RNA–Protein interactions for RNA: ENST00000481522.1

COPA-204, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-204ENST00000481522 KRT2P35908 639 aa3.09□□□□□ -1.91
COPA-204ENST00000481522 NAGLUP54802 743 aa3.09□□□□□ -1.91
COPA-204ENST00000481522 MFAP3P55082 362 aa3.09□□□□□ -1.91
COPA-204ENST00000481522 XGP55808 180 aa3.09□□□□□ -1.91
COPA-204ENST00000481522 CSNK2BP67870 215 aa3.09□□□□□ -1.91
COPA-204ENST00000481522 CDH18Q13634 790 aa3.09□□□□□ -1.91
COPA-204ENST00000481522 TMEM132DQ14C87 1099 aa3.09□□□□□ -1.91
COPA-204ENST00000481522 TAB1Q15750 504 aa3.09□□□□□ -1.91
COPA-204ENST00000481522 FASTKD1Q53R41 847 aaKnown RBP3.09□□□□□ -1.91
COPA-204ENST00000481522 SPOUT1Q5T280 376 aaKnown RBP3.09□□□□□ -1.91
COPA-204ENST00000481522 SUSD4Q5VX71 490 aa3.09□□□□□ -1.91
COPA-204ENST00000481522 SHEQ5VZ18 495 aa3.09□□□□□ -1.91
COPA-204ENST00000481522 NOTUMQ6P988 496 aa3.09□□□□□ -1.91
COPA-204ENST00000481522 METTL23Q86XA0 190 aa3.09□□□□□ -1.91
COPA-204ENST00000481522 LYG1Q8N1E2 194 aa3.09□□□□□ -1.91
COPA-204ENST00000481522 LRTM2Q8N967 370 aa3.09□□□□□ -1.91
COPA-204ENST00000481522 OR5T2Q8NGG2 359 aa3.09□□□□□ -1.91
COPA-204ENST00000481522 OR4C15Q8NGM1 316 aa3.09□□□□□ -1.91
COPA-204ENST00000481522 GRK7Q8WTQ7 553 aa3.09□□□□□ -1.91
COPA-204ENST00000481522 RAD54LQ92698 747 aa3.09□□□□□ -1.91
COPA-204ENST00000481522 P2RX5Q93086 422 aa3.09□□□□□ -1.91
COPA-204ENST00000481522 CDK19Q9BWU1 502 aa3.09□□□□□ -1.91
COPA-204ENST00000481522 WWTR1Q9GZV5 400 aa3.09□□□□□ -1.91
COPA-204ENST00000481522 UPF3AQ9H1J1 476 aaKnown RBP3.09□□□□□ -1.91
COPA-204ENST00000481522 RIMS4Q9H426 269 aaPredicted RBP3.09□□□□□ -1.91
COPA-204ENST00000481522 MED20Q9H944 212 aa3.09□□□□□ -1.91
COPA-204ENST00000481522 PAK5Q9P286 719 aa3.09□□□□□ -1.91
COPA-204ENST00000481522 IL36AQ9UHA7 158 aa3.09□□□□□ -1.91
COPA-204ENST00000481522 ELF5Q9UKW6 265 aaPredicted RBP3.09□□□□□ -1.91
COPA-204ENST00000481522 PA2G4Q9UQ80 394 aaKnown RBP3.09□□□□□ -1.91
COPA-204ENST00000481522 CSNK1G3Q9Y6M4 447 aa3.09□□□□□ -1.91
COPA-204ENST00000481522 NSD1Q96L73 2696 aaPredicted RBP3.09□□□□□ -1.91
COPA-204ENST00000481522 FRMPD3Q5JV73 1810 aa3.09□□□□□ -1.92
COPA-204ENST00000481522 ARID2Q68CP9 1835 aa3.09□□□□□ -1.92
COPA-204ENST00000481522 C17orf105B2RV13 164 aa3.08□□□□□ -1.92
COPA-204ENST00000481522 F8VVB4 439 aa3.08□□□□□ -1.92
COPA-204ENST00000481522 F8VWA3 439 aa3.08□□□□□ -1.92
COPA-204ENST00000481522 PGLSO95336 258 aa3.08□□□□□ -1.92
COPA-204ENST00000481522 HSPA4LO95757 839 aa3.08□□□□□ -1.92
COPA-204ENST00000481522 C9P02748 559 aa3.08□□□□□ -1.92
COPA-204ENST00000481522 GBAP04062 536 aa3.08□□□□□ -1.92
COPA-204ENST00000481522 CENPBP07199 599 aaPredicted RBP3.08□□□□□ -1.92
COPA-204ENST00000481522 VIMP08670 466 aaKnown RBP3.08□□□□□ -1.92
COPA-204ENST00000481522 F3P13726 295 aa3.08□□□□□ -1.92
COPA-204ENST00000481522 ADRA2CP18825 462 aa3.08□□□□□ -1.92
COPA-204ENST00000481522 ZNF10P21506 573 aaPredicted RBP3.08□□□□□ -1.92
COPA-204ENST00000481522 PRKACGP22612 351 aa3.08□□□□□ -1.92
COPA-204ENST00000481522 GP5P40197 560 aa3.08□□□□□ -1.92
COPA-204ENST00000481522 CRKLP46109 303 aaKnown RBP3.08□□□□□ -1.92
COPA-204ENST00000481522 GSCP56915 257 aaPredicted RBP3.08□□□□□ -1.92
COPA-204ENST00000481522 DCDC1P59894 354 aa3.08□□□□□ -1.92
COPA-204ENST00000481522 TNK1Q13470 666 aa3.08□□□□□ -1.92
COPA-204ENST00000481522 NECTIN1Q15223 517 aa3.08□□□□□ -1.92
COPA-204ENST00000481522 MTHFSDQ2M296 383 aaKnown RBP3.08□□□□□ -1.92
COPA-204ENST00000481522 FAM91A1Q658Y4 838 aa3.08□□□□□ -1.92
COPA-204ENST00000481522 FUT10Q6P4F1 479 aa3.08□□□□□ -1.92
COPA-204ENST00000481522 CYB5D1Q6P9G0 228 aa3.08□□□□□ -1.92
COPA-204ENST00000481522 TRAT1Q6PIZ9 186 aa3.08□□□□□ -1.92
COPA-204ENST00000481522 PET117Q6UWS5 81 aa3.08□□□□□ -1.92
COPA-204ENST00000481522 KIF6Q6ZMV9 814 aa3.08□□□□□ -1.92
COPA-204ENST00000481522 CHMP1BQ7LBR1 199 aa3.08□□□□□ -1.92
COPA-204ENST00000481522 PHLDB2Q86SQ0 1253 aa3.08□□□□□ -1.92
COPA-204ENST00000481522 GBP7Q8N8V2 638 aaPredicted RBP3.08□□□□□ -1.92
COPA-204ENST00000481522 HEXDCQ8WVB3 486 aa3.08□□□□□ -1.92
COPA-204ENST00000481522 AK8Q96MA6 479 aa3.08□□□□□ -1.92
COPA-204ENST00000481522 GDAP1L1Q96MZ0 367 aa3.08□□□□□ -1.92
COPA-204ENST00000481522 ZNF300Q96RE9 604 aaPredicted RBP3.08□□□□□ -1.92
COPA-204ENST00000481522 NDNQ99608 321 aa3.08□□□□□ -1.92
COPA-204ENST00000481522 PYGO2Q9BRQ0 406 aa3.08□□□□□ -1.92
COPA-204ENST00000481522 INPP5KQ9BT40 448 aa3.08□□□□□ -1.92
COPA-204ENST00000481522 HOXD1Q9GZZ0 328 aa3.08□□□□□ -1.92
COPA-204ENST00000481522 RAVER2Q9HCJ3 691 aaKnown RBP3.08□□□□□ -1.92
COPA-204ENST00000481522 PANK4Q9NVE7 773 aa3.08□□□□□ -1.92
COPA-204ENST00000481522 TBC1D13Q9NVG8 400 aa3.08□□□□□ -1.92
COPA-204ENST00000481522 CHCHD3Q9NX63 227 aaKnown RBP3.08□□□□□ -1.92
COPA-204ENST00000481522 TEX10Q9NXF1 929 aaPredicted RBP3.08□□□□□ -1.92
COPA-204ENST00000481522 ASIC3Q9UHC3 531 aa3.08□□□□□ -1.92
COPA-204ENST00000481522 SLC12A6Q9UHW9 1150 aa3.08□□□□□ -1.92
COPA-204ENST00000481522 AK9Q5TCS8 1911 aa3.08□□□□□ -1.92
COPA-204ENST00000481522 NPC1L1Q9UHC9 1359 aa3.08□□□□□ -1.92
COPA-204ENST00000481522 HERC1Q15751 4861 aa3.08□□□□□ -1.92
COPA-204ENST00000481522 LOC285556D6RIA3 1793 aa3.07□□□□□ -1.92
COPA-204ENST00000481522 ADAMTS9Q9P2N4 1935 aa3.07□□□□□ -1.92
COPA-204ENST00000481522 SLC1A7O00341 560 aa3.07□□□□□ -1.92
COPA-204ENST00000481522 WDR46O15213 610 aaKnown RBP3.07□□□□□ -1.92
COPA-204ENST00000481522 PPIP5K2O43314 1243 aa3.07□□□□□ -1.92
COPA-204ENST00000481522 PI15O43692 258 aa3.07□□□□□ -1.92
COPA-204ENST00000481522 PRAF2O60831 178 aa3.07□□□□□ -1.92
COPA-204ENST00000481522 RPN1P04843 607 aaKnown RBP3.07□□□□□ -1.92
COPA-204ENST00000481522 YES1P07947 543 aa3.07□□□□□ -1.92
COPA-204ENST00000481522 ZSCAN5DPP0CG00 497 aa3.07□□□□□ -1.92
COPA-204ENST00000481522 UGT1A4P22310 534 aa3.07□□□□□ -1.92
COPA-204ENST00000481522 AADACP22760 399 aa3.07□□□□□ -1.92
COPA-204ENST00000481522 HOXC13P31276 330 aa3.07□□□□□ -1.92
COPA-204ENST00000481522 SOX3P41225 446 aa3.07□□□□□ -1.92
COPA-204ENST00000481522 PRKCIP41743 596 aa3.07□□□□□ -1.92
COPA-204ENST00000481522 CDX1P47902 265 aaPredicted RBP3.07□□□□□ -1.92
COPA-204ENST00000481522 IL10RBQ08334 325 aa3.07□□□□□ -1.92
COPA-204ENST00000481522 SRSF9Q13242 221 aaKnown RBP eCLIP3.07□□□□□ -1.92
COPA-204ENST00000481522 FASTKD3Q14CZ7 662 aaKnown RBP3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms