP49675 285 aa3.07□□□□□ -1.92
SMC6-208ENST00000481708 SLC26A2P50443 739 aa3.07□□□□□ -1.92
SMC6-208ENST00000481708 SEC61GP60059 68 aa3.07□□□□□ -1.92
SMC6-208ENST00000481708 SIGLEC14Q08ET2 396 aa3.07□□□□□ -1.92
SMC6-208ENST00000481708 EFEMP1Q12805 493 aa3.07□□□□□ -1.92
SMC6-208ENST00000481708 GRM7Q14831 915 aa3.07□□□□□ -1.92
SMC6-208ENST00000481708 MEP1AQ16819 746 aa3.07□□□□□ -1.92
SMC6-208ENST00000481708 ZC2HC1CQ53FD0 456 aaPredicted RBP3.07□□□□□ -1.92
SMC6-208ENST00000481708 PHLDA2Q53GA4 152 aa3.07□□□□□ -1.92
SMC6-208ENST00000481708 FAM76BQ5HYJ3 339 aa3.07□□□□□ -1.92
SMC6-208ENST00000481708 ZNF618Q5T7W0 954 aa3.07□□□□□ -1.92
SMC6-208ENST00000481708 KCNMB4Q86W47 210 aa3.07□□□□□ -1.92
SMC6-208ENST00000481708 OR52I2Q8NH67 350 aa3.07□□□□□ -1.92
SMC6-208ENST00000481708 ARRDC2Q8TBH0 407 aa3.07□□□□□ -1.92
SMC6-208ENST00000481708 DNAJA4Q8WW22 397 aaPredicted RBP3.07□□□□□ -1.92
SMC6-208ENST00000481708 SLC44A1Q8WWI5 657 aa3.07□□□□□ -1.92
SMC6-208ENST00000481708 PIGCQ92535 297 aa3.07□□□□□ -1.92
SMC6-208ENST00000481708 P2RY11Q96G91 374 aa3.07□□□□□ -1.92
SMC6-208ENST00000481708 NUDCD1Q96RS6 583 aa3.07□□□□□ -1.92
SMC6-208ENST00000481708 C12orf65Q9H3J6 166 aaKnown RBP3.07□□□□□ -1.92
SMC6-208ENST00000481708 LRRC4Q9HBW1 653 aa3.07□□□□□ -1.92
SMC6-208ENST00000481708 CHMP1AQ9HD42 196 aaPredicted RBP3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms