RNA–Protein interactions for RNA: ENST00000481173.1

CCNL1-223, Transcript of cyclin L1, human

TSL 2

Gene CCNL1, Length 571 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-223	ENST00000481173	GJB2	P29033	226 aa		2.18	□□□□□ -2.06
CCNL1-223	ENST00000481173	PRKCI	P41743	596 aa		2.18	□□□□□ -2.06
CCNL1-223	ENST00000481173	NPY4R	P50391	375 aa		2.18	□□□□□ -2.06
CCNL1-223	ENST00000481173	NAGLU	P54802	743 aa		2.18	□□□□□ -2.06
CCNL1-223	ENST00000481173	RIPK4	P57078	832 aa		2.18	□□□□□ -2.06
CCNL1-223	ENST00000481173	FKBP1B	P68106	108 aa		2.18	□□□□□ -2.06
CCNL1-223	ENST00000481173	GSTO1	P78417	241 aa		2.18	□□□□□ -2.06
CCNL1-223	ENST00000481173	TOMM20	Q15388	145 aa		2.18	□□□□□ -2.06
CCNL1-223	ENST00000481173	CNPY1	Q3B7I2	92 aa		2.18	□□□□□ -2.06
CCNL1-223	ENST00000481173	SHE	Q5VZ18	495 aa		2.18	□□□□□ -2.06
CCNL1-223	ENST00000481173	WSCD1	Q658N2	575 aa		2.18	□□□□□ -2.06
CCNL1-223	ENST00000481173	ZNF776	Q68DI1	518 aa	Predicted RBP	2.18	□□□□□ -2.06
CCNL1-223	ENST00000481173	SLC30A6	Q6NXT4	461 aa		2.18	□□□□□ -2.06
CCNL1-223	ENST00000481173	PHLDB2	Q86SQ0	1253 aa		2.18	□□□□□ -2.06
CCNL1-223	ENST00000481173	ANKRD46	Q86W74	232 aa		2.18	□□□□□ -2.06
CCNL1-223	ENST00000481173	UBQLNL	Q8IYU4	475 aa		2.18	□□□□□ -2.06
CCNL1-223	ENST00000481173	TMEM99	Q8N816	258 aa		2.18	□□□□□ -2.06
CCNL1-223	ENST00000481173	ZNF671	Q8TAW3	534 aa		2.18	□□□□□ -2.06
CCNL1-223	ENST00000481173	SGF29	Q96ES7	293 aa		2.18	□□□□□ -2.06
CCNL1-223	ENST00000481173	CCM2	Q9BSQ5	444 aa		2.18	□□□□□ -2.06
CCNL1-223	ENST00000481173	TNMD	Q9H2S6	317 aa		2.18	□□□□□ -2.06
CCNL1-223	ENST00000481173	ZNF665	Q9H7R5	613 aa		2.18	□□□□□ -2.06
CCNL1-223	ENST00000481173	MINDY3	Q9H8M7	445 aa		2.18	□□□□□ -2.06
CCNL1-223	ENST00000481173	EXOC6B	Q9Y2D4	811 aa		2.18	□□□□□ -2.06
CCNL1-223	ENST00000481173	KIAA1217	Q5T5P2	1943 aa		2.18	□□□□□ -2.06
CCNL1-223	ENST00000481173	CFAP65	Q6ZU64	1925 aa	Known RBP	2.17	□□□□□ -2.06
CCNL1-223	ENST00000481173	MCF2L	O15068	1137 aa		2.17	□□□□□ -2.06
CCNL1-223	ENST00000481173	CS	O75390	466 aa	Known RBP	2.17	□□□□□ -2.06
CCNL1-223	ENST00000481173	GRAP2	O75791	330 aa		2.17	□□□□□ -2.06
CCNL1-223	ENST00000481173	OR6A2	O95222	327 aa		2.17	□□□□□ -2.06
CCNL1-223	ENST00000481173	LYPD3	O95274	346 aa		2.17	□□□□□ -2.06
CCNL1-223	ENST00000481173	RPN1	P04843	607 aa	Known RBP	2.17	□□□□□ -2.06
CCNL1-223	ENST00000481173	ADRA2C	P18825	462 aa		2.17	□□□□□ -2.06
CCNL1-223	ENST00000481173	KRT20	P35900	424 aa		2.17	□□□□□ -2.06
CCNL1-223	ENST00000481173	TNFRSF4	P43489	277 aa		2.17	□□□□□ -2.06
CCNL1-223	ENST00000481173	FNTA	P49354	379 aa		2.17	□□□□□ -2.06
CCNL1-223	ENST00000481173	FHIT	P49789	147 aa		2.17	□□□□□ -2.06
CCNL1-223	ENST00000481173	CXCL6	P80162	114 aa		2.17	□□□□□ -2.06
CCNL1-223	ENST00000481173	PAX2	Q02962	417 aa		2.17	□□□□□ -2.06
CCNL1-223	ENST00000481173	FOLH1	Q04609	750 aa		2.17	□□□□□ -2.06
CCNL1-223	ENST00000481173	SLC17A1	Q14916	467 aa		2.17	□□□□□ -2.06
CCNL1-223	ENST00000481173	C1orf141	Q5JVX7	400 aa		2.17	□□□□□ -2.06
CCNL1-223	ENST00000481173	SPOUT1	Q5T280	376 aa	Known RBP	2.17	□□□□□ -2.06
CCNL1-223	ENST00000481173	ZNF544	Q6NX49	715 aa		2.17	□□□□□ -2.06
CCNL1-223	ENST00000481173	ZNF530	Q6P9A1	599 aa	Predicted RBP	2.17	□□□□□ -2.06
CCNL1-223	ENST00000481173	IGFL2	Q6UWQ7	119 aa		2.17	□□□□□ -2.06
CCNL1-223	ENST00000481173	ABRAXAS1	Q6UWZ7	409 aa		2.17	□□□□□ -2.06
CCNL1-223	ENST00000481173	NHLRC1	Q6VVB1	395 aa		2.17	□□□□□ -2.06
CCNL1-223	ENST00000481173	CCDC186	Q7Z3E2	898 aa		2.17	□□□□□ -2.06
CCNL1-223	ENST00000481173	FBXO16	Q8IX29	292 aa	Predicted RBP	2.17	□□□□□ -2.06
CCNL1-223	ENST00000481173	RNF149	Q8NC42	400 aa		2.17	□□□□□ -2.06
CCNL1-223	ENST00000481173	BEST4	Q8NFU0	473 aa		2.17	□□□□□ -2.06
CCNL1-223	ENST00000481173	CCT8L2	Q96SF2	557 aa		2.17	□□□□□ -2.06
CCNL1-223	ENST00000481173	SDHC	Q99643	169 aa	Predicted RBP	2.17	□□□□□ -2.06
CCNL1-223	ENST00000481173	INPP5K	Q9BT40	448 aa		2.17	□□□□□ -2.06
CCNL1-223	ENST00000481173	PAXX	Q9BUH6	204 aa		2.17	□□□□□ -2.06
CCNL1-223	ENST00000481173	VIPAS39	Q9H9C1	493 aa		2.17	□□□□□ -2.06
CCNL1-223	ENST00000481173	ZNF319	Q9P2F9	582 aa		2.17	□□□□□ -2.06
CCNL1-223	ENST00000481173	ABCG2	Q9UNQ0	655 aa		2.17	□□□□□ -2.06
CCNL1-223	ENST00000481173	MOK	Q9UQ07	419 aa		2.17	□□□□□ -2.06
CCNL1-223	ENST00000481173	PLEKHA6	Q9Y2H5	1048 aa		2.17	□□□□□ -2.06
CCNL1-223	ENST00000481173	ETV7	Q9Y603	341 aa		2.17	□□□□□ -2.06
CCNL1-223	ENST00000481173		A0A087WV48	116 aa		2.16	□□□□□ -2.06
CCNL1-223	ENST00000481173	WI2-2373I1.2	A0A1W2PRP0	233 aa		2.16	□□□□□ -2.06
CCNL1-223	ENST00000481173	C5orf52	A6NGY3	159 aa		2.16	□□□□□ -2.06
CCNL1-223	ENST00000481173	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	2.16	□□□□□ -2.06
CCNL1-223	ENST00000481173	SELENOF	O60613	162 aa		2.16	□□□□□ -2.06
CCNL1-223	ENST00000481173	VIM	P08670	466 aa	Known RBP	2.16	□□□□□ -2.06
CCNL1-223	ENST00000481173	CCDC159	P0C7I6	412 aa		2.16	□□□□□ -2.06
CCNL1-223	ENST00000481173		P0C879	139 aa		2.16	□□□□□ -2.06
CCNL1-223	ENST00000481173	PGAM2	P15259	253 aa		2.16	□□□□□ -2.06
CCNL1-223	ENST00000481173	ZNF32	P17041	273 aa		2.16	□□□□□ -2.06
CCNL1-223	ENST00000481173	TIA1	P31483	386 aa	Known RBP eCLIP	2.16	□□□□□ -2.06
CCNL1-223	ENST00000481173	SLC25A1	P53007	311 aa		2.16	□□□□□ -2.06
CCNL1-223	ENST00000481173	RAD23A	P54725	363 aa		2.16	□□□□□ -2.06
CCNL1-223	ENST00000481173	LCP2	Q13094	533 aa		2.16	□□□□□ -2.06
CCNL1-223	ENST00000481173	ISX	Q2M1V0	245 aa		2.16	□□□□□ -2.06
CCNL1-223	ENST00000481173	C14orf28	Q4W4Y0	310 aa		2.16	□□□□□ -2.06
CCNL1-223	ENST00000481173	AGAP6	Q5VW22	663 aa		2.16	□□□□□ -2.06
CCNL1-223	ENST00000481173	PM20D1	Q6GTS8	502 aa		2.16	□□□□□ -2.06
CCNL1-223	ENST00000481173	ALKBH5	Q6P6C2	394 aa	Known RBP	2.16	□□□□□ -2.06
CCNL1-223	ENST00000481173	KRT74	Q7RTS7	529 aa		2.16	□□□□□ -2.06
CCNL1-223	ENST00000481173	ADGRD2	Q7Z7M1	963 aa		2.16	□□□□□ -2.06
CCNL1-223	ENST00000481173	DZIP1	Q86YF9	867 aa	Known RBP	2.16	□□□□□ -2.06
CCNL1-223	ENST00000481173	KIAA0895	Q8NCT3	520 aa		2.16	□□□□□ -2.06
CCNL1-223	ENST00000481173	CCDC191	Q8NCU4	936 aa		2.16	□□□□□ -2.06
CCNL1-223	ENST00000481173	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	2.16	□□□□□ -2.06
CCNL1-223	ENST00000481173	SIPA1	Q96FS4	1042 aa		2.16	□□□□□ -2.06
CCNL1-223	ENST00000481173	FERMT1	Q9BQL6	677 aa		2.16	□□□□□ -2.06
CCNL1-223	ENST00000481173	UBA5	Q9GZZ9	404 aa		2.16	□□□□□ -2.06
CCNL1-223	ENST00000481173	NKIRAS2	Q9NYR9	191 aa		2.16	□□□□□ -2.06
CCNL1-223	ENST00000481173	SPG21	Q9NZD8	308 aa		2.16	□□□□□ -2.06
CCNL1-223	ENST00000481173	PROS1	P07225	676 aa		2.15	□□□□□ -2.07
CCNL1-223	ENST00000481173	FCGR3A	P08637	254 aa		2.15	□□□□□ -2.07
CCNL1-223	ENST00000481173	HSD17B1	P14061	328 aa		2.15	□□□□□ -2.07
CCNL1-223	ENST00000481173	EZR	P15311	586 aa	Known RBP	2.15	□□□□□ -2.07
CCNL1-223	ENST00000481173	FOSL2	P15408	326 aa		2.15	□□□□□ -2.07
CCNL1-223	ENST00000481173	PPP2R1B	P30154	601 aa		2.15	□□□□□ -2.07
CCNL1-223	ENST00000481173	MAGEA9	P43362	315 aa		2.15	□□□□□ -2.07
CCNL1-223	ENST00000481173	NPBWR1	P48145	328 aa		2.15	□□□□□ -2.07

Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms