RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 CPN2P22792 545 aa14.15□□□□□ -0.14
LIMS3-203ENST00000480744 STX2P32856 288 aa14.15□□□□□ -0.14
LIMS3-203ENST00000480744 MAGEA4P43358 317 aa14.15□□□□□ -0.14
LIMS3-203ENST00000480744 KIR3DL1P43629 444 aa14.15□□□□□ -0.14
LIMS3-203ENST00000480744 HK2P52789 917 aa14.15□□□□□ -0.14
LIMS3-203ENST00000480744 PPIAP62937 165 aaKnown RBP14.15□□□□□ -0.14
LIMS3-203ENST00000480744 SERTAD2Q14140 314 aa14.15□□□□□ -0.14
LIMS3-203ENST00000480744 ZNF750Q32MQ0 723 aa14.15□□□□□ -0.14
LIMS3-203ENST00000480744 TMEM35AQ53FP2 167 aa14.15□□□□□ -0.14
LIMS3-203ENST00000480744 CEP128Q6ZU80 1094 aa14.15□□□□□ -0.14
LIMS3-203ENST00000480744 CHSY3Q70JA7 882 aa14.15□□□□□ -0.14
LIMS3-203ENST00000480744 CYS1Q717R9 158 aa14.15□□□□□ -0.14
LIMS3-203ENST00000480744 ZNF572Q7Z3I7 529 aaPredicted RBP14.15□□□□□ -0.14
LIMS3-203ENST00000480744 ISCA2Q86U28 154 aa14.15□□□□□ -0.14
LIMS3-203ENST00000480744 MYLK4Q86YV6 388 aaPredicted RBP14.15□□□□□ -0.14
LIMS3-203ENST00000480744 OR2M7Q8NG81 312 aa14.15□□□□□ -0.14
LIMS3-203ENST00000480744 FBXO25Q8TCJ0 367 aa14.15□□□□□ -0.14
LIMS3-203ENST00000480744 SLC2A12Q8TD20 617 aa14.15□□□□□ -0.14
LIMS3-203ENST00000480744 FBF1Q8TES7 1133 aa14.15□□□□□ -0.14
LIMS3-203ENST00000480744 TRIM44Q96DX7 344 aaPredicted RBP14.15□□□□□ -0.14
LIMS3-203ENST00000480744 MRRFQ96E11 262 aaKnown RBP14.15□□□□□ -0.14
LIMS3-203ENST00000480744 SORBS1Q9BX66 1292 aaKnown RBP14.15□□□□□ -0.14
LIMS3-203ENST00000480744 RAB17Q9H0T7 212 aa14.15□□□□□ -0.14
LIMS3-203ENST00000480744 ANGPTL3Q9Y5C1 460 aa14.15□□□□□ -0.14
LIMS3-203ENST00000480744 DCHS2Q6V1P9 2916 aa14.15□□□□□ -0.14
LIMS3-203ENST00000480744 HCFC1P51610 2035 aa14.15□□□□□ -0.14
LIMS3-203ENST00000480744 PDZD2O15018 2839 aa14.14□□□□□ -0.15
LIMS3-203ENST00000480744 K7EPI3 171 aa14.14□□□□□ -0.15
LIMS3-203ENST00000480744 KERAO60938 352 aa14.14□□□□□ -0.15
LIMS3-203ENST00000480744 LTA4HP09960 611 aaKnown RBP14.14□□□□□ -0.15
LIMS3-203ENST00000480744 COX7A2P14406 83 aa14.14□□□□□ -0.15
LIMS3-203ENST00000480744 HIST1H1TP22492 207 aaPredicted RBP14.14□□□□□ -0.15
LIMS3-203ENST00000480744 CRABP2P29373 138 aa14.14□□□□□ -0.15
LIMS3-203ENST00000480744 CASP2P42575 452 aa14.14□□□□□ -0.15
LIMS3-203ENST00000480744 NR0B1P51843 470 aaKnown RBP14.14□□□□□ -0.15
LIMS3-203ENST00000480744 RAP1GDS1P52306 607 aa14.14□□□□□ -0.15
LIMS3-203ENST00000480744 RNF4P78317 190 aa14.14□□□□□ -0.15
LIMS3-203ENST00000480744 CAV1Q03135 178 aa14.14□□□□□ -0.15
LIMS3-203ENST00000480744 TRADDQ15628 312 aa14.14□□□□□ -0.15
LIMS3-203ENST00000480744 ARHGAP11AQ6P4F7 1023 aa14.14□□□□□ -0.15
LIMS3-203ENST00000480744 PAOXQ6QHF9 649 aa14.14□□□□□ -0.15
LIMS3-203ENST00000480744 RTL4Q6ZR62 310 aa14.14□□□□□ -0.15
LIMS3-203ENST00000480744 OR4N5Q8IXE1 308 aa14.14□□□□□ -0.15
LIMS3-203ENST00000480744 LAS2Q8IYD9 372 aa14.14□□□□□ -0.15
LIMS3-203ENST00000480744 ZNF295-AS1Q8N0V1 137 aa14.14□□□□□ -0.15
LIMS3-203ENST00000480744 RNF175Q8N4F7 328 aa14.14□□□□□ -0.15
LIMS3-203ENST00000480744 OR7G3Q8NG95 312 aa14.14□□□□□ -0.15
LIMS3-203ENST00000480744 CMTM7Q96FZ5 175 aa14.14□□□□□ -0.15
LIMS3-203ENST00000480744 ATOH8Q96SQ7 321 aa14.14□□□□□ -0.15
LIMS3-203ENST00000480744 OR51B5Q9H339 312 aa14.14□□□□□ -0.15
LIMS3-203ENST00000480744 TP63Q9H3D4 680 aaPredicted RBP14.14□□□□□ -0.15
LIMS3-203ENST00000480744 IGSF5Q9NSI5 407 aa14.14□□□□□ -0.15
LIMS3-203ENST00000480744 COPS7AQ9UBW8 275 aa14.14□□□□□ -0.15
LIMS3-203ENST00000480744 INTS1Q8N201 2190 aaKnown RBP14.13□□□□□ -0.15
LIMS3-203ENST00000480744 FGF17O60258 216 aa14.13□□□□□ -0.15
LIMS3-203ENST00000480744 URI1O94763 535 aaPredicted RBP14.13□□□□□ -0.15
LIMS3-203ENST00000480744 EPB42P16452 691 aa14.13□□□□□ -0.15
LIMS3-203ENST00000480744 SERPINB1P30740 379 aa14.13□□□□□ -0.15
LIMS3-203ENST00000480744 SSTR2P30874 369 aa14.13□□□□□ -0.15
LIMS3-203ENST00000480744 IRF9Q00978 393 aa14.13□□□□□ -0.15
LIMS3-203ENST00000480744 SLAMF1Q13291 335 aa14.13□□□□□ -0.15
LIMS3-203ENST00000480744 KHDRBS2Q5VWX1 349 aaKnown RBP14.13□□□□□ -0.15
LIMS3-203ENST00000480744 TMEM211Q6ICI0 200 aa14.13□□□□□ -0.15
LIMS3-203ENST00000480744 GRHL2Q6ISB3 625 aa14.13□□□□□ -0.15
LIMS3-203ENST00000480744 ZDHHC24Q6UX98 284 aa14.13□□□□□ -0.15
LIMS3-203ENST00000480744 MEX3BQ6ZN04 569 aaKnown RBP14.13□□□□□ -0.15
LIMS3-203ENST00000480744 GK5Q6ZS86 529 aa14.13□□□□□ -0.15
LIMS3-203ENST00000480744 MARVELD2Q8N4S9 558 aa14.13□□□□□ -0.15
LIMS3-203ENST00000480744 TEX9Q8N6V9 391 aa14.13□□□□□ -0.15
LIMS3-203ENST00000480744 OR5L2Q8NGL0 311 aa14.13□□□□□ -0.15
LIMS3-203ENST00000480744 UBTD2Q8WUN7 234 aa14.13□□□□□ -0.15
LIMS3-203ENST00000480744 CHTF18Q8WVB6 975 aa14.13□□□□□ -0.15
LIMS3-203ENST00000480744 KCTD4Q8WVF5 259 aa14.13□□□□□ -0.15
LIMS3-203ENST00000480744 ZNF592Q92610 1267 aa14.13□□□□□ -0.15
LIMS3-203ENST00000480744 ANKRD9Q96BM1 317 aaPredicted RBP14.13□□□□□ -0.15
LIMS3-203ENST00000480744 NXNL1Q96CM4 212 aa14.13□□□□□ -0.15
LIMS3-203ENST00000480744 SCYL1Q96KG9 808 aa14.13□□□□□ -0.15
LIMS3-203ENST00000480744 DGAT2Q96PD7 388 aa14.13□□□□□ -0.15
LIMS3-203ENST00000480744 TTTY12Q9BZ98 90 aa14.13□□□□□ -0.15
LIMS3-203ENST00000480744 ITGB1BP2Q9UKP3 347 aa14.13□□□□□ -0.15
LIMS3-203ENST00000480744 ACOT9Q9Y305 439 aa14.13□□□□□ -0.15
LIMS3-203ENST00000480744 HRH3Q9Y5N1 445 aa14.13□□□□□ -0.15
LIMS3-203ENST00000480744 NCKAP5O14513 1909 aa14.12□□□□□ -0.15
LIMS3-203ENST00000480744 FAM90A27PA6NNH2 459 aa14.12□□□□□ -0.15
LIMS3-203ENST00000480744 NPIPA2E9PIF3 369 aa14.12□□□□□ -0.15
LIMS3-203ENST00000480744 NPIPA3F8WFD2 350 aa14.12□□□□□ -0.15
LIMS3-203ENST00000480744 ETHE1O95571 254 aa14.12□□□□□ -0.15
LIMS3-203ENST00000480744 GFAPP14136 432 aa14.12□□□□□ -0.15
LIMS3-203ENST00000480744 NAB1Q13506 487 aa14.12□□□□□ -0.15
LIMS3-203ENST00000480744 E2F2Q14209 437 aa14.12□□□□□ -0.15
LIMS3-203ENST00000480744 UAP1Q16222 522 aaPredicted RBP14.12□□□□□ -0.15
LIMS3-203ENST00000480744 DEPDC1Q5TB30 811 aa14.12□□□□□ -0.15
LIMS3-203ENST00000480744 OR4C11Q6IEV9 310 aa14.12□□□□□ -0.15
LIMS3-203ENST00000480744 OPN5Q6U736 354 aa14.12□□□□□ -0.15
LIMS3-203ENST00000480744 FAM47EQ6ZV65 393 aa14.12□□□□□ -0.15
LIMS3-203ENST00000480744 SLC22A16Q86VW1 577 aa14.12□□□□□ -0.15
LIMS3-203ENST00000480744 OR8K3Q8NH51 312 aa14.12□□□□□ -0.15
LIMS3-203ENST00000480744 HUS1BQ8NHY5 278 aa14.12□□□□□ -0.15
LIMS3-203ENST00000480744 DOK4Q8TEW6 326 aa14.12□□□□□ -0.15
LIMS3-203ENST00000480744 RGMAQ96B86 450 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms