RNA–Protein interactions for RNA: ENST00000477937.2

HDAC7-222, Transcript of histone deacetylase 7, human

TSL 5

Gene HDAC7, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC7-222	ENST00000477937	PTPMT1	Q8WUK0	201 aa	Predicted RBP	12.86	□□□□□ -0.35
HDAC7-222	ENST00000477937	MTBP	Q96DY7	904 aa		12.86	□□□□□ -0.35
HDAC7-222	ENST00000477937	RHOXF2	Q9BQY4	288 aa		12.86	□□□□□ -0.35
HDAC7-222	ENST00000477937	NTMT1	Q9BV86	223 aa		12.86	□□□□□ -0.35
HDAC7-222	ENST00000477937	SORBS1	Q9BX66	1292 aa	Known RBP	12.86	□□□□□ -0.35
HDAC7-222	ENST00000477937	MRPL46	Q9H2W6	279 aa	Known RBP	12.86	□□□□□ -0.35
HDAC7-222	ENST00000477937	RPF2	Q9H7B2	306 aa	Known RBP	12.86	□□□□□ -0.35
HDAC7-222	ENST00000477937	PHF11	Q9UIL8	331 aa		12.86	□□□□□ -0.35
HDAC7-222	ENST00000477937	ZNF223	Q9UK11	482 aa	Predicted RBP	12.86	□□□□□ -0.35
HDAC7-222	ENST00000477937	PCTP	Q9UKL6	214 aa		12.86	□□□□□ -0.35
HDAC7-222	ENST00000477937	YARS2	Q9Y2Z4	477 aa	Known RBP	12.86	□□□□□ -0.35
HDAC7-222	ENST00000477937	UTP20	O75691	2785 aa	Known RBP	12.85	□□□□□ -0.35
HDAC7-222	ENST00000477937	CROCC	Q5TZA2	2017 aa		12.85	□□□□□ -0.35
HDAC7-222	ENST00000477937	RIPK2	O43353	540 aa		12.85	□□□□□ -0.35
HDAC7-222	ENST00000477937	NME2P1	O60361	137 aa		12.85	□□□□□ -0.35
HDAC7-222	ENST00000477937	COX7A2	P14406	83 aa		12.85	□□□□□ -0.35
HDAC7-222	ENST00000477937	NME2	P22392	152 aa		12.85	□□□□□ -0.35
HDAC7-222	ENST00000477937	BUD31	P41223	144 aa	Predicted RBP	12.85	□□□□□ -0.35
HDAC7-222	ENST00000477937	SSR4	P51571	173 aa		12.85	□□□□□ -0.35
HDAC7-222	ENST00000477937	NEK2	P51955	445 aa		12.85	□□□□□ -0.35
HDAC7-222	ENST00000477937	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	12.85	□□□□□ -0.35
HDAC7-222	ENST00000477937	KRTCAP3	Q53RY4	240 aa		12.85	□□□□□ -0.35
HDAC7-222	ENST00000477937	C1QL3	Q5VWW1	255 aa		12.85	□□□□□ -0.35
HDAC7-222	ENST00000477937	TTC19	Q6DKK2	380 aa	Predicted RBP	12.85	□□□□□ -0.35
HDAC7-222	ENST00000477937	HSDL2	Q6YN16	418 aa		12.85	□□□□□ -0.35
HDAC7-222	ENST00000477937	TIFAB	Q6ZNK6	161 aa		12.85	□□□□□ -0.35
HDAC7-222	ENST00000477937	MAMDC2	Q7Z304	686 aa	Predicted RBP	12.85	□□□□□ -0.35
HDAC7-222	ENST00000477937	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	12.85	□□□□□ -0.35
HDAC7-222	ENST00000477937	FJX1	Q86VR8	437 aa		12.85	□□□□□ -0.35
HDAC7-222	ENST00000477937	CNPY4	Q8N129	248 aa		12.85	□□□□□ -0.35
HDAC7-222	ENST00000477937	OR52B6	Q8NGF0	335 aa		12.85	□□□□□ -0.35
HDAC7-222	ENST00000477937	WDR20	Q8TBZ3	569 aa		12.85	□□□□□ -0.35
HDAC7-222	ENST00000477937	TANK	Q92844	425 aa		12.85	□□□□□ -0.35
HDAC7-222	ENST00000477937	RELT	Q969Z4	430 aa		12.85	□□□□□ -0.35
HDAC7-222	ENST00000477937	ANKRD9	Q96BM1	317 aa	Predicted RBP	12.85	□□□□□ -0.35
HDAC7-222	ENST00000477937	MTFMT	Q96DP5	389 aa	Known RBP	12.85	□□□□□ -0.35
HDAC7-222	ENST00000477937	FRMD6	Q96NE9	622 aa		12.85	□□□□□ -0.35
HDAC7-222	ENST00000477937	CDK15	Q96Q40	435 aa		12.85	□□□□□ -0.35
HDAC7-222	ENST00000477937	OR8D2	Q9GZM6	311 aa		12.85	□□□□□ -0.35
HDAC7-222	ENST00000477937	LYAR	Q9NX58	379 aa	Known RBP	12.85	□□□□□ -0.35
HDAC7-222	ENST00000477937	PPT2	Q9UMR5	302 aa		12.85	□□□□□ -0.35
HDAC7-222	ENST00000477937	TRGV8	A0A0C4DH27	118 aa		12.84	□□□□□ -0.35
HDAC7-222	ENST00000477937	C17orf105	B2RV13	164 aa		12.84	□□□□□ -0.35
HDAC7-222	ENST00000477937	KLRC4-KLRK1	H3BQV0	150 aa		12.84	□□□□□ -0.35
HDAC7-222	ENST00000477937	PROM1	O43490	865 aa		12.84	□□□□□ -0.35
HDAC7-222	ENST00000477937	DYRK3	O43781	588 aa		12.84	□□□□□ -0.35
HDAC7-222	ENST00000477937	FGF17	O60258	216 aa		12.84	□□□□□ -0.35
HDAC7-222	ENST00000477937	PRKN	O60260	465 aa	Predicted RBP	12.84	□□□□□ -0.35
HDAC7-222	ENST00000477937	FAM153B	P0C7A2	387 aa		12.84	□□□□□ -0.35
HDAC7-222	ENST00000477937	GCA	P28676	217 aa		12.84	□□□□□ -0.35
HDAC7-222	ENST00000477937	BSG	P35613	385 aa		12.84	□□□□□ -0.35
HDAC7-222	ENST00000477937	TNFRSF17	Q02223	184 aa		12.84	□□□□□ -0.35
HDAC7-222	ENST00000477937	ID2	Q02363	134 aa		12.84	□□□□□ -0.35
HDAC7-222	ENST00000477937	FAM153C	Q494X1	144 aa		12.84	□□□□□ -0.35
HDAC7-222	ENST00000477937	TEX35	Q5T0J7	233 aa		12.84	□□□□□ -0.35
HDAC7-222	ENST00000477937	C10orf62	Q5T681	223 aa	Predicted RBP	12.84	□□□□□ -0.35
HDAC7-222	ENST00000477937	FRG2	Q64ET8	278 aa		12.84	□□□□□ -0.35
HDAC7-222	ENST00000477937	CYP20A1	Q6UW02	462 aa		12.84	□□□□□ -0.35
HDAC7-222	ENST00000477937	MILR1	Q7Z6M3	343 aa		12.84	□□□□□ -0.35
HDAC7-222	ENST00000477937	ZNF227	Q86WZ6	799 aa		12.84	□□□□□ -0.35
HDAC7-222	ENST00000477937	OR4N5	Q8IXE1	308 aa		12.84	□□□□□ -0.35
HDAC7-222	ENST00000477937	CYP4Z2P	Q8N1L4	340 aa		12.84	□□□□□ -0.35
HDAC7-222	ENST00000477937	OR8K3	Q8NH51	312 aa		12.84	□□□□□ -0.35
HDAC7-222	ENST00000477937	SLC2A12	Q8TD20	617 aa		12.84	□□□□□ -0.35
HDAC7-222	ENST00000477937	RBM18	Q96H35	190 aa	Known RBP	12.84	□□□□□ -0.35
HDAC7-222	ENST00000477937	GPR137	Q96N19	417 aa		12.84	□□□□□ -0.35
HDAC7-222	ENST00000477937	NSUN5	Q96P11	429 aa	Known RBP	12.84	□□□□□ -0.35
HDAC7-222	ENST00000477937	DGAT2	Q96PD7	388 aa		12.84	□□□□□ -0.35
HDAC7-222	ENST00000477937	FRG2B	Q96QU4	278 aa		12.84	□□□□□ -0.35
HDAC7-222	ENST00000477937	SERPINI1	Q99574	410 aa		12.84	□□□□□ -0.35
HDAC7-222	ENST00000477937	DDX31	Q9H8H2	851 aa	Known RBP	12.84	□□□□□ -0.35
HDAC7-222	ENST00000477937	LIN28A	Q9H9Z2	209 aa	Known RBP	12.84	□□□□□ -0.35
HDAC7-222	ENST00000477937	ZBTB26	Q9HCK0	441 aa		12.84	□□□□□ -0.35
HDAC7-222	ENST00000477937	MYOT	Q9UBF9	498 aa		12.84	□□□□□ -0.35
HDAC7-222	ENST00000477937	KLF13	Q9Y2Y9	288 aa	Predicted RBP	12.84	□□□□□ -0.35
HDAC7-222	ENST00000477937	ATG4B	Q9Y4P1	393 aa		12.84	□□□□□ -0.35
HDAC7-222	ENST00000477937	SPTAN1	Q13813	2472 aa	Known RBP	12.83	□□□□□ -0.36
HDAC7-222	ENST00000477937	IQANK1	A0A1B0GTG1	560 aa		12.83	□□□□□ -0.36
HDAC7-222	ENST00000477937	TMEM200C	A6NKL6	621 aa		12.83	□□□□□ -0.36
HDAC7-222	ENST00000477937		A8MVJ9	347 aa		12.83	□□□□□ -0.36
HDAC7-222	ENST00000477937	NPIPA5	E9PKD4	350 aa		12.83	□□□□□ -0.36
HDAC7-222	ENST00000477937	ASNA1	O43681	348 aa		12.83	□□□□□ -0.36
HDAC7-222	ENST00000477937	ZG16	O60844	167 aa		12.83	□□□□□ -0.36
HDAC7-222	ENST00000477937	OR2J2	O76002	312 aa		12.83	□□□□□ -0.36
HDAC7-222	ENST00000477937	WISP2	O76076	250 aa		12.83	□□□□□ -0.36
HDAC7-222	ENST00000477937	ETHE1	O95571	254 aa		12.83	□□□□□ -0.36
HDAC7-222	ENST00000477937	CLDN1	O95832	211 aa		12.83	□□□□□ -0.36
HDAC7-222	ENST00000477937	FAM58BP	P0C7Q3	252 aa		12.83	□□□□□ -0.36
HDAC7-222	ENST00000477937	TAC1	P20366	129 aa		12.83	□□□□□ -0.36
HDAC7-222	ENST00000477937	STT3A	P46977	705 aa		12.83	□□□□□ -0.36
HDAC7-222	ENST00000477937	CASP6	P55212	293 aa		12.83	□□□□□ -0.36
HDAC7-222	ENST00000477937	HNRNPH2	P55795	449 aa	Known RBP	12.83	□□□□□ -0.36
HDAC7-222	ENST00000477937	RNF4	P78317	190 aa		12.83	□□□□□ -0.36
HDAC7-222	ENST00000477937	IGLV3-21	P80748	117 aa	Predicted RBP	12.83	□□□□□ -0.36
HDAC7-222	ENST00000477937	FOLH1	Q04609	750 aa		12.83	□□□□□ -0.36
HDAC7-222	ENST00000477937	IFT88	Q13099	833 aa		12.83	□□□□□ -0.36
HDAC7-222	ENST00000477937	SLC29A2	Q14542	456 aa		12.83	□□□□□ -0.36
HDAC7-222	ENST00000477937	C18orf63	Q68DL7	685 aa		12.83	□□□□□ -0.36
HDAC7-222	ENST00000477937	HIST2H2BC	Q6DN03	193 aa		12.83	□□□□□ -0.36
HDAC7-222	ENST00000477937	MRM1	Q6IN84	353 aa	Known RBP	12.83	□□□□□ -0.36

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