RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 E2F2Q14209 437 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 C16orf72Q14CZ0 275 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 MEP1AQ16819 746 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 CTU2Q2VPK5 515 aaKnown RBP4.73□□□□□ -1.65
SF3B6-202ENST00000478050 FNDC3BQ53EP0 1204 aaKnown RBP4.73□□□□□ -1.65
SF3B6-202ENST00000478050 ZNF805Q5CZA5 627 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.73□□□□□ -1.65
SF3B6-202ENST00000478050 FGD3Q5JSP0 725 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 CPTPQ5TA50 214 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 PRAMEF9Q5VWM5 478 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 KDM4DQ6B0I6 523 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 GTF2IRD2BQ6EKJ0 949 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 CAPN13Q6MZZ7 669 aaPredicted RBP4.73□□□□□ -1.65
SF3B6-202ENST00000478050 ANKRD26P1Q6NSI1 321 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 ERAP2Q6P179 960 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 AGTRAPQ6RW13 159 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 Q6ZNX1 250 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 LINC00299Q6ZSB3 139 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 ZNF621Q6ZSS3 439 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 Q6ZVL8 140 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 CHST15Q7LFX5 561 aaPredicted RBP4.73□□□□□ -1.65
SF3B6-202ENST00000478050 HSD11B1LQ7Z5J1 315 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 TECPR1Q7Z6L1 1165 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 RBM23Q86U06 439 aaKnown RBP4.73□□□□□ -1.65
SF3B6-202ENST00000478050 GTF2IRD2Q86UP8 949 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 ADIPOR2Q86V24 386 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 PTOV1Q86YD1 416 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 TMEM25Q86YD3 366 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 ANKRD13BQ86YJ7 626 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 CHPFQ8IZ52 775 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 SLC22A15Q8IZD6 547 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 HS3ST5Q8IZT8 346 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 C10orf111Q8N326 155 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 OR56A3Q8NH54 315 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 WFIKKN2Q8TEU8 576 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 CYB5D2Q8WUJ1 264 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 TRUB1Q8WWH5 349 aaKnown RBP4.73□□□□□ -1.65
SF3B6-202ENST00000478050 GLYATL1Q969I3 302 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 PYCR2Q96C36 320 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 VWCEQ96DN2 955 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 NODALQ96S42 347 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 YME1L1Q96TA2 773 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 EPYCQ99645 322 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 CCM2Q9BSQ5 444 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 DUSP26Q9BV47 211 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 RIOK2Q9BVS4 552 aaKnown RBP4.73□□□□□ -1.65
SF3B6-202ENST00000478050 EBPLQ9BY08 206 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 NAA50Q9GZZ1 169 aaKnown RBP4.73□□□□□ -1.65
SF3B6-202ENST00000478050 LHPPQ9H008 270 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 KLHL25Q9H0H3 589 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.73□□□□□ -1.65
SF3B6-202ENST00000478050 ATG10Q9H0Y0 220 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 ABCG8Q9H221 673 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 RAD21L1Q9H4I0 556 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 REEP1Q9H902 201 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 SGK2Q9HBY8 427 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 PREBQ9HCU5 417 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 CCNB1IP1Q9NPC3 277 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 SPHK2Q9NRA0 654 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 GALNT8Q9NY28 637 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 KIF17Q9P2E2 1029 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 STOX2Q9P2F5 926 aaPredicted RBP4.73□□□□□ -1.65
SF3B6-202ENST00000478050 ZNF282Q9UDV7 671 aaPredicted RBP4.73□□□□□ -1.65
SF3B6-202ENST00000478050 IL36AQ9UHA7 158 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 CD84Q9UIB8 345 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 SLCO3A1Q9UIG8 710 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 ENPP5Q9UJA9 477 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 VPS4AQ9UN37 437 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 B3GNT3Q9Y2A9 372 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 GMPPBQ9Y5P6 360 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 MYO10Q9HD67 2058 aa4.73□□□□□ -1.65
SF3B6-202ENST00000478050 MGAT4DA6NG13 374 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 OR2AG2A6NM03 316 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 FADS2P1A8MWK0 482 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 MYO1GB0I1T2 1018 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 E7EQ34 232 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 H3BQ06 376 aaPredicted RBP4.72□□□□□ -1.65
SF3B6-202ENST00000478050 HRKO00198 91 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 FOXE1O00358 373 aaPredicted RBP4.72□□□□□ -1.65
SF3B6-202ENST00000478050 RNASET2O00584 256 aaKnown RBP4.72□□□□□ -1.65
SF3B6-202ENST00000478050 ZNF197O14709 1029 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 B4GAT1O43505 415 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 TSPAN6O43657 245 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 CBFA2T3O75081 653 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 NDUFS2O75306 463 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 MOSPD3O75425 235 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 MTX2O75431 263 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 JRKO75564 520 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 PPM1BO75688 479 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 CLPXO76031 633 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 CA3P07451 260 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 HTR1AP08908 422 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 ANXA4P09525 319 aaPredicted RBP4.72□□□□□ -1.65
SF3B6-202ENST00000478050 ELFN1P0C7U0 828 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 MYOGP15173 224 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 CSF2RAP15509 400 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 CD22P20273 847 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 AGXTP21549 392 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 PCMT1P22061 227 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 IDSP22304 550 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms