RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 VNN3Q9NY84 501 aa9.2□□□□□ -0.94
VEGFA-212ENST00000480614 GPRC5BQ9NZH0 403 aa9.2□□□□□ -0.94
VEGFA-212ENST00000480614 RIPK3Q9Y572 518 aa9.2□□□□□ -0.94
VEGFA-212ENST00000480614 RIF1Q5UIP0 2472 aaKnown RBP9.2□□□□□ -0.94
VEGFA-212ENST00000480614 BLOC1S5-TXNDC5H3BN57 136 aa9.19□□□□□ -0.94
VEGFA-212ENST00000480614 BCHEP06276 602 aa9.19□□□□□ -0.94
VEGFA-212ENST00000480614 AMY2BP19961 511 aa9.19□□□□□ -0.94
VEGFA-212ENST00000480614 IRF9Q00978 393 aa9.19□□□□□ -0.94
VEGFA-212ENST00000480614 PIGGQ5H8A4 983 aa9.19□□□□□ -0.94
VEGFA-212ENST00000480614 TOR1AIP2Q8NFQ8 470 aa9.19□□□□□ -0.94
VEGFA-212ENST00000480614 TOR3AQ9H497 397 aa9.19□□□□□ -0.94
VEGFA-212ENST00000480614 HSPB11Q9Y547 144 aa9.19□□□□□ -0.94
VEGFA-212ENST00000480614 ZNFX1Q9P2E3 1918 aaKnown RBP9.19□□□□□ -0.94
VEGFA-212ENST00000480614 TOR1BO14657 336 aa9.19□□□□□ -0.94
VEGFA-212ENST00000480614 RGS9O75916 674 aaPredicted RBP9.19□□□□□ -0.94
VEGFA-212ENST00000480614 MT-CO2P00403 227 aa9.19□□□□□ -0.94
VEGFA-212ENST00000480614 FOXN2P32314 431 aa9.19□□□□□ -0.94
VEGFA-212ENST00000480614 ACSBG2Q5FVE4 666 aa9.19□□□□□ -0.94
VEGFA-212ENST00000480614 CNKSR3Q6P9H4 555 aa9.19□□□□□ -0.94
VEGFA-212ENST00000480614 SLC16A9Q7RTY1 509 aa9.19□□□□□ -0.94
VEGFA-212ENST00000480614 KLK6Q92876 244 aa9.19□□□□□ -0.94
VEGFA-212ENST00000480614 SLC6A16Q9GZN6 736 aa9.19□□□□□ -0.94
VEGFA-212ENST00000480614 RXFP3Q9NSD7 469 aa9.19□□□□□ -0.94
VEGFA-212ENST00000480614 COL6A6A6NMZ7 2263 aa9.19□□□□□ -0.94
VEGFA-212ENST00000480614 ZNF142P52746 1687 aaPredicted RBP9.19□□□□□ -0.94
VEGFA-212ENST00000480614 GSRP00390 522 aa9.19□□□□□ -0.94
VEGFA-212ENST00000480614 INHAP05111 366 aa9.19□□□□□ -0.94
VEGFA-212ENST00000480614 CARTPTQ16568 116 aa9.19□□□□□ -0.94
VEGFA-212ENST00000480614 SLC22A16Q86VW1 577 aa9.19□□□□□ -0.94
VEGFA-212ENST00000480614 KCNJ9Q92806 393 aa9.19□□□□□ -0.94
VEGFA-212ENST00000480614 DAZLQ92904 295 aaKnown RBP9.19□□□□□ -0.94
VEGFA-212ENST00000480614 DPEP3Q9H4B8 488 aa9.19□□□□□ -0.94
VEGFA-212ENST00000480614 UBQLN2Q9UHD9 624 aa9.19□□□□□ -0.94
VEGFA-212ENST00000480614 YIPF1Q9Y548 306 aa9.19□□□□□ -0.94
VEGFA-212ENST00000480614 C2orf92A0A1B0GVN3 265 aa9.19□□□□□ -0.94
VEGFA-212ENST00000480614 KLRG2A4D1S0 409 aaPredicted RBP9.19□□□□□ -0.94
VEGFA-212ENST00000480614 PROZP22891 400 aa9.19□□□□□ -0.94
VEGFA-212ENST00000480614 GDI1P31150 447 aa9.19□□□□□ -0.94
VEGFA-212ENST00000480614 RAB41Q5JT25 222 aa9.19□□□□□ -0.94
VEGFA-212ENST00000480614 TRMT10BQ6PF06 316 aaKnown RBP9.19□□□□□ -0.94
VEGFA-212ENST00000480614 PPP4R1LQ9P1A2 415 aa9.19□□□□□ -0.94
VEGFA-212ENST00000480614 A0A1W2PPL8 197 aa9.19□□□□□ -0.94
VEGFA-212ENST00000480614 ACOT7O00154 380 aa9.19□□□□□ -0.94
VEGFA-212ENST00000480614 PRKYO43930 277 aa9.19□□□□□ -0.94
VEGFA-212ENST00000480614 OAZ2O95190 189 aa9.19□□□□□ -0.94
VEGFA-212ENST00000480614 C6orf47O95873 294 aa9.19□□□□□ -0.94
VEGFA-212ENST00000480614 SPARCP09486 303 aa9.19□□□□□ -0.94
VEGFA-212ENST00000480614 GK3PQ14409 553 aa9.19□□□□□ -0.94
VEGFA-212ENST00000480614 ATP6AP1Q15904 470 aa9.19□□□□□ -0.94
VEGFA-212ENST00000480614 FBXL22Q6P050 247 aa9.19□□□□□ -0.94
VEGFA-212ENST00000480614 SAMD12Q8N8I0 201 aa9.19□□□□□ -0.94
VEGFA-212ENST00000480614 PYCR2Q96C36 320 aa9.19□□□□□ -0.94
VEGFA-212ENST00000480614 HDHD5Q9BXW7 423 aa9.19□□□□□ -0.94
VEGFA-212ENST00000480614 ZNF226Q9NYT6 803 aa9.19□□□□□ -0.94
VEGFA-212ENST00000480614 EPHA6Q9UF33 1036 aa9.19□□□□□ -0.94
VEGFA-212ENST00000480614 DDX60Q8IY21 1712 aaKnown RBP9.19□□□□□ -0.94
VEGFA-212ENST00000480614 SOX1O00570 391 aaPredicted RBP9.19□□□□□ -0.94
VEGFA-212ENST00000480614 TGFB1P01137 390 aa9.19□□□□□ -0.94
VEGFA-212ENST00000480614 ZNF423Q2M1K9 1284 aa9.19□□□□□ -0.94
VEGFA-212ENST00000480614 C2CD4AQ8NCU7 369 aaPredicted RBP9.19□□□□□ -0.94
VEGFA-212ENST00000480614 COQ8AQ8NI60 647 aa9.19□□□□□ -0.94
VEGFA-212ENST00000480614 REEP4Q9H6H4 257 aa9.19□□□□□ -0.94
VEGFA-212ENST00000480614 RPF2Q9H7B2 306 aaKnown RBP9.19□□□□□ -0.94
VEGFA-212ENST00000480614 DLGAP4Q9Y2H0 992 aa9.19□□□□□ -0.94
VEGFA-212ENST00000480614 A8MT66 165 aa9.19□□□□□ -0.94
VEGFA-212ENST00000480614 B4GALT2O60909 372 aa9.19□□□□□ -0.94
VEGFA-212ENST00000480614 PEX14O75381 377 aa9.19□□□□□ -0.94
VEGFA-212ENST00000480614 LPLP06858 475 aa9.19□□□□□ -0.94
VEGFA-212ENST00000480614 PABPC4LP0CB38 370 aaKnown RBP9.19□□□□□ -0.94
VEGFA-212ENST00000480614 RPP30P78346 268 aaKnown RBP9.19□□□□□ -0.94
VEGFA-212ENST00000480614 GALK2Q01415 458 aa9.19□□□□□ -0.94
VEGFA-212ENST00000480614 AGTRAPQ6RW13 159 aa9.19□□□□□ -0.94
VEGFA-212ENST00000480614 KCTD9Q7L273 389 aa9.19□□□□□ -0.94
VEGFA-212ENST00000480614 ZNF283Q8N7M2 679 aa9.19□□□□□ -0.94
VEGFA-212ENST00000480614 BIRC8Q96P09 236 aa9.19□□□□□ -0.94
VEGFA-212ENST00000480614 ATRNL1Q5VV63 1379 aa9.19□□□□□ -0.94
VEGFA-212ENST00000480614 ZNF487B1APH4 448 aa9.19□□□□□ -0.94
VEGFA-212ENST00000480614 FRKP42685 505 aaPredicted RBP9.19□□□□□ -0.94
VEGFA-212ENST00000480614 RPS15AP62244 130 aaKnown RBP9.19□□□□□ -0.94
VEGFA-212ENST00000480614 HMGCS1Q01581 520 aa9.19□□□□□ -0.94
VEGFA-212ENST00000480614 PAFAH1B3Q15102 231 aaKnown RBP9.19□□□□□ -0.94
VEGFA-212ENST00000480614 SHQ1Q6PI26 577 aaKnown RBP9.19□□□□□ -0.94
VEGFA-212ENST00000480614 CARM1Q86X55 608 aa9.19□□□□□ -0.94
VEGFA-212ENST00000480614 PLEKHO2Q8TD55 490 aa9.19□□□□□ -0.94
VEGFA-212ENST00000480614 HS6ST2Q96MM7 605 aa9.19□□□□□ -0.94
VEGFA-212ENST00000480614 PIP5K1AQ99755 562 aa9.19□□□□□ -0.94
VEGFA-212ENST00000480614 HOXD1Q9GZZ0 328 aa9.19□□□□□ -0.94
VEGFA-212ENST00000480614 RHCEP18577 417 aa9.19□□□□□ -0.94
VEGFA-212ENST00000480614 BDKRB1P46663 353 aa9.19□□□□□ -0.94
VEGFA-212ENST00000480614 ENTPD1P49961 510 aa9.19□□□□□ -0.94
VEGFA-212ENST00000480614 BCL2L15Q5TBC7 163 aa9.19□□□□□ -0.94
VEGFA-212ENST00000480614 SLC22A8Q8TCC7 542 aa9.19□□□□□ -0.94
VEGFA-212ENST00000480614 KLHDC7BQ96G42 594 aa9.19□□□□□ -0.94
VEGFA-212ENST00000480614 C7orf50Q9BRJ6 194 aaKnown RBP9.19□□□□□ -0.94
VEGFA-212ENST00000480614 YIPF4Q9BSR8 244 aa9.19□□□□□ -0.94
VEGFA-212ENST00000480614 PDE7BQ9NP56 450 aa9.19□□□□□ -0.94
VEGFA-212ENST00000480614 TMEM248Q9NWD8 314 aa9.19□□□□□ -0.94
VEGFA-212ENST00000480614 HS3ST4Q9Y661 456 aa9.19□□□□□ -0.94
VEGFA-212ENST00000480614 TSPAN6O43657 245 aa9.19□□□□□ -0.94
VEGFA-212ENST00000480614 HOXB2P14652 356 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms