RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 RNH1P13489 461 aaKnown RBP11.5□□□□□ -0.57
TRA2B-212ENST00000480461 MDH1P40925 334 aaKnown RBP11.5□□□□□ -0.57
TRA2B-212ENST00000480461 HK2P52789 917 aa11.5□□□□□ -0.57
TRA2B-212ENST00000480461 RAB38P57729 211 aa11.5□□□□□ -0.57
TRA2B-212ENST00000480461 OCA2Q04671 838 aa11.5□□□□□ -0.57
TRA2B-212ENST00000480461 TBR1Q16650 682 aa11.5□□□□□ -0.57
TRA2B-212ENST00000480461 C6orf136Q5SQH8 315 aa11.5□□□□□ -0.57
TRA2B-212ENST00000480461 CCNYL2Q5T2Q4 361 aa11.5□□□□□ -0.57
TRA2B-212ENST00000480461 NIPAL1Q6NVV3 410 aa11.5□□□□□ -0.57
TRA2B-212ENST00000480461 NOXRED1Q6NXP6 359 aa11.5□□□□□ -0.57
TRA2B-212ENST00000480461 FAM47EQ6ZV65 393 aa11.5□□□□□ -0.57
TRA2B-212ENST00000480461 PPP1R32Q7Z5V6 425 aa11.5□□□□□ -0.57
TRA2B-212ENST00000480461 GPR180Q86V85 440 aa11.5□□□□□ -0.57
TRA2B-212ENST00000480461 FAM47BQ8NA70 645 aa11.5□□□□□ -0.57
TRA2B-212ENST00000480461 NUDT8Q8WV74 236 aa11.5□□□□□ -0.57
TRA2B-212ENST00000480461 STARD8Q92502 1023 aa11.5□□□□□ -0.57
TRA2B-212ENST00000480461 ANKRD9Q96BM1 317 aaPredicted RBP11.5□□□□□ -0.57
TRA2B-212ENST00000480461 C19orf60Q96EN9 201 aa11.5□□□□□ -0.57
TRA2B-212ENST00000480461 EGLN2Q96KS0 407 aa11.5□□□□□ -0.57
TRA2B-212ENST00000480461 FCRL1Q96LA6 429 aa11.5□□□□□ -0.57
TRA2B-212ENST00000480461 PSMG3-AS1Q96PY0 264 aa11.5□□□□□ -0.57
TRA2B-212ENST00000480461 ROGDIQ9GZN7 287 aa11.5□□□□□ -0.57
TRA2B-212ENST00000480461 WDR55Q9H6Y2 383 aaPredicted RBP11.5□□□□□ -0.57
TRA2B-212ENST00000480461 AKTIPQ9H8T0 292 aa11.5□□□□□ -0.57
TRA2B-212ENST00000480461 LRTM1Q9HBL6 345 aa11.5□□□□□ -0.57
TRA2B-212ENST00000480461 NECTIN3Q9NQS3 549 aa11.5□□□□□ -0.57
TRA2B-212ENST00000480461 NMRK1Q9NWW6 199 aa11.5□□□□□ -0.57
TRA2B-212ENST00000480461 C1orf109Q9NX04 203 aa11.5□□□□□ -0.57
TRA2B-212ENST00000480461 AHSPQ9NZD4 102 aa11.5□□□□□ -0.57
TRA2B-212ENST00000480461 C3orf18Q9UK00 162 aa11.5□□□□□ -0.57
TRA2B-212ENST00000480461 KCND3Q9UK17 655 aa11.5□□□□□ -0.57
TRA2B-212ENST00000480461 MKL2Q9ULH7 1088 aa11.5□□□□□ -0.57
TRA2B-212ENST00000480461 A0A1W2PS29 197 aa11.49□□□□□ -0.57
TRA2B-212ENST00000480461 GLOD5A6NK44 160 aa11.49□□□□□ -0.57
TRA2B-212ENST00000480461 SDHDO14521 159 aa11.49□□□□□ -0.57
TRA2B-212ENST00000480461 SOCS6O14544 535 aa11.49□□□□□ -0.57
TRA2B-212ENST00000480461 HDAC3O15379 428 aa11.49□□□□□ -0.57
TRA2B-212ENST00000480461 RGS14O43566 566 aa11.49□□□□□ -0.57
TRA2B-212ENST00000480461 CHEK2O96017 543 aa11.49□□□□□ -0.57
TRA2B-212ENST00000480461 PRR35P0CG20 571 aa11.49□□□□□ -0.57
TRA2B-212ENST00000480461 MAOAP21397 527 aa11.49□□□□□ -0.57
TRA2B-212ENST00000480461 EMP2P54851 167 aa11.49□□□□□ -0.57
TRA2B-212ENST00000480461 FOXK1P85037 733 aa11.49□□□□□ -0.57
TRA2B-212ENST00000480461 MC1RQ01726 317 aa11.49□□□□□ -0.57
TRA2B-212ENST00000480461 ACSM2AQ08AH3 577 aa11.49□□□□□ -0.57
TRA2B-212ENST00000480461 SSPNQ14714 243 aa11.49□□□□□ -0.57
TRA2B-212ENST00000480461 NR6A1Q15406 480 aa11.49□□□□□ -0.57
TRA2B-212ENST00000480461 IMPG1Q17R60 797 aa11.49□□□□□ -0.57
TRA2B-212ENST00000480461 GALNTL6Q49A17 601 aa11.49□□□□□ -0.57
TRA2B-212ENST00000480461 SLC9B1Q4ZJI4 515 aa11.49□□□□□ -0.57
TRA2B-212ENST00000480461 ACSM2BQ68CK6 577 aa11.49□□□□□ -0.57
TRA2B-212ENST00000480461 FAAH2Q6GMR7 532 aa11.49□□□□□ -0.57
TRA2B-212ENST00000480461 KIRREL2Q6UWL6 708 aa11.49□□□□□ -0.57
TRA2B-212ENST00000480461 LANCL3Q6ZV70 420 aa11.49□□□□□ -0.57
TRA2B-212ENST00000480461 LARP4Q71RC2 724 aaKnown RBP eCLIP11.49□□□□□ -0.57
TRA2B-212ENST00000480461 NUDT13Q86X67 352 aa11.49□□□□□ -0.57
TRA2B-212ENST00000480461 OR4N5Q8IXE1 308 aa11.49□□□□□ -0.57
TRA2B-212ENST00000480461 ARFGAP2Q8N6H7 521 aa11.49□□□□□ -0.57
TRA2B-212ENST00000480461 PLPP5Q8NEB5 264 aa11.49□□□□□ -0.57
TRA2B-212ENST00000480461 FAM76AQ8TAV0 307 aa11.49□□□□□ -0.57
TRA2B-212ENST00000480461 PIWIL2Q8TC59 973 aaKnown RBP11.49□□□□□ -0.57
TRA2B-212ENST00000480461 C16orf78Q8WTQ4 265 aa11.49□□□□□ -0.57
TRA2B-212ENST00000480461 TSLPQ969D9 159 aa11.49□□□□□ -0.57
TRA2B-212ENST00000480461 KIAA1143Q96AT1 154 aaPredicted RBP11.49□□□□□ -0.57
TRA2B-212ENST00000480461 C8orf44Q96CB5 159 aa11.49□□□□□ -0.57
TRA2B-212ENST00000480461 OR1F2PQ96R84 312 aa11.49□□□□□ -0.57
TRA2B-212ENST00000480461 CENPKQ9BS16 269 aa11.49□□□□□ -0.57
TRA2B-212ENST00000480461 EBPLQ9BY08 206 aa11.49□□□□□ -0.57
TRA2B-212ENST00000480461 COPS7BQ9H9Q2 264 aaPredicted RBP11.49□□□□□ -0.57
TRA2B-212ENST00000480461 MEAF6Q9HAF1 191 aa11.49□□□□□ -0.57
TRA2B-212ENST00000480461 HEY2Q9UBP5 337 aa11.49□□□□□ -0.57
TRA2B-212ENST00000480461 BAIAP2L1Q9UHR4 511 aa11.49□□□□□ -0.57
TRA2B-212ENST00000480461 MCM8Q9UJA3 840 aa11.49□□□□□ -0.57
TRA2B-212ENST00000480461 CES1P1Q9UKY3 287 aa11.49□□□□□ -0.57
TRA2B-212ENST00000480461 POLR3HQ9Y535 204 aaPredicted RBP11.49□□□□□ -0.57
TRA2B-212ENST00000480461 HS3ST3B1Q9Y662 390 aa11.49□□□□□ -0.57
TRA2B-212ENST00000480461 NBASA2RRP1 2371 aa11.48□□□□□ -0.57
TRA2B-212ENST00000480461 A0A088AWK7 358 aa11.48□□□□□ -0.57
TRA2B-212ENST00000480461 IGKV3D-11A0A0A0MRZ8 115 aa11.48□□□□□ -0.57
TRA2B-212ENST00000480461 IGHV3-20A0A0C4DH32 117 aa11.48□□□□□ -0.57
TRA2B-212ENST00000480461 PCDH7O60245 1069 aa11.48□□□□□ -0.57
TRA2B-212ENST00000480461 EDF1O60869 148 aaKnown RBP11.48□□□□□ -0.57
TRA2B-212ENST00000480461 LDB3O75112 727 aa11.48□□□□□ -0.57
TRA2B-212ENST00000480461 AIFM1O95831 613 aa11.48□□□□□ -0.57
TRA2B-212ENST00000480461 ANXA4P09525 319 aaPredicted RBP11.48□□□□□ -0.57
TRA2B-212ENST00000480461 PRKAR1AP10644 381 aa11.48□□□□□ -0.57
TRA2B-212ENST00000480461 ZNF10P21506 573 aaPredicted RBP11.48□□□□□ -0.57
TRA2B-212ENST00000480461 IL10P22301 178 aa11.48□□□□□ -0.57
TRA2B-212ENST00000480461 CPN2P22792 545 aa11.48□□□□□ -0.57
TRA2B-212ENST00000480461 MMP11P24347 488 aa11.48□□□□□ -0.57
TRA2B-212ENST00000480461 PPP2R1BP30154 601 aa11.48□□□□□ -0.57
TRA2B-212ENST00000480461 TIA1P31483 386 aaKnown RBP eCLIP11.48□□□□□ -0.572e-9■■■■■ 33.1
TRA2B-212ENST00000480461 FOLR3P41439 243 aa11.48□□□□□ -0.57
TRA2B-212ENST00000480461 MAPK12P53778 367 aa11.48□□□□□ -0.57
TRA2B-212ENST00000480461 TAS2R50P59544 299 aa11.48□□□□□ -0.57
TRA2B-212ENST00000480461 ID2Q02363 134 aa11.48□□□□□ -0.57
TRA2B-212ENST00000480461 UGT8Q16880 541 aa11.48□□□□□ -0.57
TRA2B-212ENST00000480461 ZNF750Q32MQ0 723 aa11.48□□□□□ -0.57
TRA2B-212ENST00000480461 TUBB8Q3ZCM7 444 aa11.48□□□□□ -0.57
TRA2B-212ENST00000480461 MINDY4Q4G0A6 757 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms