RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.63■□□□□ 0.57
PDLIM1-202ENST00000477757 VWA5B2Q8N398 1253 aa18.63■□□□□ 0.57
PDLIM1-202ENST00000477757 LIX1Q8N485 282 aa18.63■□□□□ 0.57
PDLIM1-202ENST00000477757 SLC2A12Q8TD20 617 aa18.63■□□□□ 0.57
PDLIM1-202ENST00000477757 PAQR8Q8TEZ7 354 aa18.63■□□□□ 0.57
PDLIM1-202ENST00000477757 SMPDL3BQ92485 455 aa18.63■□□□□ 0.57
PDLIM1-202ENST00000477757 MS4A6EQ96DS6 147 aa18.63■□□□□ 0.57
PDLIM1-202ENST00000477757 QRFPRQ96P65 431 aa18.63■□□□□ 0.57
PDLIM1-202ENST00000477757 CSF3RQ99062 836 aa18.63■□□□□ 0.57
PDLIM1-202ENST00000477757 FAM167BQ9BTA0 163 aa18.63■□□□□ 0.57
PDLIM1-202ENST00000477757 JKAMPQ9P055 326 aa18.63■□□□□ 0.57
PDLIM1-202ENST00000477757 VTI1BQ9UEU0 232 aa18.63■□□□□ 0.57
PDLIM1-202ENST00000477757 MAD1L1Q9Y6D9 718 aa18.63■□□□□ 0.57
PDLIM1-202ENST00000477757 NBEAL1Q6ZS30 2694 aa18.63■□□□□ 0.57
PDLIM1-202ENST00000477757 A0A088AWK7 358 aa18.62■□□□□ 0.57
PDLIM1-202ENST00000477757 EEF1E1-BLOC1S5C9J1V9 151 aa18.62■□□□□ 0.57
PDLIM1-202ENST00000477757 EEF1E1O43324 174 aaKnown RBP18.62■□□□□ 0.57
PDLIM1-202ENST00000477757 B3GALT2O43825 422 aa18.62■□□□□ 0.57
PDLIM1-202ENST00000477757 ZNF10P21506 573 aaPredicted RBP18.62■□□□□ 0.57
PDLIM1-202ENST00000477757 CRYZQ08257 329 aaKnown RBP18.62■□□□□ 0.57
PDLIM1-202ENST00000477757 TBL3Q12788 808 aaKnown RBP18.62■□□□□ 0.57
PDLIM1-202ENST00000477757 ANKRD22Q5VYY1 191 aa18.62■□□□□ 0.57
PDLIM1-202ENST00000477757 NSUN5P2Q63ZY6 315 aa18.62■□□□□ 0.57
PDLIM1-202ENST00000477757 CAPN12Q6ZSI9 719 aa18.62■□□□□ 0.57
PDLIM1-202ENST00000477757 KIAA1191Q96A73 305 aa18.62■□□□□ 0.57
PDLIM1-202ENST00000477757 PIP5K1AQ99755 562 aa18.62■□□□□ 0.57
PDLIM1-202ENST00000477757 TRIM54Q9BYV2 358 aa18.62■□□□□ 0.57
PDLIM1-202ENST00000477757 TRIM5Q9C035 493 aa18.62■□□□□ 0.57
PDLIM1-202ENST00000477757 ZKSCAN5Q9Y2L8 839 aa18.62■□□□□ 0.57
PDLIM1-202ENST00000477757 C15orf38-AP3S2A0A0A6YYH1 394 aa18.61■□□□□ 0.57
PDLIM1-202ENST00000477757 SDR42E2A6NKP2 422 aa18.61■□□□□ 0.57
PDLIM1-202ENST00000477757 SMPD2O60906 423 aa18.61■□□□□ 0.57
PDLIM1-202ENST00000477757 CTNSO60931 367 aa18.61■□□□□ 0.57
PDLIM1-202ENST00000477757 ENO2P09104 434 aaPredicted RBP18.61■□□□□ 0.57
PDLIM1-202ENST00000477757 MLNP12872 115 aa18.61■□□□□ 0.57
PDLIM1-202ENST00000477757 TRPC1P48995 793 aa18.61■□□□□ 0.57
PDLIM1-202ENST00000477757 TERF1P54274 439 aa18.61■□□□□ 0.57
PDLIM1-202ENST00000477757 CDKN2DP55273 166 aa18.61■□□□□ 0.57
PDLIM1-202ENST00000477757 KCTD19Q17RG1 926 aaPredicted RBP18.61■□□□□ 0.57
PDLIM1-202ENST00000477757 HSP90AA5PQ58FG0 334 aa18.61■□□□□ 0.57
PDLIM1-202ENST00000477757 PRAMEF20Q5VT98 475 aa18.61■□□□□ 0.57
PDLIM1-202ENST00000477757 THOC6Q86W42 341 aaKnown RBP18.61■□□□□ 0.57
PDLIM1-202ENST00000477757 KLHDC8AQ8IYD2 350 aa18.61■□□□□ 0.57
PDLIM1-202ENST00000477757 TXLNBQ8N3L3 684 aa18.61■□□□□ 0.57
PDLIM1-202ENST00000477757 SPACA9Q96E40 222 aaPredicted RBP18.61■□□□□ 0.57
PDLIM1-202ENST00000477757 Q96MF0 132 aa18.61■□□□□ 0.57
PDLIM1-202ENST00000477757 DACH2Q96NX9 599 aa18.61■□□□□ 0.57
PDLIM1-202ENST00000477757 WDR83Q9BRX9 315 aaKnown RBP18.61■□□□□ 0.57
PDLIM1-202ENST00000477757 BDH2Q9BUT1 245 aa18.61■□□□□ 0.57
PDLIM1-202ENST00000477757 ALOXE3Q9BYJ1 711 aa18.61■□□□□ 0.57
PDLIM1-202ENST00000477757 PRDM14Q9GZV8 571 aa18.61■□□□□ 0.57
PDLIM1-202ENST00000477757 XAB2Q9HCS7 855 aaKnown RBP18.61■□□□□ 0.57
PDLIM1-202ENST00000477757 COPS7AQ9UBW8 275 aa18.61■□□□□ 0.57
PDLIM1-202ENST00000477757 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.6■□□□□ 0.57
PDLIM1-202ENST00000477757 LRIT2A6NDA9 550 aa18.6■□□□□ 0.57
PDLIM1-202ENST00000477757 C17orf105B2RV13 164 aa18.6■□□□□ 0.57
PDLIM1-202ENST00000477757 SMAD7O15105 426 aaKnown RBP18.6■□□□□ 0.57
PDLIM1-202ENST00000477757 GUCA1CO95843 209 aa18.6■□□□□ 0.57
PDLIM1-202ENST00000477757 KCNJ1P48048 391 aa18.6■□□□□ 0.57
PDLIM1-202ENST00000477757 LIM2P55344 173 aa18.6■□□□□ 0.57
PDLIM1-202ENST00000477757 IL2P60568 153 aa18.6■□□□□ 0.57
PDLIM1-202ENST00000477757 ASPHQ12797 758 aa18.6■□□□□ 0.57
PDLIM1-202ENST00000477757 STX4Q12846 297 aa18.6■□□□□ 0.57
PDLIM1-202ENST00000477757 EFTUD2Q15029 972 aaKnown RBP eCLIP18.6■□□□□ 0.571e-6■■■■■ 31.1
PDLIM1-202ENST00000477757 PIGGQ5H8A4 983 aa18.6■□□□□ 0.57
PDLIM1-202ENST00000477757 RBM20Q5T481 1227 aaKnown RBP18.6■□□□□ 0.57
PDLIM1-202ENST00000477757 PRSS57Q6UWY2 283 aa18.6■□□□□ 0.57
PDLIM1-202ENST00000477757 LYPD8Q6UX82 237 aa18.6■□□□□ 0.57
PDLIM1-202ENST00000477757 PM20D2Q8IYS1 436 aa18.6■□□□□ 0.57
PDLIM1-202ENST00000477757 TTLQ8NG68 377 aa18.6■□□□□ 0.57
PDLIM1-202ENST00000477757 NUBPLQ8TB37 319 aa18.6■□□□□ 0.57
PDLIM1-202ENST00000477757 SLC22A8Q8TCC7 542 aa18.6■□□□□ 0.57
PDLIM1-202ENST00000477757 TIMP4Q99727 224 aa18.6■□□□□ 0.57
PDLIM1-202ENST00000477757 TSPY26PQ9H489 355 aa18.6■□□□□ 0.57
PDLIM1-202ENST00000477757 PROK2Q9HC23 129 aa18.6■□□□□ 0.57
PDLIM1-202ENST00000477757 DAPP1Q9UN19 280 aa18.6■□□□□ 0.57
PDLIM1-202ENST00000477757 KCNE2Q9Y6J6 123 aa18.6■□□□□ 0.57
PDLIM1-202ENST00000477757 ARID1AO14497 2285 aa18.6■□□□□ 0.57
PDLIM1-202ENST00000477757 MYOCOSA0A1B0GUC4 107 aa18.59■□□□□ 0.57
PDLIM1-202ENST00000477757 IL18BPO95998 194 aa18.59■□□□□ 0.57
PDLIM1-202ENST00000477757 CTSSP25774 331 aa18.59■□□□□ 0.57
PDLIM1-202ENST00000477757 CERS1P27544 350 aa18.59■□□□□ 0.57
PDLIM1-202ENST00000477757 OPRM1P35372 400 aa18.59■□□□□ 0.57
PDLIM1-202ENST00000477757 DUSP8Q13202 625 aa18.59■□□□□ 0.57
PDLIM1-202ENST00000477757 SERTAD2Q14140 314 aa18.59■□□□□ 0.57
PDLIM1-202ENST00000477757 RCN2Q14257 317 aa18.59■□□□□ 0.57
PDLIM1-202ENST00000477757 SF3B4Q15427 424 aaKnown RBP eCLIP18.59■□□□□ 0.57
PDLIM1-202ENST00000477757 ADPRMQ3LIE5 342 aa18.59■□□□□ 0.57
PDLIM1-202ENST00000477757 SBSNQ6UWP8 590 aa18.59■□□□□ 0.57
PDLIM1-202ENST00000477757 RASGEF1CQ8N431 466 aa18.59■□□□□ 0.57
PDLIM1-202ENST00000477757 C2CD4AQ8NCU7 369 aaPredicted RBP18.59■□□□□ 0.57
PDLIM1-202ENST00000477757 ZNF721Q8TF20 911 aa18.59■□□□□ 0.57
PDLIM1-202ENST00000477757 RUNDC3BQ96NL0 473 aa18.59■□□□□ 0.57
PDLIM1-202ENST00000477757 SERPINB12Q96P63 405 aa18.59■□□□□ 0.57
PDLIM1-202ENST00000477757 SERINC2Q96SA4 455 aa18.59■□□□□ 0.57
PDLIM1-202ENST00000477757 IARS2Q9NSE4 1012 aaKnown RBP18.59■□□□□ 0.57
PDLIM1-202ENST00000477757 CNIH4Q9P003 139 aa18.59■□□□□ 0.57
PDLIM1-202ENST00000477757 CHCHD2Q9Y6H1 151 aaPredicted RBP18.59■□□□□ 0.57
PDLIM1-202ENST00000477757 KIAA1549Q9HCM3 1950 aa18.59■□□□□ 0.57
PDLIM1-202ENST00000477757 SH3D21A4FU49 640 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms